mRNA_H-paniculata_contig1794.4313.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1794.4313.1
Unique NamemRNA_H-paniculata_contig1794.4313.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig1794.4313.1 vs. uniprot
Match: D7G4M1_ECTSI (Smc-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4M1_ECTSI)

HSP 1 Score: 76.6 bits (187), Expect = 1.840e-13
Identity = 37/55 (67.27%), Postives = 45/55 (81.82%), Query Frame = 1 
Query:  277 KGKSKCKDHQGPQAGIVKKISVSNFMCHRKLSISLGKHVNFINGSNGSGKSAILA 441
            +GK + +  + P+AG+V K+ VSNFMCHRKLS+ L KHVNFING NGSGKSAILA
Sbjct:   70 RGKKRKRKTEQPEAGVVLKVHVSNFMCHRKLSVPLCKHVNFINGRNGSGKSAILA 124
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BLAST of mRNA_H-paniculata_contig1794.4313.1 vs. uniprot
Match: A0A7S1VYB1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1VYB1_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 9.630e-13
Identity = 32/44 (72.73%), Postives = 40/44 (90.91%), Query Frame = 1 
Query:  310 PQAGIVKKISVSNFMCHRKLSISLGKHVNFINGSNGSGKSAILA 441
            P+AG++KKI V NFMCHRKL++ L ++VNFING+NGSGKSAILA
Sbjct:  100 PEAGVIKKIYVENFMCHRKLTVELCQNVNFINGANGSGKSAILA 143
[Close]
BLAST of mRNA_H-paniculata_contig1794.4313.1 vs. uniprot
Match: A0A6V2GEJ9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2GEJ9_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 9.730e-12
Identity = 32/44 (72.73%), Postives = 40/44 (90.91%), Query Frame = 1 
Query:  310 PQAGIVKKISVSNFMCHRKLSISLGKHVNFINGSNGSGKSAILA 441
            P+AG++KKI V NFMCHRKL++ L ++VNFING+NGSGKSAILA
Sbjct:  100 PEAGVIKKIYVENFMCHRKLTVELCQNVNFINGANGSGKSAILA 143
[Close]
BLAST of mRNA_H-paniculata_contig1794.4313.1 vs. uniprot
Match: A0A7S4RG96_9STRA (Hypothetical protein (Fragment) n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RG96_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 1.330e-11
Identity = 32/44 (72.73%), Postives = 40/44 (90.91%), Query Frame = 1 
Query:  310 PQAGIVKKISVSNFMCHRKLSISLGKHVNFINGSNGSGKSAILA 441
            P+AG++KKI V NFMCHRKL++ L ++VNFING+NGSGKSAILA
Sbjct:  100 PEAGVIKKIYVENFMCHRKLTVELCQNVNFINGANGSGKSAILA 143
[Close]
BLAST of mRNA_H-paniculata_contig1794.4313.1 vs. uniprot
Match: D7G4M2_ECTSI (Smc-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4M2_ECTSI)

HSP 1 Score: 68.9 bits (167), Expect = 8.980e-11
Identity = 33/43 (76.74%), Postives = 38/43 (88.37%), Query Frame = 1 
Query:  313 QAGIVKKISVSNFMCHRKLSISLGKHVNFINGSNGSGKSAILA 441
            +AG+V KI+VSNFMCHRKL++ L K VNFING NGSGKSAILA
Sbjct:  175 EAGVVLKINVSNFMCHRKLTVPLCKQVNFINGRNGSGKSAILA 217
[Close]
BLAST of mRNA_H-paniculata_contig1794.4313.1 vs. uniprot
Match: A0A5J5BB07_9ASTE (AAA_23 domain-containing protein n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J5BB07_9ASTE)

HSP 1 Score: 65.9 bits (159), Expect = 3.120e-10
Identity = 30/44 (68.18%), Postives = 33/44 (75.00%), Query Frame = 1 
Query:  307 GPQAGIVKKISVSNFMCHRKLSISLGKHVNFINGSNGSGKSAIL 438
            GPQAGI+ KI + NFMCH  L I LG  VNF+ G NGSGKSAIL
Sbjct:   16 GPQAGIISKIRLENFMCHSNLQIELGDRVNFVTGQNGSGKSAIL 59
[Close]
BLAST of mRNA_H-paniculata_contig1794.4313.1 vs. uniprot
Match: A0A8J2X4G0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X4G0_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 1.060e-9
Identity = 29/42 (69.05%), Postives = 36/42 (85.71%), Query Frame = 1 
Query:  316 AGIVKKISVSNFMCHRKLSISLGKHVNFINGSNGSGKSAILA 441
            AG++K+I   NFMCH+KL I LG+ +NFING+NGSGKSAILA
Sbjct:  100 AGLIKEIYCENFMCHKKLEIKLGRRINFINGANGSGKSAILA 141
[Close]
BLAST of mRNA_H-paniculata_contig1794.4313.1 vs. uniprot
Match: A0A2R5G690_9STRA (Structural maintenance of chromosomes protein 6 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G690_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 1.440e-9
Identity = 28/43 (65.12%), Postives = 36/43 (83.72%), Query Frame = 1 
Query:  313 QAGIVKKISVSNFMCHRKLSISLGKHVNFINGSNGSGKSAILA 441
            + G VKKI  +NFMCHR+L ++LG+H+NFI G NGSGKSAI+A
Sbjct:   88 ECGKVKKIECTNFMCHRRLEVNLGRHINFITGQNGSGKSAIVA 130
[Close]
BLAST of mRNA_H-paniculata_contig1794.4313.1 vs. uniprot
Match: A0A2C9LXU8_BIOGL (Structural maintenance of chromosomes protein 6 n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9LXU8_BIOGL)

HSP 1 Score: 65.1 bits (157), Expect = 1.940e-9
Identity = 28/43 (65.12%), Postives = 36/43 (83.72%), Query Frame = 1 
Query:  310 PQAGIVKKISVSNFMCHRKLSISLGKHVNFINGSNGSGKSAIL 438
            P AGI+++IS+ NFMCH +L ++LG HVNFI G NGSGKSAI+
Sbjct:   63 PVAGIIRRISIGNFMCHNRLDVNLGTHVNFIVGRNGSGKSAIV 105
[Close]
BLAST of mRNA_H-paniculata_contig1794.4313.1 vs. uniprot
Match: UPI00065C06D6 (structural maintenance of chromosomes protein 6 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI00065C06D6)

HSP 1 Score: 64.7 bits (156), Expect = 2.650e-9
Identity = 27/43 (62.79%), Postives = 36/43 (83.72%), Query Frame = 1 
Query:  310 PQAGIVKKISVSNFMCHRKLSISLGKHVNFINGSNGSGKSAIL 438
            P AG++K++S+SNFMCH +L + LG HVNFI G NGSGKSA++
Sbjct:   68 PVAGVIKRVSMSNFMCHDRLDVVLGSHVNFIVGRNGSGKSAVM 110
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1794.4313.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4M1_ECTSI1.840e-1367.27Smc-like protein n=1 Tax=Ectocarpus siliculosus Ta... [more]
A0A7S1VYB1_9STRA9.630e-1372.73Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A6V2GEJ9_9STRA9.730e-1272.73Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S4RG96_9STRA1.330e-1172.73Hypothetical protein (Fragment) n=3 Tax=Ditylum br... [more]
