mRNA_H-paniculata_contig17641.4200.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig17641.4200.1 vs. uniprot
Match: D8LQK4_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQK4_ECTSI) HSP 1 Score: 83.6 bits (205), Expect = 7.190e-16 Identity = 55/149 (36.91%), Postives = 79/149 (53.02%), Query Frame = 1
Query: 1 DGLANVNETISFNYTIGNNGSTSLLDVCLTDANFGSGCLDCTAPGIGIVSPGAIFTCDFIYEVNQDDIDRGEVDCSATITAQSSLAHDVEGSAVTTVVLNHEASINIVETGVWMDRDSTTYPDEGESVVYTIVVSNEGTVTLQDIVVAD 447
DGLAN+ E +S TI N+G+TSL+ C+T ++F GC C+ +SPGA FTC EV Q DID G++ + I++ S D S T V L + + I TG + S G++V Y +SN+GT T+ + V D
Sbjct: 21 DGLANIGEKVSHACTIKNDGTTSLVSFCITSSSFNEGCQACSEADA--LSPGANFTCTIDTEVQQTDIDAGQMVTTVDISSVDSQEGDATVSNATLVSLTNTNVLAIEATGSY--TGSNLAAGLGDTVSYEYSISNDGTTTMSRLTVED 165
BLAST of mRNA_H-paniculata_contig17641.4200.1 vs. uniprot
Match: UPI0018A72E4B (DUF11 domain-containing protein n=1 Tax=Winogradskyella marina TaxID=2785530 RepID=UPI0018A72E4B) HSP 1 Score: 80.9 bits (198), Expect = 1.170e-15 Identity = 55/161 (34.16%), Postives = 84/161 (52.17%), Query Frame = 1
Query: 1 DGLANVNETISFNYTIGNNGSTSLLDVCLTDANFGSGCLDCTAP--GIGIVSPGAIFTCDFIYEVNQDDIDRGEVDCSATITAQSS--------LAHD--VEGSAVTTVVLNHEASINIVETGVWMDRDSTTYPDEGESVVYTIVVSNEGTVTLQDIVVAD 447
DG AN+ ETI++N+T+ N G ++ DV LTDA G + G I+ I+ Y + Q DID G V A +T SS L+ D V +T L E+ I +++TGV+ D +S Y + GE++ Y+ V+N+G T+ D+V+ D
Sbjct: 6 DGYANIGETITYNFTVTNQGEDTITDVVLTDAMLGGEVSLASGDDNGDNILDVDEIWLYAASYTITQADIDAGMVSNQAVVTGTSSTDGSTLEDLSDDDTVFEDDITDTELPLESGIAVIKTGVFNDENSDGYANIGETITYSFTVTNQGQTTITDVVLTD 166
BLAST of mRNA_H-paniculata_contig17641.4200.1 vs. uniprot
Match: UPI001CD2E02C (gliding motility-associated C-terminal domain-containing protein n=1 Tax=Winogradskyella sp. SM1960 TaxID=2865955 RepID=UPI001CD2E02C) HSP 1 Score: 82.8 bits (203), Expect = 1.460e-15 Identity = 57/161 (35.40%), Postives = 84/161 (52.17%), Query Frame = 1
Query: 1 DGLANVNETISFNYTIGNNGSTSLLDVCLTDANFGSGCLDCTAP--GIGIVSPGAIFTCDFIYEVNQDDIDRGEVDCSATITAQSS--------LAHD--VEGSAVTTVVLNHEASINIVETGVWMDRDSTTYPDEGESVVYTIVVSNEGTVTLQDIVVAD 447
DG AN+ ETI++N+T+ N G T++ DV LTDA G + G I+ I+ Y + Q DID G V A +T SS L+ D V +T +L EA I +++TGV+ D +S Y GE++ Y V+N+G T+ D+V+ D
Sbjct: 1717 DGYANLGETITYNFTVTNQGQTTITDVVLTDAMLGGEVSLASGDDNGDNILDVDEIWLYAASYTITQADIDAGIVSNQALVTGTSSTDGSTLEDLSDDDTVFEDDITDTILPLEAGIAVIKTGVFNDENSDGYASLGETITYNFTVTNQGEDTITDVVLTD 1877
BLAST of mRNA_H-paniculata_contig17641.4200.1 vs. uniprot
Match: A0A368ZFC3_9FLAO (Putative repeat protein (TIGR01451 family)/gliding motility-associated-like protein n=1 Tax=Winogradskyella arenosi TaxID=533325 RepID=A0A368ZFC3_9FLAO) HSP 1 Score: 81.6 bits (200), Expect = 3.690e-15 Identity = 53/165 (32.12%), Postives = 86/165 (52.12%), Query Frame = 1
Query: 1 DGLANVNETISFNYTIGNNGSTSLLDVCLTDANFGSGCLDCTAP--GIGIVSPGAIFTCDFIYEVNQDDIDRGEVDCSATITAQSSLAHDVEGSA--------------VTTVVLNHEASINIVETGVWMDRDSTTYPDEGESVVYTIVVSNEGTVTLQDIVVAD 447
DG ANV ETI++N+T+ N G+TS+ DV LTDA G + I+ ++ Y + Q DID G V A +T SS ++GS +T ++L E+ I +++T ++ D +S Y + GE++ Y+ V+N+G T+ D+V+ D
Sbjct: 1332 DGYANVGETITYNFTVTNEGTTSITDVTLTDAMLGGELTLASGDDNNDNILDVDEVWLYAASYSITQSDIDAGIVSNQAVVTGTSS----IDGSTLEDLSDDDTVLEDDITDLILPLESGIAVIKTVLFNDENSDGYANVGETITYSFTVTNQGQATITDVVLTD 1492
BLAST of mRNA_H-paniculata_contig17641.4200.1 vs. uniprot
Match: UPI0015C6D006 (SprB repeat-containing protein n=1 Tax=Winogradskyella wichelsiae TaxID=2697007 RepID=UPI0015C6D006) HSP 1 Score: 79.3 bits (194), Expect = 2.320e-14 Identity = 58/164 (35.37%), Postives = 88/164 (53.66%), Query Frame = 1
Query: 1 DGLANVNETISFNYTIGNNGSTSLLDVCLTDANFG------SGCLDCTAPGIGIVSPGAIFTCDFIYEVNQDDIDRGEVDCSATITAQSS-------LAHD--VEGSAVTTVVLNHEASINIVETGVWMDRDSTTYPDEGESVVYTIVVSNEGTVTLQDIVVAD 447
DG A+ ETI++N+T+ N GSTS+ +V LTDA G SG D + I V ++T + Y + Q DID G V AT+T SS L+ D V +T VL E+ I +++T ++ D ++ Y D GE++ Y V+NEG + + +V+ D
Sbjct: 1328 DGFADSGETITYNFTVTNEGSTSVTNVVLTDAMLGGIITLSSG--DLNSDNILDVDETWLYTGN--YTILQSDIDAGIVSNQATVTGTSSDGSTLTDLSDDDSVLEDDITETVLPQESGIAVIKTSIFNDENTDGYADLGETITYNFTVTNEGELAITSVVLTD 1487
BLAST of mRNA_H-paniculata_contig17641.4200.1 vs. uniprot
Match: A0A239ECW7_9FLAO (Conserved repeat domain-containing protein/gliding motility-associated C-terminal domain-containing protein (Fragment) n=2 Tax=Dokdonia pacifica TaxID=1627892 RepID=A0A239ECW7_9FLAO) HSP 1 Score: 77.0 bits (188), Expect = 1.450e-13 Identity = 53/159 (33.33%), Postives = 80/159 (50.31%), Query Frame = 1
Query: 1 DGLANVNETISFNYTIGNNGSTSLLDVCLTDANF-GSGCLDCTAPGIGIVSPGAIFTCDFIYEVNQDDIDRGEVDCSATITAQSSLAHDVEGSAVTTVVLN---------HEASINIVETGVWMDRDSTTYPDEGESVVYTIVVSNEGTVTLQDIVVAD 447
DG ++V+ETI++ +T+ N G+ SL D+ +TD G +D Y + QDDID G+V AT+ + + V + T VL +A+I I++ GV+ D D+ D GE++ YT V+NEG V+L DIVV D
Sbjct: 523 DGCSDVDETITYTFTVTNEGNVSLSDIVVTDPLIAGITFVDGXXXXXXXXXXXXXXXXTADYAITQDDIDAGQVTNQATVAGTDTNDNPVSDLSDDTSVLEDDPTVTGVCQDAAIAIIKVGVFNDEDADGCSDVGETITYTFTVTNEGNVSLSDIVVTD 681
BLAST of mRNA_H-paniculata_contig17641.4200.1 vs. uniprot
Match: UPI0018A7CF6C (gliding motility-associated C-terminal domain-containing protein n=1 Tax=Winogradskyella marina TaxID=2785530 RepID=UPI0018A7CF6C) HSP 1 Score: 76.3 bits (186), Expect = 2.490e-13 Identity = 53/161 (32.92%), Postives = 81/161 (50.31%), Query Frame = 1
Query: 1 DGLANVNETISFNYTIGNNGSTSLLDVCLTDANFGSGCLDCTAP--GIGIVSPGAIFTCDFIYEVNQDDIDRGEVDCSATITAQSS--------LAHD--VEGSAVTTVVLNHEASINIVETGVWMDRDSTTYPDEGESVVYTIVVSNEGTVTLQDIVVAD 447
DG AN+ ETI++N+T+ N G ++ DV LTD G + G I+ ++ Y + Q DID G V A +T SS L+ D V +T L EA I +++TGV+ D +S Y + GE++ Y V+N+G T+ +V+ D
Sbjct: 6 DGYANIGETITYNFTVTNQGQATITDVVLTDDMLGGELTLASGDDNGDNILDVDEVWLYAASYTITQADIDTGMVSNQALVTGTSSTDGSTLEDLSDDDTVFEDDITDTELPLEAGIAVIKTGVFYDENSDGYANLGETITYNFTVTNQGQTTITYVVLTD 166
BLAST of mRNA_H-paniculata_contig17641.4200.1 vs. uniprot
Match: UPI0013D10EFD (CshA/CshB family fibrillar adhesin-related protein n=2 Tax=Chelativorans TaxID=449972 RepID=UPI0013D10EFD) HSP 1 Score: 75.9 bits (185), Expect = 3.750e-13 Identity = 52/150 (34.67%), Postives = 78/150 (52.00%), Query Frame = 1
Query: 1 DGLANVNETISFNYTIGNNGSTSLLDVCLTDANFGSGCLDCTAPGIGIVSPGAIFTCDFIYEVNQDDIDRGEVDCSATITAQSSLAHDVEGSAVTTVVL-NHEASINIVETGVWMDRDSTTYPDEGESVVYTIVVSNEGTVTLQDIVVAD 447
DG ++ ETI++++ + N G+ +L DV + D + + +PG +SPG T Y Q DID G+V+ +AT T + VE T V + A + I +TG D D D GE++ YT +V+N GTVTL D+ V D
Sbjct: 723 DGFIDLGETITYSFLVTNTGTLTLSDVTVDDEMLRNAQVS-VSPGPQTLSPGGSVTFTATYAPTQGDIDSGQVENTATATGTTPSNIQVESPPDTAQVPPDQTAGLTIDKTGTLNDTDGDRLIDLGETISYTFLVTNAGTVTLTDVTVDD 871
BLAST of mRNA_H-paniculata_contig17641.4200.1 vs. uniprot
Match: A0A6I5VN74_9ACTN (Uncharacterized protein n=2 Tax=Microlunatus sp. Gsoil 973 TaxID=2672569 RepID=A0A6I5VN74_9ACTN) HSP 1 Score: 75.9 bits (185), Expect = 3.800e-13 Identity = 45/140 (32.14%), Postives = 70/140 (50.00%), Query Frame = 1
Query: 28 ISFNYTIGNNGSTSLLDVCLTDANFGSGCLDCTAPGIGIVSPGAIFTCDFIYEVNQDDIDRGEVDCSATITAQSSLAHDVEGSAVTTVVLNHEASINIVETGVWMDRDSTTYPDEGESVVYTIVVSNEGTVTLQDIVVAD 447
I++ Y + NNG+ +L DV + D + G + C P + PG C Y Q D++RG + +AT+T +V S V+ N A+INI++T T + G + YT +V+N G VTL D++V D
Sbjct: 1878 INYTYQVTNNGNVTLDDVQVVDPHAGLSTIACNPPQRSSLDPGDTMQCTAEYTTTQADLNRGGIVNTATVTGTPPAGTEVTDSDSALVIANQSANINIIKTA-----SPTEFGAAGTPITYTYLVTNNGNVTLDDVLVTD 2012
BLAST of mRNA_H-paniculata_contig17641.4200.1 vs. uniprot
Match: UPI002025909D (DUF11 domain-containing protein n=2 Tax=Aeromicrobium sp. Leaf245 TaxID=1736306 RepID=UPI002025909D) HSP 1 Score: 75.5 bits (184), Expect = 5.310e-13 Identity = 47/150 (31.33%), Postives = 81/150 (54.00%), Query Frame = 1
Query: 1 DGLANVNETISFNYTIGNNGSTSLLDVCLTDANFGSGCLDCTAPGIGIVSPGAIFTCDF-IYEVNQDDIDRGEVDCSATITAQSSLAHDVEGSAVTTVVLNHEASINIVETGVWMDRDSTTYPDEGESVVYTIVVSNEGTVTLQDIVVAD 447
DG + ++TI + + + N G+ +L +V LTD G L C G G ++PG C ++ + Q++ D G VD +AT+TAQ+ ++ + T+ + ++ + +T V PD G+ V Y+ +V+N G+ TL D+VVAD
Sbjct: 2314 DGRIDADDTIRYTFVVSNTGTVTLDEVELTDPLVGLDGLPC---GTGGLAPGRSVECAVRVHTITQEEADAGSVDNTATVTAQTPAGEGLDATDSTSTPTSSAVALTLDKTSVAPTDPDANGPDAGDVVAYSFLVTNTGSRTLTDLVVAD 2460 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17641.4200.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig17641.4200.1 >prot_H-paniculata_contig17641.4200.1 ID=prot_H-paniculata_contig17641.4200.1|Name=mRNA_H-paniculata_contig17641.4200.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=149bp DGLANVNETISFNYTIGNNGSTSLLDVCLTDANFGSGCLDCTAPGIGIVSback to top mRNA from alignment at H-paniculata_contig17641:3990..5011- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig17641.4200.1 ID=mRNA_H-paniculata_contig17641.4200.1|Name=mRNA_H-paniculata_contig17641.4200.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1022bp|location=Sequence derived from alignment at H-paniculata_contig17641:3990..5011- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig17641:3990..5011- >mRNA_H-paniculata_contig17641.4200.1 ID=mRNA_H-paniculata_contig17641.4200.1|Name=mRNA_H-paniculata_contig17641.4200.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=894bp|location=Sequence derived from alignment at H-paniculata_contig17641:3990..5011- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |