mRNA_H-paniculata_contig10668.432.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-paniculata_contig10668.432.1
Unique Name	mRNA_H-paniculata_contig10668.432.1
Type	mRNA
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)

Homology

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BLAST of mRNA_H-paniculata_contig10668.432.1 vs. uniprot
Match: D7G3C4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3C4_ECTSI)

HSP 1 Score: 395 bits (1015), Expect = 5.370e-121
Identity = 259/450 (57.56%), Postives = 294/450 (65.33%), Query Frame = 1

Query:   79 SKGGFDAAELEAFEQTLRQGGTPEELLARTAKDRGERSLKRKARLMTRTGVTEGEVIRPKRVKRTVTVEVPDNGFGNTVYSD-KQVEIRSRTKLLQFHQDHRPAYWGTWSKTSRQVTGRRPLGKDTSGALNYDYDSEGDWEEEAPGEDLLSDEEGDKEPEDNLDYKVKKYTHXXXXXQRTGNVVVDGWLRQDDEFSDDELDRFDAGSARQRPENPY---------------AAAIGVGAXXXXXXXXXXXXXXXXXGGGDQQAFVAALMFRRGRVSEEEASAHPALRALSAYRAVACGDGXXXXXXXXXXMARFPVPVVEALVEKPRRKDTVEGG----------GKEGSGDSKKDDKAKPRKHKDFPHELMTTLVEKLHGKPDKREDVVNAFVAQHPLCTKKAVTQKVKEISTRERSVHGGFVFVVAATVLEDLKLEKEDVPLKPSPAE 1350
            S+GGF   E+  FE+ L+ GG PEELL +TA++ GERSLKRKA      G  E EV+R K++K TVTV     GFG   YS+ KQVE+R+R KLLQFHQDHRP YWGTWSK+S QVTGRRPLG+DT G LNYDYDSE DWEEEA GEDLLSDEE   EPEDNLDYK +               VVDGWLRQDDEFSD+E+DRFD+G +                          IG GAXXXXXXXXXXXXXXXXX      AFV+A+MFRR  +S+EEA A PALRALS YRAV    G             FPV VVEA+VEK RR DT EGG          GKE         + K RK KD P EL+  LVEKLHGK DKREDVVNAFVA+HP CTKK+V QKVK+++TRERS+HGG VFVV   V+E L +E   V LKPS AE
Sbjct:  734 SEGGFGPEEVVLFEKRLKDGGEPEELLVKTAREMGERSLKRKAIAAALAGDDEVEVVRAKKIKVTVTVAGGRGGFGEPSYSETKQVEVRNRMKLLQFHQDHRPPYWGTWSKSSSQVTGRRPLGRDTKGTLNYDYDSEEDWEEEAQGEDLLSDEE--VEPEDNLDYKARNQA-----------AVVDGWLRQDDEFSDEEIDRFDSGKSNNNXXXXXXXXXXXRKALGFVGEGVTIGAGAXXXXXXXXXXXXXXXXXXX-XXPAFVSAIMFRRRPISDEEARARPALRALSGYRAVTPFSGGNGRRPRSPA---FPVSVVEAMVEKARRSDTGEGGXXXXXXXXXXGKE---------EGKVRKVKDVPDELLPMLVEKLHGKADKREDVVNAFVAEHPQCTKKSVHQKVKDVATRERSLHGGTVFVVNPEVIERLGVETSAVELKPSQAE 1157

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BLAST of mRNA_H-paniculata_contig10668.432.1 vs. uniprot
Match: A0A6H5KVX8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVX8_9PHAE)

HSP 1 Score: 389 bits (1000), Expect = 6.260e-119
Identity = 261/468 (55.77%), Postives = 301/468 (64.32%), Query Frame = 1

Query:   34 GGVEVGA--------GGGRAVVRSKGGFDAAELEAFEQTLRQGGTPEELLARTAKDRGERSLKRKARLMTRTGVTEGEVIRPKRVKRTVTVEVPDNGFGNTVYSD-KQVEIRSRTKLLQFHQDHRPAYWGTWSKTSRQVTGRRPLGKDTSGALNYDYDSEGDWEEEAPGEDLLSDEEGDKEPEDNLDYKVKKYTHXXXXXQRTGNVVVDGWLRQDDEFSDDELDRFDAGSARQRPENPY-----------------AAAIGVGAXXXXXXXXXXXXXXXXXGGGDQQ---AFVAALMFRRGRVSEEEASAHPALRALSAYRAVACGDGXXXXXXXXXXMARFPVPVVEALVEKPRRKDTVEGGGKEGSGDSKKDDKAKPRKHKDFPHELMTTLVEKLHGKPDKREDVVNAFVAQHPLCTKKAVTQKVKEISTRERSVHGGFVFVVAATVLEDLKLEKEDVPLKPSPAE 1350
            GGVEVG         GG   V RS+GGF   E+  FE+ L+ GG PEELL +TA++ GERSLKRKA      G  + EV+R K++K  VTV     GFG   YS+ KQVE+R+R KLLQFHQDHRP YWGTWSK S QVTGRRPLG+DT G LNYDYDSE DWEEEA GEDLLSDEE   EPEDNLDYK +               VVDGWLRQDDEFSD+E+DRFD+G +                            IG GAXXXXXXXXXXXXXXXXX         AFV+A+MFRR  +S+EEAS  PAL+ALS YRAV    G             FPV VVEA+ EK R  DT E G + G+G     ++ K RK KD P EL+  LVEKLHGK DKREDVV+AFVA+HP CTKK+V QKVK+++TRERS+HGG VFVV   V+E L +E   V LKPS AE
Sbjct:  716 GGVEVGXXXXXXXDLGGSVVVRRSEGGFGPEEVALFEKRLKDGGEPEELLVKTAREMGERSLKRKAIAAALAGDDKVEVVRAKKIKVNVTVAGGRGGFGEPSYSETKQVEVRNRMKLLQFHQDHRPPYWGTWSKNSSQVTGRRPLGRDTKGTLNYDYDSEEDWEEEAQGEDLLSDEE--VEPEDNLDYKARDQA-----------AVVDGWLRQDDEFSDEEIDRFDSGKSNXXXXXXXXXXXXXXXXKASGFVGEGVTIGAGAXXXXXXXXXXXXXXXXXXXXXXXXXPAFVSAIMFRRRPISDEEASERPALQALSGYRAVTPFSGGNGRRPRSPA---FPVSVVEAMAEKARGSDTGERG-EAGAGSGVLKEEGKVRKVKDVPDELLPLLVEKLHGKADKREDVVSAFVAEHPQCTKKSVHQKVKDVATRERSLHGGTVFVVNPEVIERLGVETSAVELKPSQAE 1166

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BLAST of mRNA_H-paniculata_contig10668.432.1 vs. uniprot
Match: A0A7S1FKT5_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FKT5_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 1.310e-17
Identity = 60/138 (43.48%), Postives = 80/138 (57.97%), Query Frame = 1

Query:  265 KRTVTVEVPDNGFGNTVYSD-KQVEIRSRTKLLQFHQDHRPAYWGTWSKTSRQVTGRRPLGKDTSGALNYDYDSEGDWEEEAPGEDLLSDEEGDKEPEDNLDYKVKKYTHXXXXXQRTGNVVVDGWLRQDDEFS-DDE 672
            K +V V VP + F    YS+ ++V +  RTK L F +D+RP Y+GTWSK S  V+GRRP GKD  G+L+Y+Y SE +WEEE PGED  +D  GD   +D++D   +                  GWL  DD+F  DDE
Sbjct:  749 KLSVAVAVPSSAFCGPAYSEHREVLLHDRTKYLHFWEDYRPPYYGTWSKRSNAVSGRRPFGKD--GSLDYEYASEEEWEEEGPGEDCQAD--GD---DDSVDEGAE-----------AAGEDFQGWLVDDDDFGLDDE 868

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BLAST of mRNA_H-paniculata_contig10668.432.1 vs. uniprot
Match: A0A835Z793_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z793_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 1.720e-15
Identity = 123/454 (27.09%), Postives = 168/454 (37.00%), Query Frame = 1

Query:  100 AELEAFEQTLRQGGTPEELLARTAKDRGERSLKRKARLMTRTGVTEGEVIRPKRVKRTVTVEVPDNGFGNTVYS--------------DKQVEIRSRTKLLQFHQDHRPAYWGTWSKTSRQVTGRRPLGKDTSGALNYDYDSEGDWEEEAPGED------LLSDEEGDKEPEDNLDYKVKKYTHXXXXXQRTGNVVVDGWLRQDDEFSDDELDRFDAGSARQRPENPY---------AAAIGVGAXXXXXXXXXXXXXXXXXGGGDQQAFVAALMFRRGRVSEEEASA-HPALRALSAYRA--VACGDGXXXXXXXXXX-----------------MARFPVPVVEALVEKPRRKDTVEGGGKEGSGDSKKDDKAKP-----RKHKDFPHELMTTLVEKLHGKPDKREDVVNAFVAQHPLCTKKAVTQKVKEISTRERSVH--GGFVFVVAATV 1293
            A   AFE  LR+G T ++LLA   +DR        AR +T      G    P R  +   +EVP  G                      + V +R R KLLQF  D RP YWGT+SK S  VTGRRPLG+D    L+YDYDSE  W E   G+D             + +P D  DY                    DGW+R DDEFSD EL          R  +P+         ++ I  G                      Q+  + A + R G    + A+   P L +L + R   V C  G                           M   P+PV  AL                                  +  +    EL   LV+ +H + DKR  +V+ F+A HP C+K AV   +   ++++RS    GG V++V+  V
Sbjct:  641 ARQAAFEAQLRRGLTQDQLLA---EDR--------ARNVTGAKRGAGAFHAPPR--KRARIEVPAAGXXXXXXXXXXXXXXXXXXXXXSRVVVLRPRMKLLQFAADVRPPYWGTFSKRSAAVTGRRPLGRDER--LDYDYDSEASWSE---GDDQXXXXXXXXXXXDESDPLDEPDYN-------------------DGWMRYDDEFSDSELRELSDTEKEARFRSPHMYHSLHSTRSSDIACGCAGRVHSASCGLFWRERA----QRPSMRATVSRPGSGKAKVAAPPRPVLVSLVSLRGGVVECAAGKLCGQPGVTASSSAQMAAVLEKYRVIPMMPLPLPVRAALAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKLRRKLSEELTKALVQMIHLRRDKRTALVDEFIAAHPACSKNAVNTAITACASKQRSAAPGGGMVWLVSDAV 1053

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BLAST of mRNA_H-paniculata_contig10668.432.1 vs. uniprot
Match: A0A0L0H9F3_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0H9F3_SPIPD)

HSP 1 Score: 89.7 bits (221), Expect = 2.990e-15
Identity = 42/60 (70.00%), Postives = 47/60 (78.33%), Query Frame = 1

Query:  352 KLLQFHQDHRPAYWGTWSKTSRQVTGRRPLGKDTSGALNYDYDSEGDWEEEAPGEDLLSD 531
            KLLQFH++ RPAYWGTWSK S +VTGRRP  KD    L YDYDSE +WEEE PGE+L SD
Sbjct:  529 KLLQFHENFRPAYWGTWSKKSTRVTGRRPFAKDID-LLEYDYDSEAEWEEEEPGEELRSD 587

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BLAST of mRNA_H-paniculata_contig10668.432.1 vs. uniprot
Match: A0A6J1T8K0_FRAOC (chromatin assembly factor 1 subunit A-B-like isoform X1 n=2 Tax=Frankliniella occidentalis TaxID=133901 RepID=A0A6J1T8K0_FRAOC)

HSP 1 Score: 85.9 bits (211), Expect = 5.170e-14
Identity = 49/93 (52.69%), Postives = 65/93 (69.89%), Query Frame = 1

Query:  301 FGNTVYSDKQVEIRSRTKLLQFHQDHRPAYWGTWSKTSRQVTGRRPLGKDTSGALNYDYDSEGDWEEEAPGEDLL-SDEEGDKEPEDNLDYKV 576
            +G  V + K+VE+  R K LQFH++HRPAY GTW K S  VTGRRP G++    L+Y++DS  +WEEE PGE L  SD+E +KE ED  +Y+V
Sbjct:  657 YGVLVENTKKVEVL-RAKFLQFHENHRPAYRGTWRKRSNFVTGRRPFGQEK--ILDYEFDSADEWEEEEPGESLHGSDDEKEKESED--EYEV 744

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BLAST of mRNA_H-paniculata_contig10668.432.1 vs. uniprot
Match: A0A1Z5JGV0_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JGV0_FISSO)

HSP 1 Score: 85.5 bits (210), Expect = 6.790e-14
Identity = 56/140 (40.00%), Postives = 79/140 (56.43%), Query Frame = 1

Query:  256 KRVKRTVTVEV-PDNGFGNTVYSDKQ-VEIRSRTKLLQFHQDHRPAYWGTWSKTSRQVTGRRPLGKDTSGALNYDYDSEGDWEEEAPGEDLLSDEEGDKEPEDNLDYKVKKYTHXXXXXQRTGNVVVDGWLRQDDEFSDD 669
            +RV  TV V V PD+ F +  Y++++ VE+ ++ K L FH+D RP Y+GTWSK S+ VTGR P  +DT+  L+Y+YDSEG+WEE            GD++    +         XXX  +       DGWL  DDE  +D
Sbjct:  700 RRVTITVDVTVFPDDPFESEPYAERRDVEVLNKYKFLSFHEDIRPPYYGTWSKPSKIVTGRSPFKQDTA-FLDYEYDSEGEWEE------------GDED----IGXXXXXXXXXXXEEKXXXXXXXDGWLADDDEIPED 822

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BLAST of mRNA_H-paniculata_contig10668.432.1 vs. uniprot
Match: V5FUM0_ANOGL (Chromatin assembly factor 1 subunit A (Fragment) n=2 Tax=Anoplophora glabripennis TaxID=217634 RepID=V5FUM0_ANOGL)

HSP 1 Score: 79.0 bits (193), Expect = 1.210e-13
Identity = 55/138 (39.86%), Postives = 70/138 (50.72%), Query Frame = 1

Query:  301 FGNTVYSDKQVEIRSRTKLLQFHQDHRPAYWGTWSKTSRQVTGRRPLGKDTSGALNYDYDSEGDWEEEAPGEDLL-SDEEGDKEPEDNLD-YKVKKYTHXXXXXQRTGNVVVDGWLRQDDEFSDDELDRFDAGSARQR 708
             G T+  DK    + R K L+FH + RPAY+GTW K S  V  R+P G D     NY+ DS+ DWEEE  GE L  S++E DKE ED  D Y+V                V  G L +D E  D+E  R    S +Q+
Sbjct:    3 LGETICEDKSKLRKFRAKFLKFHDNRRPAYFGTWRKKSSHVKPRKPFGTDGE-IFNYEEDSDDDWEEEEQGESLNGSEDEADKENEDEKDDYEVDNEF-----------FVPHGHLSED-EIDDEESARLSPESLKQK 127

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BLAST of mRNA_H-paniculata_contig10668.432.1 vs. uniprot
Match: UPI000614A03E (chromatin assembly factor 1 subunit A-B-like n=1 Tax=Megachile rotundata TaxID=143995 RepID=UPI000614A03E)

HSP 1 Score: 84.3 bits (207), Expect = 1.490e-13
Identity = 56/153 (36.60%), Postives = 77/153 (50.33%), Query Frame = 1

Query:  253 PKRVKRTVTVEVPDNGFGNTVYSDKQVEIRSRTKLLQFHQDHRPAYWGTWSKTSRQVTGRRPLGKDTSGALNYDYDSEGDWEEEAPGEDLL-SDEEGDKEPEDNLDYKVKKYTHXXXXXQRTGNVVVDGWLRQDDEFSDDELDRFDAGSARQR 708
            P   K  + +   +N   + + +   V  + R KLLQF ++ RP YWGTW K S  +  R+P  KDT    NYD DS+ +WEEE PGE L  SDEE D+E  D+ +Y V               +V  G+L  D+E   DE D+ D     Q+
Sbjct:  448 PLEAKDDIVILDDENEGNSNIVNQNIVIEKHRPKLLQFSENQRPPYWGTWRKRSGNIKPRKPFSKDTQW-FNYDVDSDEEWEEEEPGESLHGSDEEKDEENPDDNEYDVDNEF-----------MVPHGYL-SDEEIRADEEDKEDTNPETQK 587

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BLAST of mRNA_H-paniculata_contig10668.432.1 vs. uniprot
Match: A0A507BNY5_9FUNG (Uncharacterized protein n=2 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507BNY5_9FUNG)

HSP 1 Score: 84.3 bits (207), Expect = 1.500e-13
Identity = 50/128 (39.06%), Postives = 68/128 (53.12%), Query Frame = 1

Query:  352 KLLQFHQDHRPAYWGTWSKTSRQVTGRRPLGKDTSGALNYDYDSEGDWEEEAPGEDLLSDEEGDKEPEDNLDYKVKKYTHXXXXXQRTGNVVVDGWLRQDDEFSDDELDRFDAGSARQRPENPYAAAI 735
            KLLQF +D RPAYWGTWSK +  V+GRRP GK  +  L+Y+YDSE +WE +  GE+  SDEE +   +D+L              + +     +GWL  D   SDDE +  D       P+     A+
Sbjct:  507 KLLQFDEDARPAYWGTWSKKTEAVSGRRPFGK--AEMLDYEYDSEAEWEPDEEGEECHSDEEDE---DDSL--------------ESSSQASEEGWLVPDGHLSDDEGENLDRQPPPAEPKKRVIEAL 615

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig10668.432.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig10668.432.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G3C4_ECTSI	5.370e-121	57.56	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KVX8_9PHAE	6.260e-119	55.77	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A7S1FKT5_9STRA	1.310e-17	43.48	Hypothetical protein n=2 Tax=Corethron hystrix Tax...	[more]
A0A835Z793_9STRA	1.720e-15	27.09	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A0L0H9F3_SPIPD	2.990e-15	70.00	Uncharacterized protein n=2 Tax=Spizellomyces TaxI...	[more]
A0A6J1T8K0_FRAOC	5.170e-14	52.69	chromatin assembly factor 1 subunit A-B-like isofo...	[more]
A0A1Z5JGV0_FISSO	6.790e-14	40.00	Uncharacterized protein n=1 Tax=Fistulifera solari...	[more]
V5FUM0_ANOGL	1.210e-13	39.86	Chromatin assembly factor 1 subunit A (Fragment) n...	[more]
UPI000614A03E	1.490e-13	36.60	chromatin assembly factor 1 subunit A-B-like n=1 T...	[more]
A0A507BNY5_9FUNG	1.500e-13	39.06	Uncharacterized protein n=2 Tax=Synchytrium endobi...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig10668	contig	H-paniculata_contig10668:405..6960 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	399.1
Seed ortholog evalue	2.9e-108
Seed eggNOG ortholog	2880.D7G3C4
Preferred name	CHAF1A
KEGG ko	ko:K10750
Hectar predicted targeting category	other localisation
GOs	GO:0000228,GO:0000278,GO:0000724,GO:0000725,GO:0000785,GO:0000790,GO:0003674,GO:0003682,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006302,GO:0006310,GO:0006323,GO:0006325,GO:0006333,GO:0006334,GO:0006335,GO:0006338,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007275,GO:0007346,GO:0007444,GO:0008150,GO:0008152,GO:0008283,GO:0009058,GO:0009059,GO:0009314,GO:0009555,GO:0009628,GO:0009888,GO:0009934,GO:0009987,GO:0010026,GO:0010212,GO:0010332,GO:0010389,GO:0010448,GO:0010449,GO:0010564,GO:0016043,GO:0019904,GO:0022402,GO:0022603,GO:0022607,GO:0022622,GO:0030154,GO:0031497,GO:0031507,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0033186,GO:0033554,GO:0034622,GO:0034641,GO:0034645,GO:0034723,GO:0034728,GO:0035264,GO:0035266,GO:0035295,GO:0040007,GO:0042023,GO:0042393,GO:0042802,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0044770,GO:0044772,GO:0044786,GO:0045787,GO:0046483,GO:0048229,GO:0048364,GO:0048366,GO:0048367,GO:0048507,GO:0048509,GO:0048513,GO:0048518,GO:0048522,GO:0048589,GO:0048731,GO:0048827,GO:0048856,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051082,GO:0051276,GO:0051716,GO:0051726,GO:0060429,GO:0065003,GO:0065004,GO:0065007,GO:0070013,GO:0070087,GO:0070828,GO:0071103,GO:0071704,GO:0071824,GO:0071840,GO:0080186,GO:0090304,GO:0090558,GO:0099402,GO:1901360,GO:1901576,GO:1901987,GO:1901990,GO:1902749,GO:1903047
EggNOG free text desc.	nucleosome assembly
EggNOG OGs	KOG4364@1,KOG4364@2759
COG Functional cat.	S
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko03036
Exons	9
Model size	1389
Cds size	1389
Stop	0
Start	0

Relationships

The following CDS feature(s) are a part of this mRNA:

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig10668.432.1	prot_H-paniculata_contig10668.432.1	Halopteris paniculata Hal_grac_a_UBK monoicous	polypeptide	H-paniculata_contig10668 405..6960 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-paniculata_contig10668:405..6960-
coding sequence from alignment at H-paniculata_contig10668:405..6960-

protein sequence of mRNA_H-paniculata_contig10668.432.1

>prot_H-paniculata_contig10668.432.1 ID=prot_H-paniculata_contig10668.432.1|Name=mRNA_H-paniculata_contig10668.432.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=463bp
GVSGSVGRSWGGGVEVGAGGGRAVVRSKGGFDAAELEAFEQTLRQGGTPE
ELLARTAKDRGERSLKRKARLMTRTGVTEGEVIRPKRVKRTVTVEVPDNG
FGNTVYSDKQVEIRSRTKLLQFHQDHRPAYWGTWSKTSRQVTGRRPLGKD
TSGALNYDYDSEGDWEEEAPGEDLLSDEEGDKEPEDNLDYKVKKYTHTHT
HTQRTGNVVVDGWLRQDDEFSDDELDRFDAGSARQRPENPYAAAIGVGAG
VRIGAGAAAGGAGAKAGGGDQQAFVAALMFRRGRVSEEEASAHPALRALS
AYRAVACGDGEGEDGGGGGGMARFPVPVVEALVEKPRRKDTVEGGGKEGS
GDSKKDDKAKPRKHKDFPHELMTTLVEKLHGKPDKREDVVNAFVAQHPLC
TKKAVTQKVKEISTRERSVHGGFVFVVAATVLEDLKLEKEDVPLKPSPAE
AAAIASAAAAAAA

mRNA from alignment at H-paniculata_contig10668:405..6960-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-paniculata_contig10668.432.1 ID=mRNA_H-paniculata_contig10668.432.1|Name=mRNA_H-paniculata_contig10668.432.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6556bp|location=Sequence derived from alignment at H-paniculata_contig10668:405..6960- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGTGTCAGCGGCAGCGTGGGAAGAAGCTGGGGAGGAGGGGTTGAAGTCGG
GGCGGGGGGCGGCCGGGCGGTTGTCCGTAGTAAGGGGGGTTTCGACGCGG
CCGAGTTGGAGGCGTTTGAGCAAACGCTGAGGCAGGGGGGCACGCCCGAG
GAGCTCTTGGCCAGAACCGCTAAAGGTGAAGAGGAAAACAATGAGATAGA
CACAAGGTGTTTTTTTGGCTTAAGCAGCGACGGGGGGGGGGGGGGGGGAG
GGGGACGCTCTTGTACTCACGTGGATGTGACGGAGACGAGGAAGCAGCCT
AACTCAAATGTATGTTGCATACGAGACTTATGAAGAGAGCTCGAACCAAG
TGCTGATGCTTTTTCACGTATTTCCAACGTGTATCGTGATGTAGTGATTG
ACCTATCCGAAAAATCGACCACACTGACGAGGATGGTGTAAAAGTTATTG
GTCCCACACACGGCAGCGGGATGGAGGAAGGACAGCGTCAAGAAGGAAAC
GGGAACACTACTGAAAGCTCGATTTCCCCCTTGCTCGGTGAACGGAATGC
GATGATGCTCCCGTACTTGTCATTTGTTCTTGTTGGATCCACATGATGGT
CATCTGTCAGCATCCAACATCATAAACATGATAATCATCATGATATTGTC
GCTCTCTTTTTATCTCCTACACACACGCCCTCTGATGATCGATGAATCAA
CGGCATTTGAAATCGACGTTCGTTTCTGTACTCTTTTCGTCGGTCCTCCG
CGAGCGACAGACCGGGGCGAGCGGAGTCTTAAGCGCAAGGCGAGGCTGAT
GACAAGAACAGGGGTAACTGAGGTAAGTCATTATTGCTGTTCTTGATTGT
CATTCCACACTTTGCCCGATCACGCAGACCCGCGGTCCAACCGTAGATGT
CCTGTGTGGCAACACTTATGCATATATAGATCAAAGCACATCGCGCTGAG
AAGGAAAATGAAGAGTGATTACCGCGGGCCTGGGCGATTGGACTATAATG
TATTAGATATACAAACGTTAAGCATGGAGGAAGGAAACGGGGAATGAAGG
GGAGAACCGAAAATATACCAGTCAATCATGAGTAGCAACAGCAAAAGCAG
CACTCATGAAATAGTGTAATCGTGATCAAGTGAAACATAGCGCTTTGAAA
ACTGATATGACTGATGTGTAAGTTGGAAAAAAACAAAACAAAACGGTTAC
ATGATTCATTTGTGTGTATGTTGGCCTGTATGTGTATTTTCACGTCCGAA
TCTTTGCGTCTTCCGTGACGTGTCTTGTTGCGGCACTTGACTCGTCTTGA
TCGTCCAGGGGGAGGTGATACGACCGAAACGAGTGAAGAGGACTGTCACG
GTCGAAGTGCCAGACAACGGATTCGGCAATACTGTCTACAGCGATAAGCA
GGTGATAATGTACCAGACCTCAGTTCGCCCGTCGGACAACAGCAAGCTCA
CCGACCATGTGTCGATGTTACTTCGCAAAACATGTGCGAAGCGTCATCAA
GAAAATGTTTTCAAAGCAGACGAGACAGAGGGTTGGTTGCCCTTTGGGAA
ACGTTGTTCATATCAACTATTGAAAATCTTGTGGCTATATGCCCCCAAAA
GTTTTTGCCATGAAGGAATCATTCAACATAATATTGCACATAACAAAAGA
TATTCAATTATAAGCAAAACACAACAGAACACGTACATATTTCGGTGTTC
TTGAGAACATTGGCGAGGTGTTGATTGATTTACAAGATAGTTTTTGCCAC
TTAACCGAATGTGGTGGTTGAGGTATTCAAGTTCACAAGAGTACGATGAC
AACATCGATATCATGTGTGGACCTCACGCCCTGAGGGGTCGGCCCACAGC
TTGGTGCCCAAACCCTGTTTCGCTCACAAACCGCGCCGTTGGCTTGTGCT