D7G4M2_ECTSI8.980e-1176.74Smc-like protein n=2 Tax=Ectocarpus TaxID=2879 Rep... [more]
A0A5J5BB07_9ASTE3.120e-1068.18AAA_23 domain-containing protein n=1 Tax=Nyssa sin... [more]
A0A8J2X4G0_9STRA1.060e-969.05Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A2R5G690_9STRA1.440e-965.12Structural maintenance of chromosomes protein 6 n=... [more]
A0A2C9LXU8_BIOGL1.940e-965.12Structural maintenance of chromosomes protein 6 n=... [more]
UPI00065C06D62.650e-962.79structural maintenance of chromosomes protein 6 n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1794contigH-paniculata_contig1794:16488..23204 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score77.0
Seed ortholog evalue8e-12
Seed eggNOG ortholog2880.D7G4M1
Preferred nameSMC6
KEGG koko:K12614,ko:K15014
KEGG TC2.A.57.1
KEGG Pathwayko03018,map03018
KEGG ModuleM00395
Hectar predicted targeting categoryother localisation
GOsGO:0000228,GO:0000722,GO:0000723,GO:0000724,GO:0000725,GO:0000781,GO:0000793,GO:0000794,GO:0000803,GO:0001674,GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003697,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005739,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006312,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007059,GO:0007568,GO:0007569,GO:0008094,GO:0008150,GO:0008152,GO:0009410,GO:0009987,GO:0010033,GO:0010243,GO:0014070,GO:0014074,GO:0016043,GO:0016462,GO:0016604,GO:0016605,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019899,GO:0022402,GO:0030915,GO:0031000,GO:0031625,GO:0031974,GO:0031981,GO:0032200,GO:0032502,GO:0032991,GO:0033554,GO:0033676,GO:0034641,GO:0035061,GO:0035861,GO:0036270,GO:0042221,GO:0042493,GO:0042585,GO:0042592,GO:0042623,GO:0043073,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043279,GO:0044237,GO:0044238,GO:0044260,GO:0044389,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0048518,GO:0048522,GO:0048869,GO:0050000,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051276,GO:0051304,GO:0051640,GO:0051641,GO:0051716,GO:0051983,GO:0051984,GO:0060249,GO:0065007,GO:0065008,GO:0070013,GO:0071139,GO:0071704,GO:0071840,GO:0090304,GO:0090398,GO:0090734,GO:0097159,GO:0097240,GO:0098687,GO:0106068,GO:1901360,GO:1901363,GO:1901698,GO:1902494,GO:1990234,GO:1990683
EggNOG free text desc.double-strand break repair via homologous recombination
EggNOG OGsCOG1196@1,KOG0250@2759
EC3.6.4.13
COG Functional cat.D
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko02000,ko03019,ko03036
Exons4
Model size443
Cds size441
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1794.4313.1prot_H-paniculata_contig1794.4313.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1794 16488..23204 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929400.5919797-CDS-H-paniculata_contig1794:16487..165421622929400.5919797-CDS-H-paniculata_contig1794:16487..16542Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1794 16488..16542 -
1691480844.7518482-CDS-H-paniculata_contig1794:16487..165421691480844.7518482-CDS-H-paniculata_contig1794:16487..16542Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1794 16488..16542 -
1622929400.60328-CDS-H-paniculata_contig1794:18739..188841622929400.60328-CDS-H-paniculata_contig1794:18739..18884Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1794 18740..18884 -
1691480844.7616603-CDS-H-paniculata_contig1794:18739..188841691480844.7616603-CDS-H-paniculata_contig1794:18739..18884Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1794 18740..18884 -
1622929400.615618-CDS-H-paniculata_contig1794:21998..221001622929400.615618-CDS-H-paniculata_contig1794:21998..22100Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1794 21999..22100 -
1691480844.7687423-CDS-H-paniculata_contig1794:21998..221001691480844.7687423-CDS-H-paniculata_contig1794:21998..22100Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1794 21999..22100 -
1622929400.6286845-CDS-H-paniculata_contig1794:23065..232041622929400.6286845-CDS-H-paniculata_contig1794:23065..23204Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1794 23066..23204 -
1691480844.7762394-CDS-H-paniculata_contig1794:23065..232041691480844.7762394-CDS-H-paniculata_contig1794:23065..23204Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1794 23066..23204 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1794.4313.1

>prot_H-paniculata_contig1794.4313.1 ID=prot_H-paniculata_contig1794.4313.1|Name=mRNA_H-paniculata_contig1794.4313.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=147bp
GKGKGKGRADAGTASNEHDDNAMDDDDESFAERVGQMEALARQLVPGDNI
DHDHQDEEQEERPDRFAGGSKENSLAATSNGQTKGHAKREPDKGKSKCKD
HQGPQAGIVKKISVSNFMCHRKLSISLGKHVNFINGSNGSGKSAILA
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mRNA from alignment at H-paniculata_contig1794:16488..23204-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1794.4313.1 ID=mRNA_H-paniculata_contig1794.4313.1|Name=mRNA_H-paniculata_contig1794.4313.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6717bp|location=Sequence derived from alignment at H-paniculata_contig1794:16488..23204- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGAAAGGGGAAGGGAAAGGGGAGAGCAGATGCAGGCACCGCGAGCAACGA
ACACGACGACAACGCTATGGATGATGACGATGAGAGTTTTGCCGAGAGGG
TGGGGCAGATGGAGGCGCTCGCACGACAGCTGGTACCAGGTTTGTACGGG
TGGTGTGTCTTCTCTTTTTCTTGTTGAATTGAATTGTGATTATTTTTGGG
