prot_H-paniculata_contig1818.4415.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1818.4415.1
Unique Nameprot_H-paniculata_contig1818.4415.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length107
Homology
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BLAST of mRNA_H-paniculata_contig1818.4415.1 vs. uniprot
Match: D8LNR7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNR7_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 3.160e-12
Identity = 52/113 (46.02%), Postives = 64/113 (56.64%), Query Frame = 0 
Query:    1 MRRGVATATXXXXXRALGFANRGARRARRPCMVEGTREGATIPPRGSLRAGPRISSA----EGRMLEDFLLFRSQAGAVAILAMQVRTAGSAAGA---CLELLEGDWDDDDGT 106
            MR G+ATA      RALGF  R ARR R PC   G          G   AGPR +S+    +GRM+E+F++ RSQ GA  +LA Q+R A  + G     LE +EGD DDDDGT
Sbjct:    1 MRVGLATA------RALGFVTRRARRGRGPCSQSGLHRTPNAAA-GPQAAGPRTASSSAASQGRMVEEFVMSRSQLGAATVLATQIRGAVCSVGGGDFSLE-VEGDGDDDDGT 105
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1818.4415.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LNR7_ECTSI3.160e-1246.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..106
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..11

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1818contigH-paniculata_contig1818:18107..20374 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1818.4415.1mRNA_H-paniculata_contig1818.4415.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1818 18027..21554 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1818.4415.1 ID=prot_H-paniculata_contig1818.4415.1|Name=mRNA_H-paniculata_contig1818.4415.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=107bp
MRRGVATATATATARALGFANRGARRARRPCMVEGTREGATIPPRGSLRA
GPRISSAEGRMLEDFLLFRSQAGAVAILAMQVRTAGSAAGACLELLEGDW
DDDDGT*
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