CTACCGACGCTCAGAGGTCGGATTAGCTTAGGGTTGCAGTGGTACTGGTT
AGTTCCGGCGCACAAGAACAAAGCGTGAACCATCTACATGTAAACGGGGG
GGGGGGGACCATGAACCCTGTCAACCATTGCATTAAAAAAGTGGTGAAAC
TGAAAGGCCAGGCCTCACATCTGTCAAAACTGTATATATCTATATATATA
TATATAATGTACATGCAATGATGAACTACGTCATGAAGAAGACATGATGA
AATTTGACAAGAACGTTTACTCAACAACACCCATGTCATAATGATCGCCA
ATTGGTTCCAGGTGGAGATTCGCAGTCGCACCAAGCTTTTGCAATTTCAT
CAGGACCACCGACCCGCGTACTGGGGCACCTGGTCGAAGACGAGCCGACA
GGTCACGGGCAGGCGGCCTCTGGGCAAGGATACCTCCGGCGCGCTCAACT
ACGACTACGACAGCGAGGGTACGAGACGATACGATACGCGTATCATGCTG
CTCTCAAGTTTGTGAAAAAAAAGAAACGATAAATAGTAACCGTCGTTCAG
CTAGCTTACCATCTAAAGACAAGAAACAGACATGCGACCAGTTGATCTTT
TTTGCAAAGAAATTTCCTAGACATTTCCTTTTCACCTGATTTTGTGTCGC
GATCTTTGTCGGTGCGGTCATGTTCTATTTTTTTTAGTATGTTATGTATA
TTGTATTCTCTTTTTTTGTATGAGAGCTGCCGGCGAGCAATGAAGAGCTA
CTTCTCCCATTGGGTAATAACTCAAGAGCAGGAAGATAAATGGATCATAA
AACTCGTAACGTTTCGGTCTTCTTGGTTCAGCTTTGTTATTTTTAGCTTT
CCCCTCACCACAAGAAGCAGCCGGCGAGCGACGTAGATCTTTACCAACCG
GGTCGGAACGGGGTCGGCTTAGGCGTCGTAGCTTACCTTGCACGTAGCTA
CTTGTATTTGTTTCTTTGAAGAGGTTGGGGCAGTGTGTAACGCGAAGCAT
CCCGCGTGTCAATTCGTTTTGTTTGGGGACGTGCGGTCAAGTTTTCGGTT
GGCCTACTGACAGGCGCGCATGGAGTGTGTGTGGGGGAAACGTGCTATTC
ACGTCGATCTGTAAGGCGCTAAGCGTTTATGCACCAAAAGTAACGAAGAA
TGCGGCCGATACCAATGATTGGGATTGGCTTTGCCAAACCAAGCGAACGA
GAGACGGATAGATACCCTTCCTCGCAAGTAGTATTGCATAAAACTGATGA
TAATCTGTCGCTAAACATACGAGAGGTGACCACACATGAATATTGTTAGC
GGGTGCTGTCGTGATCGTTTTCTTTTCCTCTCAGAGTTCCAAATTTGGAA
GGCTTTTTTTTTTTACCCTCCCCGATTGATTCCTGGCCGGCACTTTGTGA
TGGCTATTACAGGCGACTGGGAAGAAGAGGCTCCAGGAGAAGACTTGCTG
TCAGACGAAGAAGGTGATAAGGAGCCCGAGGATAATCTAGACTATAAGGT
AAAAAAATACACACACACACACACACACACACAACGAACTGGCAATGTAG
TAGTAGTACTGATCGCTACTTGTAGGGAATACACGTATCCGTTGGGTAGT
TTTTTTTTCGTAAGGTCGAAGGGTTCATACGAATGAGAGCATAAGTGGGT
GTTGTAGAAAATAATATTTTATTTGCGTGTCTATTTATCAACGCAACCAA
TCAACCCACCATGAAACCACGGCAACGCACTCTTGGCCCCACCCAACTCA
ACTCGACCCTTCCACGAGAATACGTTAAAACGTACGAAAAAATTTCAGTT
GCGCACAATATATGTGACAATACTCTCTTCCAACCTAAACCCAAAAAGAC
ACTGGATCATGACACAAGAGTGTGAAAGATTTGTTCGTGTTAAAAAAAAA
AGAAAAAAGATGTATGAAGGGATGATCTGATGGGTGTGCAAAAATATGAA
CAGGACGGCTGGCTCCGACAAGACGACGAGTTCAGCGACGACGAACTCGA
TCGCTTCGACGCCGGCAGCGCTCGCCAGCGCCCTGAGAACCCTTACGCCG
CGGCCATCGGCGTCGGCGCCGGTGTGCGCATCGGCGCCGGCGCAGCGGCG
GGGGGGGCAGGAGCAAAGGCCGGCGGTGGCGACCAGCAGGCCTTCGTCGC
GGCGCTGATGTTTCGACGGGGGCGGGTGTCGGAGGAAGAGGCGAGCGCGC
ACCCAGCGCTGCGCGCGCTGTCGGCATACCGGGCCGTGGCGTGCGGAGAT
GGAGAGGGAGAGGATGGGGGAGGGGGAGGGGGGATGGCGAGGTTTCCAGT
TCCTGTGGTGGAGGCTTTGGTGGAGAAGCCTAGGTGTGTGTGTGTGTGTT
