mRNA_H-paniculata_contig10649.424.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig10649.424.1 vs. uniprot
Match: D8LR81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR81_ECTSI) HSP 1 Score: 352 bits (904), Expect = 1.370e-117 Identity = 178/283 (62.90%), Postives = 211/283 (74.56%), Query Frame = 1 Query: 10 SYTLHETIASWPDVPNSSYWVLLSFPFLTLVACVIWLRVLWPCP--DASPKRFEPVSMKIADK------TEATSLSSGTSNGAYSSIEAGIANST--------TATVSDSSSGSSGSGR-VLEAGEVAGDYSRDWKGTFDMTLLVTQIVWLGVNIFLTHKLKPELFANTEFWMLQIPKLGCMIAVSILAGLLCRHFCPADENGYIMTSKNSWFKVNYTRKVQHFAAYLVPLLFTPSVNCDCKGTLELSWGVWATMIGFLVMIKPVRETIPLFMLQFNGLDRPE 807 S L +T WP+VP+ +YW L+S PFLTLVAC +WLRV+WPCP D + K F P ++ + D TE ++L SNG Y S+E G NS + S +S+GS+G+ + V+EAGEVAGDYS DWKGTFDMTL+ + WL VNI LT ++P LF N EFW+LQ+PKL CMIAVSILAG LCR+FCPAD+ GYIMTSKNSWFKVNYTRKVQHFAAYLVPLLF PS +C C GTLELSWGVW T+IGFLVMIKP+RE +PLFMLQFNGLDRPE Sbjct: 5 SEILEQTTHEWPNVPDETYWALVSLPFLTLVACCVWLRVVWPCPTRDNNLKDFTPATL-LGDAGGGGSVTERSALQDA-SNGGYYSVENGRGNSPGNGAGKGLPSGNSYTSTGSTGTNKSVIEAGEVAGDYSLDWKGTFDMTLVQVTVAWLAVNIGLTLWIQPTLFQNAEFWVLQVPKLACMIAVSILAGSLCRYFCPADDTGYIMTSKNSWFKVNYTRKVQHFAAYLVPLLFRPSPDCHCTGTLELSWGVWVTLIGFLVMIKPIREAVPLFMLQFNGLDRPE 285
BLAST of mRNA_H-paniculata_contig10649.424.1 vs. uniprot
Match: A0A6H5J7Y0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7Y0_9PHAE) HSP 1 Score: 221 bits (564), Expect = 4.210e-67 Identity = 109/191 (57.07%), Postives = 122/191 (63.87%), Query Frame = 1 Query: 379 MTLLVTQIVWLGVNIFLTHKLKPELFANTEFWMLQIPKLGCMIAVSILAGLLCRHFCPADENGYIMTSKNSWFKVN------------------------------------------------YTRKVQHFAAYLVPLLFTPSVNCDCKGTLELSWGVWATMIGFLVMIKPVRETIPLFMLQFNGLDRPE 807 MTL++ + WL VNI LT + P LF N +FW+LQ+PKL CMI VS+LAG LCR+FCPAD+ GYIMTSKNSWFKVN YTRKVQHFAAYLVPLLF PS +C C GTLELSWGVW T+IGFLVMIKP+RE IPLFMLQFNGLDRPE Sbjct: 1 MTLVLVTVAWLAVNIGLTLWIHPTLFQNAQFWVLQVPKLACMIVVSVLAGSLCRYFCPADDTGYIMTSKNSWFKVNGQTTAILRLFPYFVPVLDAPPSLVVLHFSLFSRLVIYFFLYFCWFQVNYTRKVQHFAAYLVPLLFRPSPDCYCTGTLELSWGVWVTLIGFLVMIKPIREAIPLFMLQFNGLDRPE 191
BLAST of mRNA_H-paniculata_contig10649.424.1 vs. uniprot
Match: A0A485K4N3_9STRA (Aste57867_62 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K4N3_9STRA) HSP 1 Score: 212 bits (540), Expect = 3.180e-63 Identity = 109/247 (44.13%), Postives = 144/247 (58.30%), Query Frame = 1 Query: 73 LLSFPFLTLVACVIWLRVLWPCPD--ASPKRFEPVSMKIADKTEATSLSSGTSNGAYSSIEAGIANSTTATVSDSSSGSSGSGRVLEAGEVAGDYSRDWKGTFDMTLLVTQIVWLGVNIFLTHKLKPELFANTEFWMLQIPKLGCMIAVSILAGLLCRHFCPADENGYIMTSKNSWFKVNYTRKVQHFAAYLVPLLFTPSVNCDCKGTLELSWGVWATMIGFLVMIKPVRETIPLFMLQFNGLDRPE 807 ++ P +TL+ + LR +WP P A PK P DK + ++ ++ SS + E GEVAGDY W TFDM L+ + +LGV + LT+ P+ F++ FW++Q+PKLGCM+ VS+L GL+CR FC DE GYI+T+KNS FKVNYTRK+QHFAAY+VPL+ V D G L L WG W TM+GF ++IKP+RE FMLQFN LDRPE Sbjct: 36 IILLPIVTLLLIYVLLRCVWPIPQSQALPKFAGPKYGATDDKDKLNTIKK----------------------TEKSS-------LCEEGEVAGDYEESWTSTFDMVFLIFMLAYLGVMLVLTYFYSPQYFSDINFWLMQLPKLGCMMLVSLLGGLVCRCFCNVDEKGYIITNKNSAFKVNYTRKLQHFAAYMVPLV----VKSDYHGPLALGWGDWFTMLGFFILIKPLRENFSFFMLQFNSLDRPE 249
BLAST of mRNA_H-paniculata_contig10649.424.1 vs. uniprot
Match: A0A6A4XMZ5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4XMZ5_9STRA) HSP 1 Score: 208 bits (529), Expect = 7.610e-62 Identity = 110/262 (41.98%), Postives = 146/262 (55.73%), Query Frame = 1 Query: 25 ETIASWPD-VPNSSYWVLLSFPFLTLVACVIWLRVLWPCPDASPKRFEPVSMKIADKTEATSLSSGTSNGAYSSIEAGIANSTTATVSDSSSGSSGSGRVLEAGEVAGDYSRDWKGTFDMTLLVTQIVWLGVNIFLTHKLKPELFANTEFWMLQIPKLGCMIAVSILAGLLCRHFCPADENGYIMTSKNSWFKVNYTRKVQHFAAYLVPLLFTPSVNCDCKGTLELSWGVWATMIGFLVMIKPVRETIPLFMLQFNGLDRPE 807 +TI W + L+ P L+LV + LR +W +SP P++ + T +S G + GE AGDY DW TFD L+ + +L V + LT+ +LF N EFW+ Q+PK+ CM+ VS+L GL+CRHFC D+ GYIMT+KNS FKVNYTRK+QHFAAY+VPL+ ++ KG L L+WG + TMIGFLV+IKPVRE++ FMLQFN LDRPE Sbjct: 17 DTIVHWAQHLTTVQTATLVGLPILSLVLIYVLLRWIWKPTSSSPTYSLPLAQSVPHYGATTQNASP------------------------------QGDICHEGEAAGDYDDDWTHTFDYVFLLGMVGYLVVMLVLTYFFHADLFTNPEFWLSQLPKVACMMLVSLLGGLICRHFCRVDQKGYIMTNKNSAFKVNYTRKLQHFAAYMVPLV----LHTSFKGPLALAWGDFFTMIGFLVLIKPVRESLSFFMLQFNSLDRPE 244
BLAST of mRNA_H-paniculata_contig10649.424.1 vs. uniprot
Match: A0A6G0WU79_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WU79_9STRA) HSP 1 Score: 207 bits (528), Expect = 1.230e-61 Identity = 110/261 (42.15%), Postives = 152/261 (58.24%), Query Frame = 1 Query: 28 TIASWP-DVPNSSYWVLLSFPFLTLVACVIWLRVLWPCPDASPKRFEPVSMKIADKTEATSLSSGTSNGAYSSIEAGIANSTTATVSDSSSGSSGSGRVLEAGEVAGDYSRDWKGTFDMTLLVTQIVWLGVNIFLTHKLKPELFANTEFWMLQIPKLGCMIAVSILAGLLCRHFCPADENGYIMTSKNSWFKVNYTRKVQHFAAYLVPLLFTPSVNCDCKGTLELSWGVWATMIGFLVMIKPVRETIPLFMLQFNGLDRPE 