prot_H-paniculata_contig18146.4404.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig18146.4404.1
Unique Nameprot_H-paniculata_contig18146.4404.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length208
Homology
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BLAST of mRNA_H-paniculata_contig18146.4404.1 vs. uniprot
Match: A0A6H5KR97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR97_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 1.180e-32
Identity = 67/86 (77.91%), Postives = 72/86 (83.72%), Query Frame = 0 
Query:    1 AAKQQAAWTQQRMMAVSIVLDYHDSIDGPIPSFLGGGAGINTVEWLDLGRSNLTGNIPDNLGTLPNLRRAKNESMRRSQKLYLAGN 86
            A +Q AAWTQQRMMAVSIVLDYHDSIDGPIP+FLGGG G+NTVEWLDLGRSNLTG+IP+NLGTLPNLR           KLYLAGN
Sbjct:  188 ALEQNAAWTQQRMMAVSIVLDYHDSIDGPIPAFLGGGGGVNTVEWLDLGRSNLTGSIPENLGTLPNLR-----------KLYLAGN 262
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BLAST of mRNA_H-paniculata_contig18146.4404.1 vs. uniprot
Match: D8LEE5_ECTSI (Leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEE5_ECTSI)

HSP 1 Score: 115 bits (289), Expect = 3.140e-28
Identity = 59/74 (79.73%), Postives = 62/74 (83.78%), Query Frame = 0 
Query:   13 MMAVSIVLDYHDSIDGPIPSFLGGGAGINTVEWLDLGRSNLTGNIPDNLGTLPNLRRAKNESMRRSQKLYLAGN 86
            MMAVSIVLDYHDSIDGPIPSFLGGG G+NTVEWLDLGRSNLTG+IP+NLGTLPNLR           KLYLAGN
Sbjct:    1 MMAVSIVLDYHDSIDGPIPSFLGGGGGVNTVEWLDLGRSNLTGSIPENLGTLPNLR-----------KLYLAGN 63
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18146.4404.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KR97_9PHAE1.180e-3277.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LEE5_ECTSI3.140e-2879.73Leucine rich repeat protein n=1 Tax=Ectocarpus sil... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 16..117
e-value: 7.7E-19
score: 69.7
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 118..202
e-value: 7.7E-23
score: 82.8
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 79..136
e-value: 4.9E-8
score: 32.6
NoneNo IPR availablePANTHERPTHR27006:SF119LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEINcoord: 126..201
NoneNo IPR availablePANTHERPTHR27006FAMILY NOT NAMEDcoord: 18..177
NoneNo IPR availablePANTHERPTHR27006FAMILY NOT NAMEDcoord: 126..201
NoneNo IPR availablePANTHERPTHR27006:SF119LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEINcoord: 18..177
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 39..199

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig18146contigH-paniculata_contig18146:423..4966 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig18146.4404.1mRNA_H-paniculata_contig18146.4404.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig18146 423..4966 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig18146.4404.1 ID=prot_H-paniculata_contig18146.4404.1|Name=mRNA_H-paniculata_contig18146.4404.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=208bp
AAKQQAAWTQQRMMAVSIVLDYHDSIDGPIPSFLGGGAGINTVEWLDLGR
SNLTGNIPDNLGTLPNLRRAKNESMRRSQKLYLAGNRLVGNIPSSIGNIV
TLTDLSLAGNELSGPIPESFGNLTLLRYLSLRDNKLSGPIPAGLGNLVNL
EELWLNANAIEGAIPATLGNMVTACKIFLNNNEISGCIPSTLGNLASLRV
SRKDIAV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt