prot_H-paniculata_contig1813.4396.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1813.4396.1
Unique Nameprot_H-paniculata_contig1813.4396.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length297
Homology
BLAST of mRNA_H-paniculata_contig1813.4396.1 vs. uniprot
Match: A0A6H5KTN6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTN6_9PHAE)

HSP 1 Score: 240 bits (612), Expect = 3.520e-72
Identity = 156/315 (49.52%), Postives = 184/315 (58.41%), Query Frame = 0
Query:    1 MGGGDRMSTTAFLAAMGCKGNSQISALPQGLLQALALLDQNVGEVSERGSLSGVVDSLVEWFLTESMAPRSADGDDLALSLRAARWLASRFLECDAAA-------------------AAITTLTYQQKPWQKHEHATGGSLRGDYDNGDYDDSKIDNADECLQLLLELAAGRLGTGVDGLHSSLSLMGGDFRGLRSMRVRRAFAAALRAHLRTVQVDAVFRFDTPKRLGGSSKSGTGVAGQVGGAGVAATVQGVLSPGRLALPPISNWASFRKYTVTMWVRPNPVDGAGFEPVTLFRFRNGEGIGVEAVLSGGGA 296
            MGGG  M     L+ +      Q S++P  LLQAL  LDQ +GE +ER +L GVVDSLVEWFL ES APR+ADGDDL L LRAA WLA RF    + +                   A  TT    + P         G  +G      +  +  D+ +E LQLLLEL AGRLG GVDG+  SLSLM GD  G +SMRVRRAFA+ALRAHL TV++D+VFRFD PK    S   G                  V SPGRLALPP+ +WASFRKYTVTMWVR +P   +G +  TLFRFRN EG+GVEA LSG  A
Sbjct:    1 MGGGHGMGAEMELSLVAAL---QASSMPASLLQALRTLDQELGEETEREALDGVVDSLVEWFLHESRAPRTADGDDLGLCLRAACWLAPRFANLSSCSDPRPQAVDETADELNNGSQATTTTTATPETPAPGEASEDLGERQG------HTTAARDDGEEPLQLLLELGAGRLGAGVDGIRKSLSLMAGDL-GPKSMRVRRAFASALRAHLGTVRLDSVFRFDAPKAGPPSGNGGV-----------------VSSPGRLALPPMLSWASFRKYTVTMWVRLDPAY-SGADAATLFRFRNAEGVGVEATLSGAAA 287          
BLAST of mRNA_H-paniculata_contig1813.4396.1 vs. uniprot
Match: D8LFY6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFY6_ECTSI)

HSP 1 Score: 201 bits (511), Expect = 1.860e-58
Identity = 133/278 (47.84%), Postives = 156/278 (56.12%), Query Frame = 0
Query:    1 MGGGDRMSTTAFLAAMGCKGNSQISALPQGLLQALALLDQNVGEVSERGSLSGVVDSLVEWFLTESMAPRSADGDDLALSLRAARWLASRFLEC-------------------DAAAAAITTLTYQQKPWQKHEHATGGSLRGDYDNGDYDDSKIDNADECLQLLLELAAGRLGTGVDGLHSSLSLMGGDFRGLRSMRVRRAFAAALRAHLRTVQVDAVFRFDTPKRLGGSSKSGTGVAGQVGGAGVAATVQGVLSPGRLALPPISNWASFRKYTVTM 259
            MGGG  M     L+ +      Q S++P  LLQAL  LDQ +GE +ER +L GVVDSLVEWFL ES APR+ADGDDL L LRAA WLA RF +                    D + AA  T    + P         G  +G         +  D+ +E LQLLLEL AGRLG GVDG+H SLSLM G   GLRSMRVRRAFA+ALRAHL TV+VD+VFRFD PK    S   G                  V SPGRLALPP+ +WASFRK  + +
Sbjct:    1 MGGGHGMGAEMELSLVAAL---QASSMPASLLQALRTLDQELGEETEREALDGVVDSLVEWFLHESRAPRTADGDDLGLCLRAACWLAPRFADLSSSGSPRPQAADETAAALNDGSQAATATTATPETPAPGEAREDLGERQGQTT------AARDDGEEPLQLLLELGAGRLGAGVDGIHRSLSLMAGALLGLRSMRVRRAFASALRAHLGTVRVDSVFRFDAPKAGPPSGNGGV-----------------VSSPGRLALPPMLSWASFRKREIVV 252          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1813.4396.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KTN6_9PHAE3.520e-7249.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFY6_ECTSI1.860e-5847.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..18
score: 5.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1813contigH-paniculata_contig1813:15961..21378 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1813.4396.1mRNA_H-paniculata_contig1813.4396.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1813 15848..21378 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1813.4396.1 ID=prot_H-paniculata_contig1813.4396.1|Name=mRNA_H-paniculata_contig1813.4396.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=297bp
MGGGDRMSTTAFLAAMGCKGNSQISALPQGLLQALALLDQNVGEVSERGS
LSGVVDSLVEWFLTESMAPRSADGDDLALSLRAARWLASRFLECDAAAAA
ITTLTYQQKPWQKHEHATGGSLRGDYDNGDYDDSKIDNADECLQLLLELA
AGRLGTGVDGLHSSLSLMGGDFRGLRSMRVRRAFAAALRAHLRTVQVDAV
FRFDTPKRLGGSSKSGTGVAGQVGGAGVAATVQGVLSPGRLALPPISNWA
SFRKYTVTMWVRPNPVDGAGFEPVTLFRFRNGEGIGVEAVLSGGGAG
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