GTGTCAGTGTTTTTTGGGGTGTTGGAGGTAAAATGTGTGACTGGTCATGT
GTTGTGTATGAGTTTTTTTTTAAGTCGGCAAGGGGATTAGAGAGGTGTAG
TCTGGATGTATTGTGCTGTAATGGCAAGTAACACAAATATTCCTTGATTT
TATTTTATTTTATTTCCGGTCATGTTGTCCGTCTTGATCATGATTTTGTG
CAAAGTACGCTTTTTGTTTTTTATCGCGCCCTTTTAATTTATTCGTTGAA
TTCAATGAATTATTCAGAAGGACCACTTTTCTTTTTTCCTTTTTCGAGTC
TGAAATAGTCGTGTATTGCGTACGGTGTACATCAAAGGCTCTTTTCCATT
TATTTTTTTTCTGTCTTCCAGACGGAAAGATACCGTGGAAGGAGGCGGTA
AGGAGGGGAGCGGGGATAGCAAAAAGGACGACAAGGCTAAGCCCCGGAAG
CACAAGGTAAGACCAAGTTTTTCCTATTTAATTGATATCTGGACGAAAAA
AATAGAACGAGAGGTACAACCGTGGACGGTTTACACCCGTGTGCAAATTT
GTGTCTCCCCTGGACCCAGAGACTACTTATGTGCTTGCAGTAGGGACTCG
CGTTGCGAACCACAGTGCCTGCCGCGCTCGCAGTTGCTCCCTAGAAAACA
CTCGGTAAGCTGTTTCGAGTCTACGGTATTATTAATCGTTTGGGAGCTTT
TGAGCGCGCAATCAGCTTTAGGTAGCGTACTTGCTTTTTTTTGGTTGTTG
AAAAAAGAGACAAAAAAGGCCGTGTTTGCCCATATGCCTGATCTACACTA
AATCTAAAATAGAAATCCTTCCGAACGGCAACTAGCACAAGCTCGTTTTG
CAACCTGAGATGCACTAACGAGCTGTCTCTGAGCTGGTCAAGTATCATGT
CGATTTTTTGGTGGTCGTGCACGATTGGCCCTCAGCAAATATGTTTTTTT
ACTGCGTACCTAGTTGAATTCCCGAAAGGTAAAACAATGAGAATTCAGAT
GATGATTCGGTCATGAGATCCCTATCTAATTAATCCCACTATTTTAGTAA
TGGAGAAAATTCGACTTTGATGTCACGATGGCGAGGATGGAGAGCTGCCG
TTGTTTGAGACAGGGATAGAGTACAGAACAGGTAGGCACTGGGCTCTCTC
TGTCCACAAGGACTGCAGGCAGCGCTCTCAACAACACCCATTGTCAGTTT
GTTTTGTTTTTTCGGAACAGCTGCGCCTGATATTTGATCTTGACCCACCC
ACGCACCTATTCTCCTTCGCCGCCCATGTTTGTCATGGGCCAGTCTTTTT
AGCGGTTTCGCTTTATAGGCTCATTCATTCAGTCGTTCGTTTTTTCCCAT
CTCGTCATCTTTCCTCCCTAAATGTCTGCTTTATTCTGTTTGCATTGCAT
TGCATTGCAGGACTTCCCCCACGAGCTGATGACCACTCTCGTGGAGAAAC
TGCACGGCAAGCCGGACAAGCGCGAAGACGTGGTCAATGCCTTCGTTGCT
CAGCACCCCCTGTGCACCAAGAAGGCGGTGAGTATTATCACTAAAACAAA
TATACGATACGAGGCAATTGCACTGTAGTGGAACGTATATCTCTTGTGGG
TTTCATGTGTCGAAGAGTTCAGAATTTATACGAATTGTAGACTCTTTTTT
TATATGTTTCATTAGAGCCATGGATGGCCCCGCAGGTGTTGTGATACTCT
GGTGCTTTTTTTTCACACCTGTACGAAGGAAGTTTTCACACATATAAAGA
CTTCAGACTGTGTGCATGGATGAGTGTGGCATGTTACAGCCAATCTCTAC
TTCAGCTCGACACCTGTCGGTGGTCGGGATTTTGGTGGTGAGGGTGTAGG
TACCATCGCCTAATAAGTCGTTGTATGCGTGGAACTTTTGTCCTCTGATC
GCGGGTCTGACCGGTGTACACAACCGAAGTTTGAGGCCACTCCATACCCT
CTATCAAAATGGATATAGTGAAGTCATTTAGGGAACGTCGTATAGTTTGA
TTGACTGTGGTAATTGAGTTGACTGGTGAAGACAGGCTTGCGGTCGATTC
CCCCCCCGCCCCCTTCGCCCCCTCAGTACAGTATCTGCCTTTATGATTGA
TAAATCATCCCGTTAACCAAATGAAACAGGTCACACAGAAAGTGAAGGAG
ATATCCACGCGCGAGCGAAGTGTTCACGGTGGCTTTGTCTTCGTCGTGGC
GGCCACAGTTCTGGAGGACCTGAAGCTGGAGAAGGAGGACGTACCGCTCA
AGCCGTCGCCTGCAGAGGCCGCCGCCATCGCTTCGGCAGCGGCAGCGGCA
GCGGCG

