prot_H-paniculata_contig18054.4359.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig18054.4359.1
Unique Nameprot_H-paniculata_contig18054.4359.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length227
Homology
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BLAST of mRNA_H-paniculata_contig18054.4359.1 vs. uniprot
Match: D8LB77_ECTSI (SHR-BD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB77_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 7.550e-22
Identity = 70/151 (46.36%), Postives = 85/151 (56.29%), Query Frame = 0 
Query:   78 VRPQLVLLGDLSRAVGHGEAALLCASLLRDEEGAVGILRNASQTLRVGYGQFVSDLQGQLQKAHFKAREHTTGPSCVGSITSTPSPS---SFAETKPQQLAGAGEQGMKAR-TGSGGTPEGLVDEVMGGHVEAVALHGLQQFGGSCVRSLA 224
            VRPQL LLGDLSRAVGH EAAL+ ASLLRD  GA  IL +ASQ LRVGYG F+++L  Q++ A   A         V +  + P P    + A  +  + AG    G   R  G  G P        G    A+AL GLQ+FGG CVR+LA
Sbjct: 2935 VRPQLELLGDLSRAVGHAEAALVSASLLRDMAGATAILGSASQPLRVGYGHFIANLLEQIKLARTTA---------VAATATQPPPKPADNRATAEKGEGAGKNPPGSSDRLNGDAGVPAAAASVSGGAAAGAMALIGLQRFGGKCVRALA 3076
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BLAST of mRNA_H-paniculata_contig18054.4359.1 vs. uniprot
Match: A0A6H5KDH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDH8_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 1.420e-20
Identity = 70/157 (44.59%), Postives = 84/157 (53.50%), Query Frame = 0 
Query:   78 VRPQLVLLGDLSRAVGHGEAALLCASLLRDEEGAVGILRNASQTLRVGYGQFVSDLQGQLQKAHFKAREHTTGPSCVGSITSTPSPSSFAETKPQQLAGAGEQGMKAR----------TGSGGTPEGLVDEVMGGHVEAVALHGLQQFGGSCVRSLA 224
            VRPQL LLGDLSRAVGH EAAL+ ASLLRD  GA  IL +ASQ LRVGYG F+++L  Q++ A       TT            +P      KP  +  A E+G+ A            G  G P        G    A+AL GLQ+FGG CVR+LA
Sbjct:  810 VRPQLELLGDLSRAVGHVEAALVSASLLRDMAGATAILGSASQPLRVGYGHFIANLLEQVKVAR------TTAXXXXXXXXXXQAP-----PKPADIRAAAERGVGAGQNPPGSSDRLNGDAGVPAAAAPVSGGAAAGAMALVGLQRFGGMCVRALA 955
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18054.4359.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LB77_ECTSI7.550e-2246.36SHR-BD domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5KDH8_9PHAE1.420e-2044.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig18054contigH-paniculata_contig18054:2956..4660 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig18054.4359.1mRNA_H-paniculata_contig18054.4359.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig18054 654..5290 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig18054.4359.1 ID=prot_H-paniculata_contig18054.4359.1|Name=mRNA_H-paniculata_contig18054.4359.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=227bp
MVSSARRSPAEVIAGLVVAIAEMFKMSVEDLSLFASTRPGAAAVVGGSAD
GMPTASEQQQTHVQAAAAAVSHHAASVVRPQLVLLGDLSRAVGHGEAALL
CASLLRDEEGAVGILRNASQTLRVGYGQFVSDLQGQLQKAHFKAREHTTG
PSCVGSITSTPSPSSFAETKPQQLAGAGEQGMKARTGSGGTPEGLVDEVM
GGHVEAVALHGLQQFGGSCVRSLASF*
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