mRNA_H-paniculata_contig18085.4369.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig18085.4369.1 vs. uniprot
Match: A0A6H5KZ46_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ46_9PHAE) HSP 1 Score: 244 bits (623), Expect = 9.860e-73 Identity = 118/149 (79.19%), Postives = 130/149 (87.25%), Query Frame = 3
Query: 390 SEERVLLQQVTGELERYQGLYITPEELDTREVLPWWRQQGKKMFPSLAPVAQQVLGNQASASQVERDFSGCGNLLVPNRSRIDTYWVEMVMFLYVNFKHIPALKDIPMIAAKDIRACLPARFTGGDADLAAAEAAFDVVNNTANSDIGL 836
SE++VL+QQV+ ELER+Q LY+T EELDTREVLPWWR G+KMFP LAPVAQQVLGNQA A+QVERDFS C NLL NRSRIDTYWVEMVMFL+VN+K IPA KDIPMIAAKDIR CLP RF GGDADLAAAEA FDV+ NT NSDIG+
Sbjct: 472 SEDKVLMQQVSQELERFQALYMTAEELDTREVLPWWRNTGRKMFPCLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIRTCLPPRFNGGDADLAAAEATFDVIENTNNSDIGV 620
BLAST of mRNA_H-paniculata_contig18085.4369.1 vs. uniprot
Match: A0A6H5KSA7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSA7_9PHAE) HSP 1 Score: 229 bits (583), Expect = 1.670e-72 Identity = 109/145 (75.17%), Postives = 120/145 (82.76%), Query Frame = 3
Query: 402 VLLQQVTGELERYQGLYITPEELDTREVLPWWRQQGKKMFPSLAPVAQQVLGNQASASQVERDFSGCGNLLVPNRSRIDTYWVEMVMFLYVNFKHIPALKDIPMIAAKDIRACLPARFTGGDADLAAAEAAFDVVNNTANSDIGL 836
VL+Q V+ E+ERY LYIT EELDTRE+LPWWRQ G+K FP LAPVAQQV GNQA A+QVERDFSGC NLL NRSR+DTYWVEMVMFL+ NF+HIP KDIPMIAAKDI CLP RF GGDADLAAAEAAFDV+ NT D+ L
Sbjct: 3 VLMQHVSQEIERYHSLYITAEELDTREILPWWRQTGRKTFPYLAPVAQQVFGNQAGAAQVERDFSGCANLLTRNRSRMDTYWVEMVMFLHANFEHIPGFKDIPMIAAKDIHTCLPPRFNGGDADLAAAEAAFDVIKNTEIGDVDL 147
BLAST of mRNA_H-paniculata_contig18085.4369.1 vs. uniprot
Match: A0A6H5JVT2_9PHAE (Dimer_Tnp_hAT domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVT2_9PHAE) HSP 1 Score: 228 bits (580), Expect = 5.660e-71 Identity = 109/136 (80.15%), Postives = 119/136 (87.50%), Query Frame = 3
Query: 429 LERYQGLYITPEELDTREVLPWWRQQGKKMFPSLAPVAQQVLGNQASASQVERDFSGCGNLLVPNRSRIDTYWVEMVMFLYVNFKHIPALKDIPMIAAKDIRACLPARFTGGDADLAAAEAAFDVVNNTANSDIGL 836
++R+Q LY+T EELDTREVLPWWR G+KMFP LAPVAQQVLGNQA A+QVERDFS C NLL NRSRIDTYWVEMVMFL+VN+K IPA KDIPMIAAKDIR CLP RF GGDADLAAAEAAFDV+ NT NSDIG+
Sbjct: 87 IDRFQALYMTAEELDTREVLPWWRNTGRKMFPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIRTCLPPRFNGGDADLAAAEAAFDVIENTNNSDIGV 222
BLAST of mRNA_H-paniculata_contig18085.4369.1 vs. uniprot
Match: A0A6H5JZQ5_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ5_9PHAE) HSP 1 Score: 205 bits (522), Expect = 4.930e-61 Identity = 101/143 (70.63%), Postives = 116/143 (81.12%), Query Frame = 3
Query: 390 SEERVLLQQVTGELERYQGLYITPEELDTREVLPWWRQQGKKMFPSLAPVAQQVLGNQASASQVERDFSGCGNLLVPNRSRIDTYWVEMVMFLYVNFKHIPALKDIPMIAAKDIRACLPARFTGGDADLAAAEAAFDVVNNTA 818
