prot_H-paniculata_contig1827.4459.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1827.4459.1
Unique Nameprot_H-paniculata_contig1827.4459.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length630
Homology
BLAST of mRNA_H-paniculata_contig1827.4459.1 vs. uniprot
Match: D7G2H6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2H6_ECTSI)

HSP 1 Score: 126 bits (317), Expect = 2.440e-26
Identity = 83/228 (36.40%), Postives = 115/228 (50.44%), Query Frame = 0
Query:  383 FSRLRFQARGLRVNSVVAKGGCGRTVRSCLAVSCLQVRGVESVGDYYDGHVVKANAVSFAQVRVAGSPINLHIR-SVRGDGNSPKRR------AEGDCK-----------AIAQRG--------------------------------VTSEEIVVGKADMVWSGSMHLGLLRMSKRLVRTIDHLVGVPSSPPPLKFTRSIHLVKGYFRCAFARVLADSKL---PPSR 557
            +SRL+ + RG+R++ VV K   GRT R+ +AVSC +V G ES+G+ Y  H+V    +SFAQVRVA  P+ L +    +  GN  + +      A GD +           A A RG                                V +E I++ + DM WSGS+H  LLR+S+RLV TIDHLVG+P    P++FTR + L   Y RCA + V     L   PPS+
Sbjct:  449 WSRLKLELRGVRMDKVVEKDSLGRTARATMAVSCKEVSGTESIGEEYCEHIVNLVGLSFAQVRVANVPLVLGLAPDAKATGNDTQAKPGGRNGATGDTEEVDDDGSGQPTAAATRGGDGHVATAASAAPVGGEGAIPCSPPPPAARGAVKAENIIIDRTDMAWSGSVHCMLLRLSQRLVLTIDHLVGLPPPXXPVEFTRRVLLRGAYLRCALSEVTEGRPLRSPPPSQ 676          
BLAST of mRNA_H-paniculata_contig1827.4459.1 vs. uniprot
Match: A0A6H5L9Y5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9Y5_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 1.450e-12
Identity = 55/138 (39.86%), Postives = 72/138 (52.17%), Query Frame = 0
Query:  477 AQRGVTSEEIVVGKADMVWSGSMHLGLLRMSKRLVRTIDHLVGVPSSPPPLKFTRSIHLVKGYFRCAFARVLAD----SKLPPSRFHGYASGSSERTVPWFHDRLDVRLDNLRFVVTKKMPAM-----TPADSSGGHK 605
            A+  V +E I++ + DM WSGS+H  LLR+S+RLV TIDHLVG P  P P++FTR + L   Y RCA + V       S LP  R     S SS  +           LD+L F    + PAM     +P +  GG K
Sbjct:  918 ARGAVKAEHIIIDRTDMAWSGSVHCMLLRLSQRLVSTIDHLVGFPPPPLPVEFTRRVLLRGAYLRCALSEVTEGRPLRSPLPSQRPLARTSRSSSSSFSSTSS-----LDDLSF----RQPAMEGGPRSPDNDHGGGK 1046          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1827.4459.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G2H6_ECTSI2.440e-2636.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L9Y5_9PHAE1.450e-1239.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1827contigH-paniculata_contig1827:4985..11357 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1827.4459.1mRNA_H-paniculata_contig1827.4459.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1827 4984..11357 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1827.4459.1 ID=prot_H-paniculata_contig1827.4459.1|Name=mRNA_H-paniculata_contig1827.4459.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=630bp
SSAAHVGDRTQSSPPPSPATHNNGRSINRFRRYSHTTGALPESEAQPQRS
AVGNRPRRSVITMAQEKSANNLPNPGSPPALPQRPQHLLTRKAAIRNVGA
SARTRSMSSQDPPPLPSCRLPRVSLPARAPPGPEVSSVPESSARSPRGHG
FKLDVSECRVDVEAVTGKIDEGLGGWLNLRGRWEAAEAARSVGRTDSLAS
SGMTTDVVSLTQHPCVRCFVSTVRVSIEEAMASETKEHNVGKTGQEARSG
PVRTAVRTAWFEIEAEGVTLQQVHSLYDGTPPPLVCLKMVRSLGALPEVL
HPVQDSHLRFKCERASIAIVEGIPLEVQEPSPDQCEKRSPSSRTSPSGST
VSPTSPVETSSSSPSWPIDPKSGPAKSATPAAFSRLRFQARGLRVNSVVA
KGGCGRTVRSCLAVSCLQVRGVESVGDYYDGHVVKANAVSFAQVRVAGSP
INLHIRSVRGDGNSPKRRAEGDCKAIAQRGVTSEEIVVGKADMVWSGSMH
LGLLRMSKRLVRTIDHLVGVPSSPPPLKFTRSIHLVKGYFRCAFARVLAD
SKLPPSRFHGYASGSSERTVPWFHDRLDVRLDNLRFVVTKKMPAMTPADS
SGGHKPVRLGRAGDLSATTVVAADAAAEIR
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