TCGGATTGAGTTACATGATATGCTGTGTATGTATGTATGTATGTATGTAT
GTATGTATGTATGTATGTATTAAATTTAACGTTTCAAAGTGTGGAGGGCA
CCCCAAGTGAATATAAAGGAATGGGAGAAGGTGTTTTTTTTCGGCAACGG
AGACGTACGGAGATTTTTTTTTTTCACACAAATCTCCTTTATATTTACAC
TTTTTTCAAGCTAAATTTTTCCAAACGGTGCGGTGCTATTGAATAGTGAT
ACCAAGAGTTGGTTGATTGGAAATGGAGTATTAATCTCACGCACCGTGAT
GGGCGGCAAACTGCCCGCAGCCCCTCTCCCCCCCCCCCTCCCCCGAAGGG
ATTTTTCACACAATTGTGCTGTATTCTTTTCCTAGATTTTGTTCCCATTT
GAAGTTTAATCAGGAACGCGGTTTTCAACGTCCGCGGTCCATAGATCCGG
TCAATCGGCAGATATCCGTAAGATCAAGATCGATATCTCGAACAGCACAT
GTTGTTGTCATTAATGTCGTGTAGGAGCTTCTTTTTTTTGAGATGAGCAC
ATTCGAGAAATGTTCGCAAACCCAGTGGTATGTTTTTTGTCGGTATTCAC
GTGTTTTGTAAAATCAGGAGAGGTTCTAAATCACGAACCATGTCCTGCCA
CACACAAACACACACACATATATATATATATATTATCTCATACCACTAGT
GAGGTCCCCGTATCCACTTTTGTCAACAGTCATCACCCGTATAACCCACG
CACAACATGAACAGAAAAATCGGTGTTAGGTACAAAGTTGAAAAACGCTT
GAATAACGATTATTCACCTCTTATCATTATCACCCTCACTGTAGTGAATT
CTGCTTATTTTTATGAAATACAACGTGAATTTCGACTGTTTCTCTGTGCA
TCAGGGGACAATATCGACCACGATCATCAAGACGAGGAGCAGGAGGAGAG
ACCGGACCGCTTCGCGGGGGGGAGCAAGGAAAACAGTCTTGCTGCTACGT
CAAATGGTGAGCAGTACTCAGTACCCGGGCAACGTATCACGATACACACC
CGTTTCATCCCTTTGTATCCTGTTTTCTGAAACGGATTCTGTCGTTTGTA
ACAGGATCCCGTCCTGTCCAATGCAGGCCCATAATTTTCATCACGCGATA
ATCCCGTGAGGTCCTGTCACATCTTGTACCGTTCCATGCCGTGGTCCTTC
GTGCCGCTCTCCTGAATGTACCTTTCCAATGCCTTCGCGGTTCCTTCGAC
GCTGTCTGCCGCACAGCGCTCCTTGTTCATCTTTAGGATGGAACGCACGT
CCCGCCCCAGGCTTGTGGTGCTTCTTCCCCTCGGCCCGCTCAGTACCCCC
CGCTTCTGGCACTTTTTTCAGGAACTGTTTTTTTCGTAGATCTCGTGTGC
GTTAGACTATCAAATCCAGGAGACGAGCAACCTGCCTGGTGTCTCCTTCT
CCCTTATCCCGATGAGCAGCCGCAGCATACTCATCGTGAGTACGCAGGAA
TGCTCTTGCAGTGCTCCGGTTCACGGTGCCCTGAAACCACGGAGCACGAA
TGACATCACTGGCTACCAAGAAAACATCCGGTACTCTATGGCTGTCATGT
TTCATCTATCTTTCTTGAAGTCACACTTGTTTCCGATCTGGCTGTTTTCT
CCACATTAGCCGCCGTGTTTTCTGCTTGCAGAAGCCCACTGTTAACACAA
CCCCTCTTCGCGCCGCAGTGCGCAGAATTTTCAGCAGCCCCTTAGTGGGT
ACTATGCGCCGCAGTGCGCAGGTTGGTCAAGCTCCTCAATGAGCTCTAGC
AGATCCATGGCCCCGCAGTGGGTTCTTCGCGCCGCAGTGCGTGGTTAGGG
CAAGCCCCTCGGTGGACATGGTAACTGTAGCTGCAGGGCAGACTCAATCT
CTGTACGGTAAACAAGTAGTTATTGCAGTGTCTTACAGTTGTTTTGCTTA
TATTGATAGAAAGGTATCGATATATATATATTCATATGTTGAAATCAGTA
TATATATTATCTAGGGTATAAAAAGCCCCCCGTGCCGTCTATTTGACGAG
GGCTAACTCTATTGTTGGCGATGTTTTGCCCCTGTCCAACCAATCATGAG
CGTCAACAAGAACCAATCTGTGACAGTGTGATTTGAAGGCCAATAGGATT
GTGCGGACAGAGTATATTGAAGGCCAATACGAACGTGTGGACGAAATGTA
TTGAGTATATTGACCCCAGCAGTATTGATAATATCAATGCATGAGCGCTC
CGAGAAGAGCATTTTGCATATTGACGGGAAAATACTTCTACATGTCCAAT
CGTCCACCCTGCCCAAGGCAACCTCCTTCTTTGTAGTGTGTATTTTTTGT
TATCTTCAATCCTCATGTGTATACTGACTGTGTACTGTGACTGTATTGTG
AATACGCCGTGTTATTGTGCCATATATTGTGGACATGACTATATATTAAT
CGGCAATACCATGTGCTCTCTACAATAGTATGTATTATCCAAACAATGGG
ACTATCCAGTCGTGTTGGAATGTATGTTGTCCGAACGATATGACCGCCCG
AATGTGTCGGAATATATATATATATATATATATATATGTGAAGAGCACGT
TCCTGACGTTCCTGGGGTTCCTGGGGTTCACGAACCCCGACCCCCTACAC