SE+R L + V GELE Y+ L+I +ELD REVLPWW++ GK +FP LAPVAQQV GNQA+ SQVERDFSG G LL PNRSR+DTYWVE+VMFL NF HIP LK IPM+AAK+IR+CLPARF G DADL AAEA FDV+ NTA
Sbjct: 161 SEDRKLGEVVAGELEHYKSLFIKADELDCREVLPWWKRTGKNIFPHLAPVAQQVFGNQAAVSQVERDFSGVGILLAPNRSRMDTYWVEIVMFLNANFAHIPPLKQIPMVAAKNIRSCLPARFHGRDADLMAAEAIFDVLMNTA 303
BLAST of mRNA_H-paniculata_contig18085.4369.1 vs. uniprot
Match: A0A6H5KP16_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP16_9PHAE) HSP 1 Score: 179 bits (453), Expect = 2.060e-53 Identity = 88/107 (82.24%), Postives = 93/107 (86.92%), Query Frame = 3
Query: 516 MFPSLAPVAQQVLGNQASASQVERDFSGCGNLLVPNRSRIDTYWVEMVMFLYVNFKHIPALKDIPMIAAKDIRACLPARFTGGDADLAAAEAAFDVVNNTANSDIGL 836
MFP LAPVAQQVLGNQA A+QVERDFS C NLL NRSRIDTYWVEMVMFL+VN+K IPA KDIPMIAAKDIR CLP RF GGDADLAAAEAAFDV+ N NSDIG+
Sbjct: 1 MFPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIRTCLPPRFNGGDADLAAAEAAFDVIENINNSDIGV 107
BLAST of mRNA_H-paniculata_contig18085.4369.1 vs. uniprot
Match: A0A6H5KBM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBM2_9PHAE) HSP 1 Score: 178 bits (452), Expect = 1.940e-50 Identity = 95/149 (63.76%), Postives = 107/149 (71.81%), Query Frame = 3
Query: 390 SEERVLLQQVTGELERYQGLYITPEELDTREVLPWWRQQGKKMFPSLAPVAQQVLGNQASASQVERDFSGCGNLLVPNRSRIDTYWVEMVMFLYVNFKHIPALKDIPMIAAKDIRACLPARFTGGDADLAAAEAAFDVVNNTANSDIGL 836
SE++VL+QQV+ ELER+Q LY+T A +VLGNQA A+QVERDFS C NLL NRSRIDTYWVEMVMFL+VN+K IPA KDIPMIAAKDIR CLP RF GGDADLAAAEAAFDV+ NT NSDIG+
Sbjct: 202 SEDKVLMQQVSQELERFQALYMT---------------------------AGEVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKCIPAFKDIPMIAAKDIRTCLPPRFNGGDADLAAAEAAFDVIENTNNSDIGV 323
BLAST of mRNA_H-paniculata_contig18085.4369.1 vs. uniprot
Match: A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE) HSP 1 Score: 155 bits (391), Expect = 1.020e-38 Identity = 78/145 (53.79%), Postives = 97/145 (66.90%), Query Frame = 3
Query: 411 QQVTGELERYQGLYITPEELDTREVLPWWRQQGKKMFPSLAPVAQQVLGNQASASQVERDFSGCGNLLVPNRSRIDTYWVEMVMFLYVNFKHIPALKDIPMIAAKDIRACLPARFTGGDADLAAAEAAFDVVNNTA---NSDIGL 836
Q+V E+ RY+G+++T +L EVL +W G+ FP+L VAQQ G+Q SA+ VERDFSGCG LVPNRSR++ YWVEMVMFL NFK IP +IP I +KDIR CLPA+F G D DL +AE A D + N D GL
Sbjct: 708 QEVANEIMRYKGVFMTSNDLHPTEVLSYWATTGRHSFPALKHVAQQTFGSQPSAAPVERDFSGCGLFLVPNRSRVEEYWVEMVMFLNANFKFIPKYDNIPSIDSKDIRKCLPAKFKGTDEDLLSAEMALDPLRNNTPPGEDDTGL 852
BLAST of mRNA_H-paniculata_contig18085.4369.1 vs. uniprot
Match: A0A6H5JN28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN28_9PHAE) HSP 1 Score: 144 bits (362), Expect = 2.890e-38 Identity = 79/141 (56.03%), Postives = 89/141 (63.12%), Query Frame = 3
Query: 414 QVTGELERYQGLYITPEELDTREVLPWWRQQGKKMFPSLAPVAQQVLGNQASASQVERDFSGCGNLLVPNRSRIDTYWVEMVMFLYVNFKHIPALKDIPMIAAKDIRACLPARFTGGDADLAAAEAAFDVVNNTANSDIGL 836
+V+ E+ERY LYIT EE G + +A VERDFSGC NLL NRSR+DTYWVEMVMFL+ NF+HIP KDIPMIAAKDI CLP RF GDADLAAAEAAFDV+ NT D+GL
Sbjct: 111 KVSQEIERYHLLYITAEE-----------------------------GYERAA--VERDFSGCANLLTRNRSRMDTYWVEMVMFLHANFEHIPGFKDIPMIAAKDIHTCLPPRFNRGDADLAAAEAAFDVIENTETGDVGL 220
BLAST of mRNA_H-paniculata_contig18085.4369.1 vs. uniprot
Match: A0A6H5JB08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB08_9PHAE) HSP 1 Score: 134 bits (336), Expect = 1.190e-31 Identity = 64/122 (52.46%), Postives = 88/122 (72.13%), Query Frame = 3
Query: 411 QQVTGELERYQGLYITPEELDTREVLPWWRQQGKKMFPSLAPVAQQVLGNQASASQVERDFSGCGNLLVPNRSRIDTYWVEMVMFLYVNFKHIPALKDIPMIAAKDIRACLPARFTGGDADL 776
++V+GE+ RY+G+++ P +L +VL +W + GK+MFPSL VAQQ G+QASA+Q+ERDFS CG NRSR + YW+EMVM L N++ IP KDIP I +KDIR CLPA+++ G L
Sbjct: 468 EEVSGEIIRYKGVFMKPIDLPPSDVLAYWNKVGKQMFPSLKYVAQQTFGSQASAAQIERDFSHCGLFSTGNRSRAEEYWLEMVMVLKGNYELIPDYKDIPSIDSKDIRKCLPAKYSVGGLQL 589
BLAST of mRNA_H-paniculata_contig18085.4369.1 vs. uniprot
Match: A0A6H5JB56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB56_9PHAE) HSP 1 Score: 129 bits (323), Expect = 1.470e-29 Identity = 69/138 (50.00%), Postives = 87/138 (63.04%), Query Frame = 3
Query: 390 SEERVLLQQVTGELERYQGLYITPEELDTREVLPWWRQQGKKMFPSLAPVAQQVLGNQASASQVERDFSGCGNLLVPNRSRIDTYWVEMVMFLYVNFKHIPALKDIPMIAAKDIRACLPARFTGGDADLAAAEAAFDV 803
+E++VL+QQVTGELERYQ L++ EE VERDFS C +LL +RSR+DTYWVEM+MFL+ NFKH+P K+IP+I +K+IR LPARFTG DA+LAAAEAAFD+
Sbjct: 1175 AEDQVLVQQVTGELERYQALFVKAEE-------------------------------------VERDFSKCADLLTRHRSRVDTYWVEMIMFLHANFKHVPDFKEIPVIESKNIRKALPARFTGVDAELAAAEAAFDM 1275 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18085.4369.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig18085.4369.1 >prot_H-paniculata_contig18085.4369.1 ID=prot_H-paniculata_contig18085.4369.1|Name=mRNA_H-paniculata_contig18085.4369.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=108bp MFPSLAPVAQQVLGNQASASQVERDFSGCGNLLVPNRSRIDTYWVEMVMFback to top mRNA from alignment at H-paniculata_contig18085:1141..2280+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig18085.4369.1 ID=mRNA_H-paniculata_contig18085.4369.1|Name=mRNA_H-paniculata_contig18085.4369.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1140bp|location=Sequence derived from alignment at H-paniculata_contig18085:1141..2280+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig18085:1141..2280+ >mRNA_H-paniculata_contig18085.4369.1 ID=mRNA_H-paniculata_contig18085.4369.1|Name=mRNA_H-paniculata_contig18085.4369.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=648bp|location=Sequence derived from alignment at H-paniculata_contig18085:1141..2280+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |