prot_H-paniculata_contig1822.4435.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1822.4435.1
Unique Nameprot_H-paniculata_contig1822.4435.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length156
Homology
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BLAST of mRNA_H-paniculata_contig1822.4435.1 vs. uniprot
Match: A0A6H5KN23_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN23_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 8.030e-13
Identity = 51/120 (42.50%), Postives = 61/120 (50.83%), Query Frame = 0 
Query:    8 RPRLATSSSLSLFGVASLKDEMGPWKVTDLEQAVCFRNKSVSEASQSVAPLLPTPAXXXXXXXXXXXXPLGSQQPRSREEDTDGPDPALWSLSNGRDTVGLKERVEASWRGDPQIPPTAR 127
            R  LA  + L L     L     P KV+DL  AV  R + V+ AS+SVA  LP P             P     P +   DTDGPDPALW+LS+G +T GL ERVE SW   P+  P AR
Sbjct:  228 RTLLAFGTCLQLPSFFFLLTPPLPLKVSDLNNAVARRTQVVAAASRSVA--LPQPPAAAGT-------PAAVSPPWALRGDTDGPDPALWTLSSGHETAGLAERVEGSWSSPPRQSPPAR 338
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1822.4435.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KN23_9PHAE8.030e-1342.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1822contigH-paniculata_contig1822:2252..3034 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1822.4435.1mRNA_H-paniculata_contig1822.4435.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1822 2251..3034 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1822.4435.1 ID=prot_H-paniculata_contig1822.4435.1|Name=mRNA_H-paniculata_contig1822.4435.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=156bp
AVVAAAERPRLATSSSLSLFGVASLKDEMGPWKVTDLEQAVCFRNKSVSE
ASQSVAPLLPTPATATATAAAAAAAPLGSQQPRSREEDTDGPDPALWSLS
NGRDTVGLKERVEASWRGDPQIPPTARLRAVARAMVAGAARVQGESKDVQ
GGGYGA
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