807 T A+WP ++ W L+ P L+LV + LR +W K V + KT+ Y S +A + G + E G+VAGDY W TFD+T L+ +V+L V + LT+ + F NT FW+ Q+PKL CM+ VS++ GL+CR FC D+ GYI+T+KNS FKVNYTRK+QHFAAY+VPL+ ++ + G + L+WG + TMIGFLV+IKP+RE++ FMLQFN LDRPE Sbjct: 9 TTAAWPANMTKFELWTLVGLPILSLVLIYVLLRWIW-------KVVAHVPLPTTTKTQ------------YGSTDAD---------------KNAQGVLCEEGDVAGDYEESWTKTFDLTFLIGMVVYLVVMVVLTYIYHIDYFTNTSFWLSQLPKLVCMMVVSLIGGLICRCFCTVDDKGYIITNKNSAFKVNYTRKLQHFAAYMVPLV----LHTNFSGPIALAWGDFFTMIGFLVLIKPIRESLSFFMLQFNSLDRPE 231
BLAST of mRNA_H-paniculata_contig10649.424.1 vs. uniprot
Match: A0A8K1FL63_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FL63_PYTOL) HSP 1 Score: 207 bits (527), Expect = 2.320e-61 Identity = 109/261 (41.76%), Postives = 150/261 (57.47%), Query Frame = 1 Query: 28 TIASWP-DVPNSSYWVLLSFPFLTLVACVIWLRVLWPCPDASPKRFEPVSMKIADKTEATSLSSGTSNGAYSSIEAGIANSTTATVSDSSSGSSGSGRVLEAGEVAGDYSRDWKGTFDMTLLVTQIVWLGVNIFLTHKLKPELFANTEFWMLQIPKLGCMIAVSILAGLLCRHFCPADENGYIMTSKNSWFKVNYTRKVQHFAAYLVPLLFTPSVNCDCKGTLELSWGVWATMIGFLVMIKPVRETIPLFMLQFNGLDRPE 807 T+ WP ++ + WVL P ++LV + LRV+W P P+ S E T+L+ T ++E GEVAGDY W TFD L+ I++ V + LT PEL ++ +FW++Q+PKLG M+ VS+L GL+CR+FC DE GYI+T+K+S FKVNYTRK+QHFAAY+VPL+ + + G L L+WG + +M+GFLV+IKP+RE LFMLQFN LDRPE Sbjct: 13 TLPVWPHNMTTTEGWVLALIPAVSLVLIYVLLRVVWKVPTPLPRYTSAPSYGTTPADETTALNQITKPKTS---------------------------LVEEGEVAGDYQESWLRTFDFVFLIGMILYFIVMLILTDIYAPELLSSLDFWLMQLPKLGVMMFVSLLGGLVCRYFCDVDEKGYIITNKSSKFKVNYTRKLQHFAAYMVPLV----IKSEGHGPLGLAWGDFFSMLGFLVLIKPIRENSKLFMLQFNSLDRPE 242
BLAST of mRNA_H-paniculata_contig10649.424.1 vs. uniprot
Match: A0A1V9ZIB7_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZIB7_9STRA) HSP 1 Score: 207 bits (526), Expect = 8.850e-61 Identity = 106/260 (40.77%), Postives = 147/260 (56.54%), Query Frame = 1 Query: 37 SWPD-VPNSSYWVLLSFPFLTLVACVIWLRVLWPCPDAS--PKRFEPVSMKIADKTEATSLSSGTSNGAYSSIEAGIANSTTATVSDSSSGSSGSGRVLEAGEVAGDYSRDWKGTFDMTLLVTQIVWLGVNIFLTHKLKPELFANTEFWMLQIPKLGCMIAVSILAGLLCRHFCPADENGYIMTSKNSWFKVNYTRKVQHFAAYLVPLLFTPSVNCDCKGTLELSWGVWATMIGFLVMIKPVRETIPLFMLQFNGLDRPE 807 SW D + + ++ PF+ L+ ++LR +W P+ + PK P DK + + E G+VAGDY W TFDM LV +++L V + LTH PE F T+FW++Q+PKLGCM+AVS++ G++CR FC D GYI+T+K+S FKVNYTRK+QHFAAY+VPL+ ++ + G L L+WG TM+GFLV+IKP+RE+ FMLQFN LDRPE Sbjct: 57 SWADNITFAEQATIVGLPFVALILIYVFLRCIWKVPEGTSLPKFAGPKYGSTDDKDHKIKKEKSS--------------------------------LCEEGDVAGDYEASWTKTFDMVFLVGMVIYLIVLLVLTHFYAPEYFTTTDFWLMQLPKLGCMMAVSLIGGIICRCFCDVDSKGYIITNKSSVFKVNYTRKLQHFAAYMVPLV----IHSNYHGPLALAWGDLFTMLGFLVLIKPIRESATFFMLQFNSLDRPE 280