AACGACCAATGGCATTTTTGTCCCTTTCTCGGAACAGCTTTCTAGCTGTG
TCCGACCCTCGATGGTCACTCCATCTCCGAGAGAACAAAACCCAAGTGCT
TGCTCCGCACTACATCTCAAGACCTAGAACCGACCCGCATAGAGCAGGCG
GTGTCCCCTCGAGAGCTAGTCTCTCCCGGGAGCATCGTTTTCTCATATAT
ATATTTATATATATTTATATTGACCTAACAATACGACCGTCCGACAGAAT
ATGGGACTCAAATTGTGACCCACTAATTTCAATATAAAAATGAATAACGC
TACTGCTCGCCATTCTCGCCAAAATCGATTTTTTTTATCATCGGGCCCGT
ACTGTATATATGTATATATATATATATATATATATATATGAACTGTTGAA
TATGTCTCAATACATATTGGTGAAGCATTGTCCTCCCTCGCGGTCGAGAT
AATATTGTGTGCGTTCAACGTATCACGTACTATCGATGCAAACCTATCGA
TATCTATATTGAAAACATATTGCTCTGTCTAAGGTGTGCGAAGTTCATTA
GTTGAGGTTGCCAATGGATGTCTTGAACATATTTTCCAATCCAAAACAGC
TGAACTATTTTCTGGAAAGGGCTTTTTGTTTTTTGAAAATTGAAGATTTG
GGAGAAACAGTAACGTGGGCTCAAATTACAATCTCTTCTGGGGAGCTTGA
GATTCATCGAAAAACAAGCATGCCACCCGAAAGCCCACTAGTTCGGCTTG
CATTTTTTTCGTTTGTTCATGTAAAAGTTTGTAATATGTGTTTATTGAGA
ATTCAGGGCGAATTTGTCGCTTTTGTGGAAATAGTTCATGTTGGAAAGAA
AAGCACGATGAGAAGACAGTTTGTTCATTGGCCTTTTAAACGTTTTCCTT
GTATTGTGATAAATCTCTTGTGTGCAGGAGAGATGAATATTCAATCAGAT
TTTGGTCTTTTCCCCCACCGTCATTTCCAATAAAATTTATAGGTATTCGG
AGGACAGGGTTTCAAGCCTTTCAAGTTACCAAGAATATGTTGAATATATG
TGTTTGATCTTCATTAAAAAAGAAGAAAAAAGACAGTTACAAACCTCGTA
ACCACACAGAGTTAGGGGGCGCGGAGTAGATTAATTTAATGTTTGGTGGG
TGGGTATATACAGTGTTTTGCATATGGTTGTAAAGTATTACTAAGGCTGC
AGGGCTTGTTTGTCTGACGTTTGGTTATTTGGTCATTTTCCGCTTACGTT
GTACTGAAAAAACGGTTTGTTCGATCGTACTTGCCTGTTCGAACAGCAGT
TCGCGTGGTTATTTTCCACCTGTTTCACTCTGTTCTGCAAAGCTGTTCGT
TTGGTCATTGTCCATGCACTTTTCACTCTGCTCAAAAACAGTTCGCTTGG
TCAATTTTCTCTCAAGTGATGCTTCAGAATGTTACGGTTGGTCATTTTCC
GCTTTGTTGTGTTGGTGCAGGTCAGACCAAAGGCCATGCCAAAAGGGAAC
CAGACAAGGGGAAGAGCAAGTGCAAGGACCACCAGGGGCCGCAGGCGGGG
ATTGTAAAAAAAATAAGTGTATCGAACTTCATGTGTCACCGCAAGCTCTC
CATCTCTCTGGGAAAGTGAGTAGTAGGTGTTGTAATCTGTATATCGTTCA
AGGAACACAGAGACATTAGCAATTTTTGGATTATGTATTTCTGGTCAAGA
TAGAAAAAAAAAGTAGAAAAGGTGTGTGTATGTGTGTGTGTGTGTGTGTG
AGAGAGAGAGAGAGAGAGAGAGACATTCCCAGCGGTAACTTCCTTGCAGA
TGGAGAACTGACTGACTGACTAAACTTGTACGCCGAATTCCCTCCTTTTT
TTTTTTTTGTCTTATTCTGTTTTGTTTTGTTTTTTTCTTATTCTATTTTT
TTTTATTTTGTCTTAGTCCGTTTTTTTTTTTTAATGAGCCAGCTTCAAAA
ACAGGGAATTGTAGTTCACCTTGAGGAGATAAATATATCGACGCATATTG
CTTATCGTCTTGCCTACTTTTGCCCATCTATGGAGGGGAAAAAAAGGTGA
AAAAGTGGCGAAATGTACTTGGGAACTAACTGACTGCAACAAATGAAGGA
ACAAGATGTCCTCTACACGTACATACGATTAACCAATTTCCCACTACAGT
AACTCCAATCCTTTTGGTCTGAAACTCAGCAAGATATCGGACGCCGAAGC
TCACTAACGGAGCAAAAATATGGCAGCAAAAAATGCCACGATAAGACGTG
GGTTATGTACCCTAACTTCGAGCACTACGTAACATGCAGTACTCATTTGT
TGCCTTTTTTCTCTTTTCACCCAATATACTGTCATACTCCACTCCCTTTG
TGAATTGAGGACGAAATTGGCCTTCCAGATGTCAGATGTGCAGAGGGAAT
TTAGACTATATGGTCGTGTATATACGGTTTCATATTGGGCGATTAGTCGT
AGGCTCGGGAGACAACGGGGACAATCGTTCGGGCGGCGGGGAATCGGATG
GCAAGCGAGTTCGCAGCTCGTAAATGGATTCTGACGATTTCCTGGTGTGC
ACCTCTCCTCGTTATCTAGTCATGGATTCATGTGATGCGTTTAGCCTGGG
TTGCGGGTGTGTTTTTCAATAGTCATCGGTTGCTAACGACTTGCTGTTGG
TTTTACGGATGTCTGCCTCATGAAATGGCGAAACGGGGGAAGGTTGACGG
GGGGGGGGTGGGGAGCTTATTGTTGGAAGTTTGGTGGCAACTGATTGGCT
CAGTCGGCCACCGCTGTAGTCTAGTCGGTTTCACTTTGGAAATATCGACT
AAAGTCAACCACATGCCAGATTTATTTGATATATATTTTTTTATTAAGAA
CAGCATATTGGTGAACTAGGGACCCAACTTTGAGATGGGGATGATGGGTT
ATATTGGAAATAGGCTGTTTCCTGAAGATCCGAAATCGATCTTAATCGGA
TCTTCAGGAAACAGCCTATTTCCAATATAACCCAGGGTCCCCATCTCAAA
GTTGGGTCCAGTTCACCAATATGCTGTTTAAGGGTCTTTTCACGTGGCCA
ACAGTTTTTTCCCCACATTGCCGTCCACGAACCGGTTCATGAACAAGGGC
GTGTTAAAAAAAAAAAATGTTTGTCATCTATTTTTTTTTACTATTTTGTT
TTATTTTTTGGCGTTTTTTGTTGCTGCTCGTGACTCCACAAAGTGGTGGC
ATTAGAAATATCTCGTCGAGATCTGTGGATGGATCTGCGCTTTTGGCAGT
GATGAAAAAGGTATATCATTGTCTCCCCTCCTCAAAAAAAAAGCTTTTGA
AAAAAACGAGCGTATTTTTTTTTAAAGCCAAAGGATTCTAGTGTTTTACA
TGACCAATCGCGAACCGAGAAAATTCTTTCCATGACCGGAAAAATTACAA
ATGTCGCACACGACCGATCGCGGAGGAGGTCAATTGTCTTGCGATTAATC
GCGAACCGGTCCGTAGAGGTTATACATTTCACACCGACAACAACCGATAA
CCGGTTCGCGGACTTTGTGATGTGAAAAAGACACGTAATAAACAACGCTA
GGCATGCGAAAAAAAATGTTGTACAAAATCGGGCGTGTTTTAAGTTTTTA
CATCACGGGACCGGACCGGACCGGACCGGACCGCAGAATTATTATATGAC
CAACCGCGAACCGGCTCATAAAATAGTCAATCATGTGAGAAATGTTACAT
GTAGATATGTAATGTGGATTCACCACATAAAAAAAGACGTATGTGTAGAT
GTGTACTGTCGGCTCATGCTCATCATATAATTATTTTTACATTTTTATGC
GTCTTTTTACAGACACGTGAACTTCATCAACGGGAGCAACGGGTCAGGGA
AGTCAGCCATCTTGGCT
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Coding sequence (CDS) from alignment at H-paniculata_contig1794:16488..23204-

>mRNA_H-paniculata_contig1794.4313.1 ID=mRNA_H-paniculata_contig1794.4313.1|Name=mRNA_H-paniculata_contig1794.4313.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=882bp|location=Sequence derived from alignment at H-paniculata_contig1794:16488..23204- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGAAAGGGGAAGGGAAAGGGGAGAGCAGATGCAGGCACCGCGAGCAACGA
ACACGACGACAACGCTATGGATGATGACGATGAGAGTTTTGCCGAGAGGG
TGGGGCAGATGGAGGCGCTCGCACGACAGCTGGTACCAGGGAAAGGGGAA
GGGAAAGGGGAGAGCAGATGCAGGCACCGCGAGCAACGAACACGACGACA
ACGCTATGGATGATGACGATGAGAGTTTTGCCGAGAGGGTGGGGCAGATG
GAGGCGCTCGCACGACAGCTGGTACCAGGGGACAATATCGACCACGATCA
TCAAGACGAGGAGCAGGAGGAGAGACCGGACCGCTTCGCGGGGGGGAGCA
AGGAAAACAGTCTTGCTGCTACGTCAAATGGGGACAATATCGACCACGAT
CATCAAGACGAGGAGCAGGAGGAGAGACCGGACCGCTTCGCGGGGGGGAG
CAAGGAAAACAGTCTTGCTGCTACGTCAAATGGTCAGACCAAAGGCCATG
CCAAAAGGGAACCAGACAAGGGGAAGAGCAAGTGCAAGGACCACCAGGGG
CCGCAGGCGGGGATTGTAAAAAAAATAAGTGTATCGAACTTCATGTGTCA
CCGCAAGCTCTCCATCTCTCTGGGAAAGTCAGACCAAAGGCCATGCCAAA
AGGGAACCAGACAAGGGGAAGAGCAAGTGCAAGGACCACCAGGGGCCGCA
GGCGGGGATTGTAAAAAAAATAAGTGTATCGAACTTCATGTGTCACCGCA
AGCTCTCCATCTCTCTGGGAAAACACGTGAACTTCATCAACGGGAGCAAC
GGGTCAGGGAAGTCAGCCATCTTGGCTACACGTGAACTTCATCAACGGGA
GCAACGGGTCAGGGAAGTCAGCCATCTTGGCT
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