prot_H-paniculata_contig17882.4287.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17882.4287.1
Unique Nameprot_H-paniculata_contig17882.4287.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length118
Homology
BLAST of mRNA_H-paniculata_contig17882.4287.1 vs. uniprot
Match: D7FWF2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWF2_ECTSI)

HSP 1 Score: 108 bits (270), Expect = 9.110e-27
Identity = 58/130 (44.62%), Postives = 79/130 (60.77%), Query Frame = 0
Query:    4 LCRIVFCIVGKQQPEEAYQRALELELRCCDVRVEKEVAQPVMYRRVEISSRRIDL---------------PVTSLTKGINCKSKTSTNCVRHLQYNMDVLSMEYGFLINFPHKAGFPSPPSGAAFVQQPL 118
            +CR VF  +G+QQ E AYQ AL++EL    V V++EV   + YR ++ISSRR+DL                V++LTKG      T+ N V  LQY +DV  + +GFL+NFPH AGFP PP+G  F Q+P+
Sbjct:  112 MCRTVFAALGRQQTESAYQMALKIELEDRGVAVQQEVKISITYRDIDISSRRVDLLLTLRDGSTAIVEMKAVSTLTKG------TNLNAVHQLQYYLDVFDINHGFLLNFPHDAGFPPPPNGGIFRQEPI 235          
BLAST of mRNA_H-paniculata_contig17882.4287.1 vs. uniprot
Match: H3H031_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H031_PHYRM)

HSP 1 Score: 68.6 bits (166), Expect = 1.820e-11
Identity = 44/121 (36.36%), Postives = 64/121 (52.89%), Query Frame = 0
Query:    4 LCRIVFCIVGKQQPEEAYQRALELELRCCDVRVEKEVAQPVMYRRVEISSRRIDL------PVTSLTKGINCKSKTSTNCVRHLQYNMDVLSMEYGFLINFPHKAGFPSPPSGAAFVQQPL 118
            +C  V+ ++G    E  YQRAL LELR   V V  EV  P+ Y+  +I++RR+DL      PV    K +    K     ++ L++ M    +  G+LINFPH AGFP+  S   + +Q L
Sbjct:   88 ICNEVYRVLGAYNLEATYQRALALELRDRGVTVSSEVEIPIFYKGQKIATRRVDLYLKLDKPVILELKAVATGLKPEH--MKQLKFYMTQFKVREGYLINFPHIAGFPNE-SSVQYTEQVL 205          
BLAST of mRNA_H-paniculata_contig17882.4287.1 vs. uniprot
Match: A0A1M6NQT0_9BACT (GxxExxY protein n=1 Tax=Tangfeifania diversioriginum TaxID=1168035 RepID=A0A1M6NQT0_9BACT)

HSP 1 Score: 50.4 bits (119), Expect = 1.980e-5
Identity = 35/105 (33.33%), Postives = 55/105 (52.38%), Query Frame = 0
Query:    2 QILCRIVFCIV------GKQQPEEAYQRALELELRCCDVRVEKEVAQPVMYRRVEISSRRIDLPVT-SLTKGINCKSKTS-TNCVRHLQYNMDVLSMEYGFLINF 98
            +I  +I+ C +      G    E  YQRALE+E     +  ++E   P+MYR V+I +RR+D  V  +++  I   S    TN  + L Y ++  ++E G LINF
Sbjct:   10 EITSKIIGCAMTVHNTLGSGFQEVIYQRALEIEFSFAGLYFKREFEMPIMYRDVQIGTRRVDFLVEDNISVEIKAISHLDDTNLAQGLNY-LEAYNLEVGLLINF 113          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17882.4287.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FWF2_ECTSI9.110e-2744.62Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
H3H031_PHYRM1.820e-1136.36Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A1M6NQT0_9BACT1.980e-533.33GxxExxY protein n=1 Tax=Tangfeifania diversiorigin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026350GxxExxY proteinTIGRFAMTIGR04256TIGR04256coord: 17..100
e-value: 2.1E-9
score: 35.8
IPR026350GxxExxY proteinPFAMPF13366PDDEXK_3coord: 7..101
e-value: 2.3E-12
score: 47.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17882contigH-paniculata_contig17882:4645..5043 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17882.4287.1mRNA_H-paniculata_contig17882.4287.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17882 4645..5043 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17882.4287.1 ID=prot_H-paniculata_contig17882.4287.1|Name=mRNA_H-paniculata_contig17882.4287.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=118bp
MQILCRIVFCIVGKQQPEEAYQRALELELRCCDVRVEKEVAQPVMYRRVE
ISSRRIDLPVTSLTKGINCKSKTSTNCVRHLQYNMDVLSMEYGFLINFPH
KAGFPSPPSGAAFVQQPL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026350GxxExxY