BLAST of mRNA_H-paniculata_contig10649.424.1 vs. uniprot
Match: A0A6G0X3C0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X3C0_9STRA) HSP 1 Score: 206 bits (524), Expect = 1.010e-60 Identity = 109/263 (41.44%), Postives = 149/263 (56.65%), Query Frame = 1 Query: 28 TIASWPD-VPNSSYWVLLSFPFLTLVACVIWLRVLWPCPDAS--PKRFEPVSMKIADKTEATSLSSGTSNGAYSSIEAGIANSTTATVSDSSSGSSGSGRVLEAGEVAGDYSRDWKGTFDMTLLVTQIVWLGVNIFLTHKLKPELFANTEFWMLQIPKLGCMIAVSILAGLLCRHFCPADENGYIMTSKNSWFKVNYTRKVQHFAAYLVPLLFTPSVNCDCKGTLELSWGVWATMIGFLVMIKPVRETIPLFMLQFNGLDRPE 807 T ASW + + W ++ P +TL I LR +WP P PK P DK + ++ T + SS + E GEVAGDY W TFDM L+ + +L + + LT P+ F++T FW++Q+PKLGCM+ VS+L G++CR FC D+ GYI+T+KNS FKVNYTRK+QHFAAY+VPL+ + + G L L+WG + TMIGF ++IKP+RE+ MLQFN LDRPE Sbjct: 30 THASWAEHITAVELWTIILLPVVTLFLIYILLRCIWPIPQNQGLPKFAGPKYGSTDDKPQLNTI----------------------TKKEKSS-------LCEEGEVAGDYEESWTKTFDMVFLIFMLTYLIILLVLTALYSPQYFSDTTFWLMQLPKLGCMMLVSLLGGIICRCFCSVDDKGYIITNKNSAFKVNYTRKLQHFAAYMVPLV----IKSNYHGPLALAWGDFFTMIGFFILIKPLRESSSFLMLQFNSLDRPE 259
BLAST of mRNA_H-paniculata_contig10649.424.1 vs. uniprot
Match: A0A024TYM2_9STRA (Uncharacterized protein n=8 Tax=Aphanomyces TaxID=100860 RepID=A0A024TYM2_9STRA) HSP 1 Score: 205 bits (522), Expect = 1.170e-60 Identity = 107/260 (41.15%), Postives = 145/260 (55.77%), Query Frame = 1 Query: 37 SWPD-VPNSSYWVLLSFPFLTLVACVIWLRVLWPCPD--ASPKRFEPVSMKIADKTEATSLSSGTSNGAYSSIEAGIANSTTATVSDSSSGSSGSGRVLEAGEVAGDYSRDWKGTFDMTLLVTQIVWLGVNIFLTHKLKPELFANTEFWMLQIPKLGCMIAVSILAGLLCRHFCPADENGYIMTSKNSWFKVNYTRKVQHFAAYLVPLLFTPSVNCDCKGTLELSWGVWATMIGFLVMIKPVRETIPLFMLQFNGLDRPE 807 SW D + + ++ P +TL + LR +WP P A PK P +K TS+ S+ + E GEVAGDY W TFDM L+ +++L V + LT+ PE F + FW++Q+PKLGCM+ VS++ G++CR FC D+ GYI+T+KNS FKVNYTRK+QHFAAY+VPL+ + + G L L WG + TM+GF V+IKP RE + FMLQFN LDRPE Sbjct: 13 SWADDISLAQRLTIILLPVVTLFLIFVLLRWIWPVPQGQALPKFAGPKYGATDEKLSLTSIKKEKSS------------------------------LCEEGEVAGDYEDSWVNTFDMVFLIFMLLYLAVMVVLTYYFSPEYFTDPTFWLMQLPKLGCMMLVSLIGGIICRCFCTVDDKGYIITNKNSAFKVNYTRKLQHFAAYMVPLV----IKSNYHGPLALGWGDFFTMLGFFVLIKPFRENMSFFMLQFNSLDRPE 238
BLAST of mRNA_H-paniculata_contig10649.424.1 vs. uniprot
Match: T0QRL0_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QRL0_SAPDV) HSP 1 Score: 205 bits (522), Expect = 2.590e-60 Identity = 108/261 (41.38%), Postives = 150/261 (57.47%), Query Frame = 1 Query: 34 ASWPD-VPNSSYWVLLSFPFLTLVACVIWLRVLWPCPDAS--PKRFEPVSMKIADKTEATSLSSGTSNGAYSSIEAGIANSTTATVSDSSSGSSGSGRVLEAGEVAGDYSRDWKGTFDMTLLVTQIVWLGVNIFLTHKLKPELFANTEFWMLQIPKLGCMIAVSILAGLLCRHFCPADENGYIMTSKNSWFKVNYTRKVQHFAAYLVPLLFTPSVNCDCKGTLELSWGVWATMIGFLVMIKPVRETIPLFMLQFNGLDRPE 807 +SW D + + ++ P + L+ I+LR +W P+ + PK P DK + S+ + E G+VAGDY W TFDM L+ I++L V + LT+ PE F++ +FW++Q+PKLGCM+AVS+L GL+CR FC D GYIMT+K+S FKVNYTRK+QHFAAY+VPL+ ++ + G L L WG + TM+GFLV+IKP+RE+ FMLQFN LDRPE Sbjct: 42 SSWADHITLTQQVTIIGLPIVALILIYIFLRCIWKVPEGNSLPKFAGPKYGSTDDKDALNKIKKEKSS------------------------------LCEEGDVAGDYDAPWTQTFDMIFLLGMILYLVVLLVLTYLYAPEYFSSIDFWLIQLPKLGCMMAVSLLGGLVCRCFCEVDGKGYIMTNKSSVFKVNYTRKLQHFAAYMVPLV----IHSNYHGPLALGWGDFFTMLGFLVLIKPIRESATFFMLQFNSLDRPE 268 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10649.424.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig10649.424.1 >prot_H-paniculata_contig10649.424.1 ID=prot_H-paniculata_contig10649.424.1|Name=mRNA_H-paniculata_contig10649.424.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=269bp MGLSYTLHETIASWPDVPNSSYWVLLSFPFLTLVACVIWLRVLWPCPDASback to top mRNA from alignment at H-paniculata_contig10649:350..5412- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig10649.424.1 ID=mRNA_H-paniculata_contig10649.424.1|Name=mRNA_H-paniculata_contig10649.424.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5063bp|location=Sequence derived from alignment at H-paniculata_contig10649:350..5412- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig10649:350..5412- >mRNA_H-paniculata_contig10649.424.1 ID=mRNA_H-paniculata_contig10649.424.1|Name=mRNA_H-paniculata_contig10649.424.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1614bp|location=Sequence derived from alignment at H-paniculata_contig10649:350..5412- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |