prot_H-paniculata_contig1780.4257.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1780.4257.1
Unique Nameprot_H-paniculata_contig1780.4257.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length285
Homology
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BLAST of mRNA_H-paniculata_contig1780.4257.1 vs. uniprot
Match: D7G1S9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1S9_ECTSI)

HSP 1 Score: 164 bits (416), Expect = 6.480e-43
Identity = 98/191 (51.31%), Postives = 125/191 (65.45%), Query Frame = 0 
Query:   98 PGGLGVVLDELSGWDHD--------ELVSAMGQGVGIPLRLS--WAEALVERFEA---KGMAIEAVKD-GLRGSGSARGKLDVIAFVEFLRLKTFSISVMTPFGLVELSVQDPLLPLGGLREMLVKKMFWRQHNCNVRRSEFQVRRSDRNNFSISRHYGSLPLDTESPEQRRKLVADVLRPGELLFVTDRL 274
            P G G V+  LS  D +        E VSA  +  G+ +++   W + L  +F A   +G A   V+  G  G G+    LD+ A  +FLR K FS+SVMTPFGLVELS++D  L LG LRE+++ KMFWRQHNC       QVRRSDR+NF++SR+YG+LPLDTES  QRR+LV DVLRPGELLFVTDR+
Sbjct:  193 PRGGGFVVRALSSVDGNGSGTLSPAEFVSAASKVAGLDMQIEQEWGDVLATKFAATTHRGEAGGGVRWLGGSGEGTDTHALDIAALDDFLRPKHFSLSVMTPFGLVELSLEDQFLTLGDLREVIINKMFWRQHNC-------QVRRSDRDNFTLSRYYGTLPLDTESAGQRRRLVLDVLRPGELLFVTDRV 376
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1780.4257.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G1S9_ECTSI6.480e-4351.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1780contigH-paniculata_contig1780:2564..5195 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1780.4257.1mRNA_H-paniculata_contig1780.4257.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1780 2562..5195 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1780.4257.1 ID=prot_H-paniculata_contig1780.4257.1|Name=mRNA_H-paniculata_contig1780.4257.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=285bp
GRVRRTSAQFSSTLQPQETKTQYVTGGRMIPASTRLFWSSRDRPAGRTIK
DGPTPRRNTSRGESATARLIGNTNSARSSSAGTAYSSTSTKASRAGLPGG
LGVVLDELSGWDHDELVSAMGQGVGIPLRLSWAEALVERFEAKGMAIEAV
KDGLRGSGSARGKLDVIAFVEFLRLKTFSISVMTPFGLVELSVQDPLLPL
GGLREMLVKKMFWRQHNCNVRRSEFQVRRSDRNNFSISRHYGSLPLDTES
PEQRRKLVADVLRPGELLFVTDRLPPRKRGDPRVI
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