Coding sequence (CDS) from alignment at H-paniculata_contig10668:405..6960-

>mRNA_H-paniculata_contig10668.432.1 ID=mRNA_H-paniculata_contig10668.432.1|Name=mRNA_H-paniculata_contig10668.432.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2778bp|location=Sequence derived from alignment at H-paniculata_contig10668:405..6960- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGTGTCAGCGGCAGCGTGGGAAGAAGCTGGGGAGGAGGGGTTGAAGTCGG
GGCGGGGGGCGGCCGGGCGGTTGTCCGTAGTAAGGGGGGTTTCGACGCGG
CCGAGTTGGAGGCGTTTGAGCAAACGCTGAGGCAGGGGGGCACGCCCGAG
GAGCTCTTGGCCAGAACCGCTAAAGGGTGTCAGCGGCAGCGTGGGAAGAA
GCTGGGGAGGAGGGGTTGAAGTCGGGGCGGGGGGCGGCCGGGCGGTTGTC
CGTAGTAAGGGGGGTTTCGACGCGGCCGAGTTGGAGGCGTTTGAGCAAAC
GCTGAGGCAGGGGGGCACGCCCGAGGAGCTCTTGGCCAGAACCGCTAAAG
ACCGGGGCGAGCGGAGTCTTAAGCGCAAGGCGAGGCTGATGACAAGAACA
GGGGTAACTGAGACCGGGGCGAGCGGAGTCTTAAGCGCAAGGCGAGGCTG
ATGACAAGAACAGGGGTAACTGAGGGGGAGGTGATACGACCGAAACGAGT
GAAGAGGACTGTCACGGTCGAAGTGCCAGACAACGGATTCGGCAATACTG
TCTACAGCGATAAGCAGGGGGAGGTGATACGACCGAAACGAGTGAAGAGG
ACTGTCACGGTCGAAGTGCCAGACAACGGATTCGGCAATACTGTCTACAG
CGATAAGCAGGTGGAGATTCGCAGTCGCACCAAGCTTTTGCAATTTCATC
AGGACCACCGACCCGCGTACTGGGGCACCTGGTCGAAGACGAGCCGACAG
GTCACGGGCAGGCGGCCTCTGGGCAAGGATACCTCCGGCGCGCTCAACTA
CGACTACGACAGCGAGGGTGGAGATTCGCAGTCGCACCAAGCTTTTGCAA
TTTCATCAGGACCACCGACCCGCGTACTGGGGCACCTGGTCGAAGACGAG
CCGACAGGTCACGGGCAGGCGGCCTCTGGGCAAGGATACCTCCGGCGCGC
TCAACTACGACTACGACAGCGAGGGCGACTGGGAAGAAGAGGCTCCAGGA
GAAGACTTGCTGTCAGACGAAGAAGGTGATAAGGAGCCCGAGGATAATCT
AGACTATAAGGTAAAAAAATACACACACACACACACACACACACAACGAA
CTGGCAATGTAGTAGTAGCGACTGGGAAGAAGAGGCTCCAGGAGAAGACT
TGCTGTCAGACGAAGAAGGTGATAAGGAGCCCGAGGATAATCTAGACTAT
AAGGTAAAAAAATACACACACACACACACACACACACAACGAACTGGCAA
TGTAGTAGTAGACGGCTGGCTCCGACAAGACGACGAGTTCAGCGACGACG
AACTCGATCGCTTCGACGCCGGCAGCGCTCGCCAGCGCCCTGAGAACCCT
TACGCCGCGGCCATCGGCGTCGGCGCCGGTGTGCGCATCGGCGCCGGCGC
AGCGGCGGGGGGGGCAGGAGCAAAGGCCGGCGGTGGCGACCAGCAGGCCT
TCGTCGCGGCGCTGATGTTTCGACGGGGGCGGGTGTCGGAGGAAGAGGCG
AGCGCGCACCCAGCGCTGCGCGCGCTGTCGGCATACCGGGCCGTGGCGTG
CGGAGATGGAGAGGGAGAGGATGGGGGAGGGGGAGGGGGGATGGCGAGGT
TTCCAGTTCCTGTGGTGGAGGCTTTGGTGGAGAAGCCTAGGACGGCTGGC
TCCGACAAGACGACGAGTTCAGCGACGACGAACTCGATCGCTTCGACGCC
GGCAGCGCTCGCCAGCGCCCTGAGAACCCTTACGCCGCGGCCATCGGCGT
CGGCGCCGGTGTGCGCATCGGCGCCGGCGCAGCGGCGGGGGGGGCAGGAG
CAAAGGCCGGCGGTGGCGACCAGCAGGCCTTCGTCGCGGCGCTGATGTTT
CGACGGGGGCGGGTGTCGGAGGAAGAGGCGAGCGCGCACCCAGCGCTGCG
CGCGCTGTCGGCATACCGGGCCGTGGCGTGCGGAGATGGAGAGGGAGAGG
ATGGGGGAGGGGGAGGGGGGATGGCGAGGTTTCCAGTTCCTGTGGTGGAG
GCTTTGGTGGAGAAGCCTAGACGGAAAGATACCGTGGAAGGAGGCGGTAA
GGAGGGGAGCGGGGATAGCAAAAAGGACGACAAGGCTAAGCCCCGGAAGC
ACAAGACGGAAAGATACCGTGGAAGGAGGCGGTAAGGAGGGGAGCGGGGA
TAGCAAAAAGGACGACAAGGCTAAGCCCCGGAAGCACAAGGACTTCCCCC
ACGAGCTGATGACCACTCTCGTGGAGAAACTGCACGGCAAGCCGGACAAG
CGCGAAGACGTGGTCAATGCCTTCGTTGCTCAGCACCCCCTGTGCACCAA
GAAGGCGGACTTCCCCCACGAGCTGATGACCACTCTCGTGGAGAAACTGC
ACGGCAAGCCGGACAAGCGCGAAGACGTGGTCAATGCCTTCGTTGCTCAG
CACCCCCTGTGCACCAAGAAGGCGGTCACACAGAAAGTGAAGGAGATATC
CACGCGCGAGCGAAGTGTTCACGGTGGCTTTGTCTTCGTCGTGGCGGCCA
CAGTTCTGGAGGACCTGAAGCTGGAGAAGGAGGACGTACCGCTCAAGCCG
TCGCCTGCAGAGGCCGCCGCCATCGCTTCGGCAGCGGCAGCGGCAGCGGC
GGTCACACAGAAAGTGAAGGAGATATCCACGCGCGAGCGAAGTGTTCACG
GTGGCTTTGTCTTCGTCGTGGCGGCCACAGTTCTGGAGGACCTGAAGCTG
GAGAAGGAGGACGTACCGCTCAAGCCGTCGCCTGCAGAGGCCGCCGCCAT
CGCTTCGGCAGCGGCAGCGGCAGCGGCG