prot_H-paniculata_contig17574.4177.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17574.4177.1
Unique Nameprot_H-paniculata_contig17574.4177.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length61
Homology
BLAST of mRNA_H-paniculata_contig17574.4177.1 vs. uniprot
Match: D8LJM6_ECTSI (RuvB-like helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJM6_ECTSI)

HSP 1 Score: 113 bits (283), Expect = 2.760e-28
Identity = 53/58 (91.38%), Postives = 57/58 (98.28%), Query Frame = 0
Query:    1 HRALESSLSPIVIFATNRGVCTIRGTDVMAPHGVPVDLLDRMLIVRTMPYSIPEMEQV 58
            +RALESSLSPIVIFATNRGVCTIRGTDV+APHGVPVDLLDRMLI+RTMPYSIPEME +
Sbjct:  316 NRALESSLSPIVIFATNRGVCTIRGTDVLAPHGVPVDLLDRMLIIRTMPYSIPEMEMI 373          
BLAST of mRNA_H-paniculata_contig17574.4177.1 vs. uniprot
Match: A0A7T8K6Z2_CALRO (RuvB-like helicase n=1 Tax=Caligus rogercresseyi TaxID=217165 RepID=A0A7T8K6Z2_CALRO)

HSP 1 Score: 102 bits (253), Expect = 9.820e-26
Identity = 44/58 (75.86%), Postives = 55/58 (94.83%), Query Frame = 0
Query:    1 HRALESSLSPIVIFATNRGVCTIRGTDVMAPHGVPVDLLDRMLIVRTMPYSIPEMEQV 58
            HRALES++SPIVIFATNRG CTIRGTD+M+PHG+P+DLLDR+LI+RT+PYS+ EM Q+
Sbjct:   58 HRALESTISPIVIFATNRGKCTIRGTDIMSPHGIPLDLLDRVLIIRTLPYSMEEMLQI 115          
BLAST of mRNA_H-paniculata_contig17574.4177.1 vs. uniprot
Match: A0A7R9U6L5_9STRA (RuvB-like helicase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6L5_9STRA)

HSP 1 Score: 106 bits (265), Expect = 9.820e-26
Identity = 48/58 (82.76%), Postives = 56/58 (96.55%), Query Frame = 0
Query:    1 HRALESSLSPIVIFATNRGVCTIRGTDVMAPHGVPVDLLDRMLIVRTMPYSIPEMEQV 58
            +RALESSL+PIV+FATNRG+CTIRGTDV+APHGVPVDLLDRMLI+RTMPYS+ EM Q+
Sbjct:  316 NRALESSLAPIVVFATNRGICTIRGTDVLAPHGVPVDLLDRMLIIRTMPYSMEEMVQI 373          
BLAST of mRNA_H-paniculata_contig17574.4177.1 vs. uniprot
Match: A0A835Z988_9STRA (RuvB-like helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z988_9STRA)

HSP 1 Score: 106 bits (265), Expect = 9.820e-26
Identity = 48/58 (82.76%), Postives = 56/58 (96.55%), Query Frame = 0
Query:    1 HRALESSLSPIVIFATNRGVCTIRGTDVMAPHGVPVDLLDRMLIVRTMPYSIPEMEQV 58
            +RALESSLSPIV+FATNRG+CTIRGTDV++PHGVPVDLLDRMLI+RTMPYS+ EM Q+
Sbjct:  316 NRALESSLSPIVVFATNRGICTIRGTDVVSPHGVPVDLLDRMLIIRTMPYSLEEMVQI 373          
BLAST of mRNA_H-paniculata_contig17574.4177.1 vs. uniprot
Match: A0A7S0FMB1_9STRA (RuvB-like helicase n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FMB1_9STRA)

HSP 1 Score: 102 bits (254), Expect = 1.310e-25
Identity = 48/58 (82.76%), Postives = 54/58 (93.10%), Query Frame = 0
Query:    1 HRALESSLSPIVIFATNRGVCTIRGTDVMAPHGVPVDLLDRMLIVRTMPYSIPEMEQV 58
            +R+LES+LSPIV+FATNRGVC IRGTDV+APHGVPVDLLDRMLIVRTMPYS  EM Q+
Sbjct:   86 NRSLESTLSPIVVFATNRGVCKIRGTDVLAPHGVPVDLLDRMLIVRTMPYSHEEMVQI 143          
BLAST of mRNA_H-paniculata_contig17574.4177.1 vs. uniprot
Match: A0A7S2JBM6_9DINO (RuvB-like helicase (Fragment) n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2JBM6_9DINO)

HSP 1 Score: 101 bits (251), Expect = 1.610e-25
Identity = 44/58 (75.86%), Postives = 56/58 (96.55%), Query Frame = 0
Query:    1 HRALESSLSPIVIFATNRGVCTIRGTDVMAPHGVPVDLLDRMLIVRTMPYSIPEMEQV 58
            +RALES+LSPIVIFATNRG+CTIRGTD+++PHG+PVDLLDR++I+RTMPYS+ E+ QV
Sbjct:   92 NRALESTLSPIVIFATNRGICTIRGTDIVSPHGMPVDLLDRLVIIRTMPYSVDEIVQV 149          
BLAST of mRNA_H-paniculata_contig17574.4177.1 vs. uniprot
Match: A0A5A8CKQ0_CAFRO (RuvB-like helicase n=2 Tax=Sar TaxID=2698737 RepID=A0A5A8CKQ0_CAFRO)

HSP 1 Score: 105 bits (263), Expect = 1.910e-25
Identity = 47/58 (81.03%), Postives = 55/58 (94.83%), Query Frame = 0
Query:    1 HRALESSLSPIVIFATNRGVCTIRGTDVMAPHGVPVDLLDRMLIVRTMPYSIPEMEQV 58
            +RALESSLSPIVIFATNRG+CTIRGTDV+APHG+PVDLLDRML++RTMPYS+ E  Q+
Sbjct:  317 NRALESSLSPIVIFATNRGICTIRGTDVLAPHGIPVDLLDRMLVIRTMPYSLEETAQI 374          
BLAST of mRNA_H-paniculata_contig17574.4177.1 vs. uniprot
Match: A0A7S0K7Q8_CAFRO (RuvB-like helicase n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0K7Q8_CAFRO)

HSP 1 Score: 105 bits (263), Expect = 2.110e-25
Identity = 47/58 (81.03%), Postives = 55/58 (94.83%), Query Frame = 0
Query:    1 HRALESSLSPIVIFATNRGVCTIRGTDVMAPHGVPVDLLDRMLIVRTMPYSIPEMEQV 58
            +RALESSLSPIVIFATNRG+CTIRGTDV+APHG+PVDLLDRML++RTMPYS+ E  Q+
Sbjct:  331 NRALESSLSPIVIFATNRGICTIRGTDVLAPHGIPVDLLDRMLVIRTMPYSLEETAQI 388          
BLAST of mRNA_H-paniculata_contig17574.4177.1 vs. uniprot
Match: F0WV07_9STRA (RuvB-like helicase n=3 Tax=Albugo TaxID=65356 RepID=F0WV07_9STRA)

HSP 1 Score: 105 bits (262), Expect = 2.610e-25
Identity = 46/58 (79.31%), Postives = 56/58 (96.55%), Query Frame = 0
Query:    1 HRALESSLSPIVIFATNRGVCTIRGTDVMAPHGVPVDLLDRMLIVRTMPYSIPEMEQV 58
            +RALES+L+PIVIFATNRGVCTIRGTD+ +PHG+P+DLLDRMLI+RTMPYS+ EMEQ+
Sbjct:  316 NRALESTLAPIVIFATNRGVCTIRGTDISSPHGIPLDLLDRMLIIRTMPYSVEEMEQI 373          
BLAST of mRNA_H-paniculata_contig17574.4177.1 vs. uniprot
Match: A0A7S4WAQ7_9STRA (RuvB-like helicase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4WAQ7_9STRA)

HSP 1 Score: 100 bits (250), Expect = 3.130e-25
Identity = 44/58 (75.86%), Postives = 55/58 (94.83%), Query Frame = 0
Query:    1 HRALESSLSPIVIFATNRGVCTIRGTDVMAPHGVPVDLLDRMLIVRTMPYSIPEMEQV 58
            +R+LES+LSPIV+FATNRGVC IRGTDV++PHGVPVDLLDRMLI+RT+PY++ EM Q+
Sbjct:   64 NRSLESTLSPIVVFATNRGVCKIRGTDVLSPHGVPVDLLDRMLIIRTLPYTVEEMMQI 121          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17574.4177.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJM6_ECTSI2.760e-2891.38RuvB-like helicase n=2 Tax=Ectocarpus TaxID=2879 R... [more]
A0A7T8K6Z2_CALRO9.820e-2675.86RuvB-like helicase n=1 Tax=Caligus rogercresseyi T... [more]
A0A7R9U6L5_9STRA9.820e-2682.76RuvB-like helicase n=1 Tax=Pinguiococcus pyrenoido... [more]
A0A835Z988_9STRA9.820e-2682.76RuvB-like helicase n=1 Tax=Tribonema minus TaxID=3... [more]
A0A7S0FMB1_9STRA1.310e-2582.76RuvB-like helicase n=1 Tax=Minutocellus polymorphu... [more]
A0A7S2JBM6_9DINO1.610e-2575.86RuvB-like helicase (Fragment) n=1 Tax=Alexandrium ... [more]
A0A5A8CKQ0_CAFRO1.910e-2581.03RuvB-like helicase n=2 Tax=Sar TaxID=2698737 RepID... [more]
A0A7S0K7Q8_CAFRO2.110e-2581.03RuvB-like helicase n=1 Tax=Cafeteria roenbergensis... [more]
F0WV07_9STRA2.610e-2579.31RuvB-like helicase n=3 Tax=Albugo TaxID=65356 RepI... [more]
A0A7S4WAQ7_9STRA3.130e-2575.86RuvB-like helicase n=1 Tax=Ditylum brightwellii Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..50
e-value: 1.9E-18
score: 69.0
IPR010339TIP49, P-loop domainPFAMPF06068TIP49coord: 1..51
e-value: 4.0E-23
score: 82.2
IPR027238RuvB-likePANTHERPTHR11093RUVB-RELATED REPTIN AND PONTINcoord: 1..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17574contigH-paniculata_contig17574:655..837 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17574.4177.1mRNA_H-paniculata_contig17574.4177.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17574 655..837 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17574.4177.1 ID=prot_H-paniculata_contig17574.4177.1|Name=mRNA_H-paniculata_contig17574.4177.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=61bp
HRALESSLSPIVIFATNRGVCTIRGTDVMAPHGVPVDLLDRMLIVRTMPY
SIPEMEQVCI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010339TIP49_P-loop
IPR027238RuvB-like