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Homology
BLAST of mRNA_H-paniculata_contig10641.418.1 vs. uniprot
Match: D7FQ23_ECTSI (Superoxide dismutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ23_ECTSI) HSP 1 Score: 280 bits (715), Expect = 9.650e-87 Identity = 143/177 (80.79%), Postives = 155/177 (87.57%), Query Frame = 3
Query: 102 IMLARVSTYATRRSVAVGTGRLLSSSTTARAAASLPDLGYDYGELEPAISGEIMKIHHTKHHQAYINNLNASMEKLAAAEADGDVTAIVQLQAAIKFNGGGHLNHSIFWKNLAPTSKGGGKMVTGTLADMIEAQYHSMSGLTQKLSAAAVGVQGSGWAWLGYDKINKRLAIATCANQ 632
+M +RV+ A RR GR++SSS ARA A LPDL YDYGELEPAISGEIMKIHHTKHHQAYINNLNA+MEKLA AEA GDVTAI+QLQAAIKFNGGGHLNHSIFWKNLAP KGGG+MVTGTLADMIEAQYHSM LT+K+SAA+VGVQGSGW WLGYDK+NKRLAIATCANQ
Sbjct: 1 MMFSRVACNAARR--VPSAGRMISSSAAARAPAVLPDLTYDYGELEPAISGEIMKIHHTKHHQAYINNLNAAMEKLADAEAKGDVTAILQLQAAIKFNGGGHLNHSIFWKNLAPVGKGGGEMVTGTLADMIEAQYHSMGELTEKMSAASVGVQGSGWGWLGYDKVNKRLAIATCANQ 175
BLAST of mRNA_H-paniculata_contig10641.418.1 vs. uniprot
Match: A0A835YN63_9STRA (Superoxide dismutase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN63_9STRA) HSP 1 Score: 214 bits (545), Expect = 1.080e-61 Identity = 108/158 (68.35%), Postives = 129/158 (81.65%), Query Frame = 3
Query: 162 RLLSSSTTARAA-ASLPDLGYDYGELEPAISGEIMKIHHTKHHQAYINNLNASMEKLAAAEADGDVTAIVQLQAAIKFNGGGHLNHSIFWKNLAPTSKGGGKMVTGTLADMIEAQYHSMSGLTQKLSAAAVGVQGSGWAWLGYDKINKRLAIATCANQ 632
+LLS+ TA A+ A+LP+LGY Y +LEP I G+IM+IHH+KHH Y+ NLNA+M KLA AEA GDV AIVQLQ AIKFNGGGH+NHSIFWKNLAPTS GGGK+ G+L D I++Q+ S+ GL +KLSAAAVGVQGSGW WL YDK+ +LAIAT ANQ
Sbjct: 18 KLLSAGRTALASQATLPELGYGYKDLEPYIDGQIMEIHHSKHHNTYVTNLNAAMTKLADAEAKGDVGAIVQLQGAIKFNGGGHINHSIFWKNLAPTSAGGGKLECGSLKDAIDSQFGSLDGLKEKLSAAAVGVQGSGWGWLAYDKVACKLAIATTANQ 175
BLAST of mRNA_H-paniculata_contig10641.418.1 vs. uniprot
Match: A0A7S2D386_9STRA (Superoxide dismutase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D386_9STRA) HSP 1 Score: 205 bits (522), Expect = 2.390e-58 Identity = 104/176 (59.09%), Postives = 130/176 (73.86%), Query Frame = 3
Query: 114 RVSTYATRRSVAVGTGRLLSSSTTARAAAS---LPDLGYDYGELEPAISGEIMKIHHTKHHQAYINNLNASMEKLAAAEADGDVTAIVQLQAAIKFNGGGHLNHSIFWKNLAPTSKGGGKMVTGTLADMIEAQYHSMSGLTQKLSAAAVGVQGSGWAWLGYDKINKRLAIATCANQ 632
RV++ RS+ + T + S + A+ S LPDL Y YGELEP I+GEIM+IHH+KHH Y+ NLN + EKLAAAEA GDVTA+VQLQ AIKFNGGGHLNHSIFW+NLAP SKGGG + G LA +I+A++ S + +K++AA V VQGSGW WLGYDK + +A+A CANQ
Sbjct: 1 RVNSEEMMRSIVINTSKFRGISRSVSASRSIFTLPDLKYGYGELEPVITGEIMEIHHSKHHNTYVTNLNIASEKLAAAEAAGDVTAMVQLQGAIKFNGGGHLNHSIFWENLAPPSKGGGGVPEGELAALIDAKFGSFDAMKEKMTAATVAVQGSGWGWLGYDKTSGSVAVACCANQ 176
BLAST of mRNA_H-paniculata_contig10641.418.1 vs. uniprot
Match: A0A7S2SP93_9STRA (Superoxide dismutase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SP93_9STRA) HSP 1 Score: 198 bits (504), Expect = 8.800e-56 Identity = 95/154 (61.69%), Postives = 117/154 (75.97%), Query Frame = 3
Query: 171 SSSTTARAAASLPDLGYDYGELEPAISGEIMKIHHTKHHQAYINNLNASMEKLAAAEADGDVTAIVQLQAAIKFNGGGHLNHSIFWKNLAPTSKGGGKMVTGTLADMIEAQYHSMSGLTQKLSAAAVGVQGSGWAWLGYDKINKRLAIATCANQ 632
S++ ++R+ +LPDL Y YGELEP ISGEIM++HH+KHH Y+ NLNA ME+LA AE GDVT IVQLQ AIKFNGGGHLNHSIFW+NLAP SKGGG TG LA +I+ ++ S + K++AA V VQGSGW WLGYDK + +A+ C NQ
Sbjct: 19 STTASSRSVFTLPDLSYGYGELEPVISGEIMELHHSKHHNTYVTNLNAGMEQLAEAEHKGDVTKIVQLQQAIKFNGGGHLNHSIFWENLAPPSKGGGGEPTGELAALIDKKFGSFDAMKDKMTAATVAVQGSGWGWLGYDKASDSVAVTCCFNQ 172
BLAST of mRNA_H-paniculata_contig10641.418.1 vs. uniprot
Match: F0YBC5_AURAN (Superoxide dismutase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YBC5_AURAN) HSP 1 Score: 194 bits (492), Expect = 4.080e-54 Identity = 96/159 (60.38%), Postives = 116/159 (72.96%), Query Frame = 3
Query: 156 TGRLLSSSTTARAAASLPDLGYDYGELEPAISGEIMKIHHTKHHQAYINNLNASMEKLAAAEADGDVTAIVQLQAAIKFNGGGHLNHSIFWKNLAPTSKGGGKMVTGTLADMIEAQYHSMSGLTQKLSAAAVGVQGSGWAWLGYDKINKRLAIATCANQ 632
T R ++ + AR +LP L YDYG LEP ISG+IM+IHH+KHH Y+ NLNA++E L A A GDVTAIV Q AIKFNGGGHLNHSIFW+NLAP S+GGG TG LA I+A++ + + KLSA VGVQGSGW WLGY+K +LA+ATC NQ
Sbjct: 9 TARAVALRSGARTKFTLPALSYDYGALEPVISGQIMEIHHSKHHNTYVTNLNAAVETLEQATAAGDVTAIVAAQGAIKFNGGGHLNHSIFWENLAPPSEGGGAPPTGALAAAIDAEFGGVDAMKTKLSAMTVGVQGSGWGWLGYNKATGKLALATCPNQ 167
BLAST of mRNA_H-paniculata_contig10641.418.1 vs. uniprot
Match: A0A022PYY3_ERYGU (Superoxide dismutase n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022PYY3_ERYGU) HSP 1 Score: 191 bits (485), Expect = 4.580e-53 Identity = 94/144 (65.28%), Postives = 111/144 (77.08%), Query Frame = 3
Query: 201 SLPDLGYDYGELEPAISGEIMKIHHTKHHQAYINNLNASMEKLAAAEADGDVTAIVQLQAAIKFNGGGHLNHSIFWKNLAPTSKGGGKMVTGTLADMIEAQYHSMSGLTQKLSAAAVGVQGSGWAWLGYDKINKRLAIATCANQ 632
SLPDL Y YG+LEPAISGEIM+IHH KHHQAYI N N S+E+L AA + GD +A+V+LQAAIKFNGGGH+NHSIFWKNLAP S+GGG+ TLA I+ + S+ L QK++A +QGSGW WLG DK KRL IAT ANQ
Sbjct: 26 SLPDLAYGYGDLEPAISGEIMQIHHQKHHQAYITNYNKSLEQLDAAISKGDASAVVKLQAAIKFNGGGHVNHSIFWKNLAPISEGGGEPPKSTLAMAIDNNFGSLEALIQKMNAEGAALQGSGWVWLGLDKEFKRLVIATTANQ 169
BLAST of mRNA_H-paniculata_contig10641.418.1 vs. uniprot
Match: A0A7S3DHC1_9EUKA (Superoxide dismutase n=2 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DHC1_9EUKA) HSP 1 Score: 191 bits (486), Expect = 5.050e-53 Identity = 90/144 (62.50%), Postives = 109/144 (75.69%), Query Frame = 3
Query: 201 SLPDLGYDYGELEPAISGEIMKIHHTKHHQAYINNLNASMEKLAAAEADGDVTAIVQLQAAIKFNGGGHLNHSIFWKNLAPTSKGGGKMVTGTLADMIEAQYHSMSGLTQKLSAAAVGVQGSGWAWLGYDKINKRLAIATCANQ 632
+LPDL YDYG LEP ISG IM++HH+KHH Y+ NLNAS+EKL A+ +GDV+AIVQLQ AIKFNGGGH+NHSIFWKNL +GGG + G L + I A + S+ L KL+ A+ GVQGSGW WLG+D +K L IATCANQ
Sbjct: 41 TLPDLDYDYGALEPFISGHIMELHHSKHHNTYVTNLNASLEKLEEAQKEGDVSAIVQLQQAIKFNGGGHINHSIFWKNLCSPKEGGGVLEDGALKNEINATFGSLENLQTKLNTASAGVQGSGWGWLGFDPTSKSLKIATCANQ 184
BLAST of mRNA_H-paniculata_contig10641.418.1 vs. uniprot
Match: A0A7S4M2S9_9EUKA (Superoxide dismutase n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4M2S9_9EUKA) HSP 1 Score: 189 bits (481), Expect = 2.140e-52 Identity = 86/144 (59.72%), Postives = 107/144 (74.31%), Query Frame = 3
Query: 201 SLPDLGYDYGELEPAISGEIMKIHHTKHHQAYINNLNASMEKLAAAEADGDVTAIVQLQAAIKFNGGGHLNHSIFWKNLAPTSKGGGKMVTGTLADMIEAQYHSMSGLTQKLSAAAVGVQGSGWAWLGYDKINKRLAIATCANQ 632
+LPDL YDYG LEPA+SGEIM IHHTKHHQ Y+ NLNA+ EK+ A+A GD+ A++ LQ AIKFNGGGH+NHSIFW+NL P S+GGG + G L+ I A++ S+ K +A +QGSGW WLGYDK ++ IATCANQ
Sbjct: 35 TLPDLTYDYGALEPAVSGEIMTIHHTKHHQTYVTNLNAAYEKMLDAQAKGDIDAVIALQGAIKFNGGGHVNHSIFWQNLCPISEGGGVLQDGPLSAAITAEFGSLEAFQAKFNATTAAIQGSGWGWLGYDKAADKIKIATCANQ 178
BLAST of mRNA_H-paniculata_contig10641.418.1 vs. uniprot
Match: A0A7S3ZMS2_9STRA (Superoxide dismutase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZMS2_9STRA) HSP 1 Score: 188 bits (478), Expect = 3.750e-52 Identity = 92/149 (61.74%), Postives = 107/149 (71.81%), Query Frame = 3
Query: 186 ARAAASLPDLGYDYGELEPAISGEIMKIHHTKHHQAYINNLNASMEKLAAAEADGDVTAIVQLQAAIKFNGGGHLNHSIFWKNLAPTSKGGGKMVTGTLADMIEAQYHSMSGLTQKLSAAAVGVQGSGWAWLGYDKINKRLAIATCANQ 632
AR A+LP LGY+Y LEP ISG IM++HH+KHH Y+ N NA+ EKLA A AD DVT IV QAAIKFNGGGHLNHSIFW+NLAP S+GGG TG L+ I+A + S + KLS V VQGSGW WLGY+K L +ATCANQ
Sbjct: 15 ARTKATLPALGYEYSALEPVISGTIMELHHSKHHNTYVTNFNAATEKLATAVADDDVTGIVAAQAAIKFNGGGHLNHSIFWQNLAPPSEGGGAPPTGALSAAIDADFGSFDAMKTKLSQMTVAVQGSGWGWLGYNKATDALQLATCANQ 163
BLAST of mRNA_H-paniculata_contig10641.418.1 vs. uniprot
Match: F4QFT0_CAVFA (Superoxide dismutase n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4QFT0_CAVFA) HSP 1 Score: 189 bits (479), Expect = 7.160e-52 Identity = 89/144 (61.81%), Postives = 109/144 (75.69%), Query Frame = 3
Query: 201 SLPDLGYDYGELEPAISGEIMKIHHTKHHQAYINNLNASMEKLAAAEADGDVTAIVQLQAAIKFNGGGHLNHSIFWKNLAPTSKGGGKMVTGTLADMIEAQYHSMSGLTQKLSAAAVGVQGSGWAWLGYDKINKRLAIATCANQ 632
+LPDL YDY LEP I+GEIM+IHH KHHQAY+ NLNAS+EK AAAE+ DV A++ LQ+AIKFNGGGH+NHSIFW NLAP + GG +G LAD I Q+ S+ +K +A V +QGSGW WLGYDK N +L I++CANQ
Sbjct: 26 TLPDLPYDYKALEPVIAGEIMEIHHKKHHQAYVTNLNASLEKYAAAESAKDVAAMIGLQSAIKFNGGGHVNHSIFWTNLAPKNAQGGVSPSGPLADAINQQFGSLEKFIEKFNAQTVAIQGSGWGWLGYDKANSKLVISSCANQ 169
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 281.6 |
| Seed ortholog evalue | 3.3e-73 |
| Seed eggNOG ortholog | 2880.D7FQ23 |
| Preferred name | SOD2 |
| KEGG ko | ko:K04564 |
| KEGG Pathway | ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016 |
| Hectar predicted targeting category | mitochondrion |
| GOs | GO:0000003,GO:0000302,GO:0000303,GO:0000305,GO:0001101,GO:0001306,GO:0001315,GO:0001505,GO:0001666,GO:0001836,GO:0001889,GO:0001976,GO:0002237,GO:0002376,GO:0002520,GO:0002682,GO:0003006,GO:0003007,GO:0003008,GO:0003013,GO:0003018,GO:0003032,GO:0003044,GO:0003068,GO:0003069,GO:0003070,GO:0003073,GO:0003085,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004784,GO:0005488,GO:0005507,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0006091,GO:0006355,GO:0006357,GO:0006518,GO:0006575,GO:0006749,GO:0006790,GO:0006801,GO:0006807,GO:0006915,GO:0006950,GO:0006952,GO:0006970,GO:0006974,GO:0006979,GO:0006996,GO:0007005,GO:0007154,GO:0007165,GO:0007166,GO:0007267,GO:0007275,GO:0007399,GO:0007507,GO:0007568,GO:0007571,GO:0007584,GO:0007610,GO:0007626,GO:0008015,GO:0008144,GO:0008150,GO:0008152,GO:0008217,GO:0008219,GO:0008285,GO:0008340,GO:0008630,GO:0008631,GO:0008637,GO:0009058,GO:0009266,GO:0009295,GO:0009314,GO:0009409,GO:0009410,GO:0009593,GO:0009605,GO:0009607,GO:0009611,GO:0009617,GO:0009628,GO:0009635,GO:0009636,GO:0009651,GO:0009653,GO:0009719,GO:0009725,GO:0009737,GO:0009743,GO:0009790,GO:0009791,GO:0009793,GO:0009838,GO:0009887,GO:0009889,GO:0009891,GO:0009893,GO:0009894,GO:0009908,GO:0009966,GO:0009968,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010038,GO:0010042,GO:0010043,GO:0010154,GO:0010212,GO:0010227,GO:0010259,GO:0010269,GO:0010332,GO:0010468,GO:0010506,GO:0010556,GO:0010646,GO:0010648,GO:0010660,GO:0010661,GO:0010821,GO:0010941,GO:0010942,GO:0012501,GO:0014823,GO:0015980,GO:0016020,GO:0016043,GO:0016209,GO:0016491,GO:0016721,GO:0016999,GO:0017000,GO:0017144,GO:0019219,GO:0019221,GO:0019222,GO:0019430,GO:0019825,GO:0019866,GO:0019899,GO:0022008,GO:0022414,GO:0022607,GO:0022900,GO:0022904,GO:0023051,GO:0023052,GO:0023057,GO:0030097,GO:0030145,GO:0030154,GO:0030182,GO:0030334,GO:0030335,GO:0031090,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031667,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0032364,GO:0032496,GO:0032501,GO:0032502,GO:0032879,GO:0032991,GO:0033043,GO:0033273,GO:0033483,GO:0033554,GO:0033591,GO:0033993,GO:0034021,GO:0034097,GO:0034284,GO:0034391,GO:0034393,GO:0034599,GO:0034614,GO:0034641,GO:0035150,GO:0035206,GO:0035296,GO:0035556,GO:0035690,GO:0035722,GO:0035900,GO:0035902,GO:0036094,GO:0036293,GO:0036296,GO:0036473,GO:0038001,GO:0040012,GO:0040017,GO:0042127,GO:0042221,GO:0042311,GO:0042391,GO:0042493,GO:0042542,GO:0042554,GO:0042592,GO:0042645,GO:0042742,GO:0042743,GO:0042802,GO:0042803,GO:0042981,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043167,GO:0043169,GO:0043207,GO:0043209,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043473,GO:0043523,GO:0043524,GO:0043603,GO:0043933,GO:0044085,GO:0044237,GO:0044249,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045333,GO:0045428,GO:0045429,GO:0045471,GO:0045595,GO:0045596,GO:0045597,GO:0045598,GO:0045599,GO:0045776,GO:0046677,GO:0046686,GO:0046872,GO:0046914,GO:0046983,GO:0048066,GO:0048145,GO:0048147,GO:0048316,GO:0048367,GO:0048437,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048583,GO:0048585,GO:0048608,GO:0048660,GO:0048662,GO:0048666,GO:0048678,GO:0048699,GO:0048731,GO:0048732,GO:0048773,GO:0048856,GO:0048869,GO:0048878,GO:0050665,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050801,GO:0050877,GO:0050880,GO:0050896,GO:0050931,GO:0051093,GO:0051094,GO:0051128,GO:0051147,GO:0051149,GO:0051150,GO:0051152,GO:0051171,GO:0051173,GO:0051186,GO:0051188,GO:0051239,GO:0051240,GO:0051252,GO:0051259,GO:0051260,GO:0051262,GO:0051270,GO:0051272,GO:0051289,GO:0051602,GO:0051606,GO:0051704,GO:0051707,GO:0051716,GO:0051881,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055093,GO:0055114,GO:0060255,GO:0060548,GO:0061008,GO:0061458,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070482,GO:0070671,GO:0070887,GO:0071000,GO:0071236,GO:0071310,GO:0071345,GO:0071349,GO:0071361,GO:0071450,GO:0071451,GO:0071704,GO:0071840,GO:0072359,GO:0072593,GO:0080090,GO:0080134,GO:0080135,GO:0090066,GO:0090567,GO:0097159,GO:0097190,GO:0097193,GO:0097237,GO:0097249,GO:0097305,GO:0097306,GO:0097746,GO:0097755,GO:0098542,GO:0098754,GO:0098771,GO:0098796,GO:0098798,GO:0098800,GO:0098869,GO:0099402,GO:1900239,GO:1900241,GO:1900407,GO:1900408,GO:1901214,GO:1901215,GO:1901342,GO:1901363,GO:1901564,GO:1901700,GO:1901701,GO:1902175,GO:1902176,GO:1902531,GO:1902532,GO:1902882,GO:1902883,GO:1903146,GO:1903201,GO:1903202,GO:1903409,GO:1903426,GO:1903428,GO:1903506,GO:1904018,GO:1904407,GO:1904705,GO:1904706,GO:1905063,GO:1905065,GO:1905459,GO:1905461,GO:1905915,GO:1905917,GO:1905930,GO:1905932,GO:1990748,GO:2000026,GO:2000112,GO:2000145,GO:2000147,GO:2000377,GO:2000379,GO:2001141,GO:2001233,GO:2001234,GO:2001242,GO:2001243 |
| EggNOG free text desc. | oxidoreductase activity, acting on superoxide radicals as acceptor |
| EggNOG OGs | COG0605@1,KOG0876@2759 |
| Ec32 ortholog description | Superoxide dismutase |
| Ec32 ortholog | Ec-01_007760.1 |
| EC | 1.15.1.1 |
| COG Functional cat. | P |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01000 |
| Exons | 4 |
| Model size | 1955 |
| Cds size | 681 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig10641.418.1 >prot_H-paniculata_contig10641.418.1 ID=prot_H-paniculata_contig10641.418.1|Name=mRNA_H-paniculata_contig10641.418.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=227bp
MLARVSTYATRRSVAVGTGRLLSSSTTARAAASLPDLGYDYGELEPAISG
EIMKIHHTKHHQAYINNLNASMEKLAAAEADGDVTAIVQLQAAIKFNGGG
HLNHSIFWKNLAPTSKGGGKMVTGTLADMIEAQYHSMSGLTQKLSAAAVG
VQGSGWAWLGYDKINKRLAIATCANQVLGAIRLSRLCICSLRTVMECLIT
RRVSFSTYFCSCMSYSIQALVIFFRV* back to topmRNA from alignment at H-paniculata_contig10641:27..6315- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig10641.418.1 ID=mRNA_H-paniculata_contig10641.418.1|Name=mRNA_H-paniculata_contig10641.418.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6289bp|location=Sequence derived from alignment at H-paniculata_contig10641:27..6315- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGCTTCGCTGCTTTTGTCATCTACCATAGATGGGTTCCTTCGTTTACACG
TTATAAAAATAGAGTTTTACTTCGACGGCAGAGTATTACGCGATAAGCTA
CATCATGCTCGCAAGGTGCGTACTCAGGGATAAATCTCCCTCCTATCTCA
ATTTCTTGCTAAAAAAATGGACTGCCTGCAATAGACGATATGAGTGATCT
GCTCGTTTCTATGTCGACAGCAACAGCTCTTGCTGGAGACATCATCACAC
CTGCCAAAAAAAAGGCCCGCAGACTCATTAACCCCCTGTGCCTTACTGTA
AAATTCAGGGTCTCAACGTATGCTACGCGCCGTTCCGTGGCCGTCGGCAC
TGGGCGTCTTCTCTCATCTTCCACGACCGCACGCGCAGCTGCCAGCCTGC
CCGACCTGGGGTACGACTATGGAGAGTTGGAGCCTGCCATAAGCGGCGAG
ATCATGAAAATTCACCACACTAAACATCATCAGGTAGGTTTGTCTGTACT
GCACTGTTGTATTTGTTCCCTAGCCTGTTTTTCTGTTCACAGTAGATAGG
CCGGGCAGCGTAATGTGGTGTGCTACCTTCGGACAGTGAGCCTATACTGT
CGTGCGCGTGTATTGATTGAGCGTAGACATTGTATCGACCGTTAGTCTCA
TTTTCTACCCATTCTCGAGTGAAAAACTGTGAGGGCCTAGAAGAACAAGG
GCTTGTGAGCTGGCTCTATTATACACACGAAAGTTGCATTTACGTCCCGT
AACACTCAGAACGCGAGAGTTAAAACTGTCTTGCCGATCTGCCACACGGC
ATGACTGGATATGACAGTACACTGCACGCAAGCATCCCGAGATTAGCCTG
GAGCATACTGCGCGTGACTTGGTTTTGCTTTTAGCAGACGTGAGGGTTAA
GATAACAGACTCGCGGGGGGGGTACGTGATATGTCTGCCCTTTTTTATTG
CTTATTGACATCTAGACCTTCAGGCCAAACTGTCTCGCAGCATTAGACAG
TTTCGGAAACCACGGAAAAACTGAAGAACGAGAAAAACGTCAGTATCGAA
CAATATGGAAGATTCGAACAGCCAACATCGACCAAAATCGCCACACGACA
CCACCTCGAAAAAGAGTTGGAAAATTCCGAGTCTTGCGAGACCTTGGCTG
GTAACCTGTCTGCCGGCTGTTTACCCCGCTGCGGTTTTGGGTGTCTGGTA
TTGATATTTGTGGCATGGCTGTTGATCGTGTCCACTGATGCTCTGATGAC
CTGTCAACAGTAAAACAACAAAATGAACAAACGACACGATGTTGGCGCCG
AGGAGAGCGACTTGTCCGCAACACCTCAGCTCTTGAAGTAAATTGACTGC
CTATCTGCTACGTTCACCATTACTCACTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTGGGCGCTCGGGCGTCTTGTGCTCTGGCTTACGTTTCTTGT
TCATCCATGTTTCCGTTTCGTGTGGCACTTGTTGGTGCAAGCCATACATA
ACACCTTGTTGAGGTAACGCCGCTGGTAAGGTGACATGCAAACGATAGTA
GCAAGAGAAGAAAGAAGAACTGAAATAAAAAGAGAAATGAAAGACTACAA
CTCTCGATCCCTCAGCTCTTAGATGTCTACAAGCTTAACCGTATGTTCCT
TAATTTGCTGTGATTATGACTGAAATGCATGTTGCTGGTGAGTTTGCTCG
CAAATCACTTTGCAAACTATGCCAAATCGACTCCGTGGCGATTCATCGTG
CACTTTAACTTTTTGTGCCTCTTCCTGAGGTTTTCAAGGTGCTTAGTTGG
TCAAGTCCAGTGAACGGTTTTCTTTCCGAAACTGTCTATTATCTCATAGT
TTGAATCTTCCTGGTGTGACTCTTCCTTTGTACCATTTTGAATTAGCTTC
GGTGTGTCAGTTGTCATGAGCCCTATATTATAGAGTTTCCGTATGCTGAA
TGTACATCAGTCAGTGGAACTGAGTTGGGACTGATATCTGAATTACAAGT
GGTGCGAGGACAGACGAAGAAAAATTGTCAATTGCGAAGAGGCGTCCGAA
CACTCTATTCGTGTGTCGAGAAGTTTTGAGTACTCTCTTGGTAGGCAAGC
TCTTACTTCGATTTCTCTCCAAAATTTAATATCAACAAACGTTTTTCAAC
CCAACCCAGATAGGAAGAGAAATGACTTAGGCTAAGGAACGGTGCGGATG
CGATGGCTACAAAAGGCAGCCTCGTCACTAGCGCGCTGGCCTCGCAAGTT
GACAGAATACGGCATGATCGCGGAGTAGCATCACACACGAAAATATCGTA
AGCTTCACCCCCTCCGGCCAACGTTATCCTGGATCAGCCGCGGTAATTTT
CTCGCGCTAGTCACAGCTGTCTGAACCAGGCAGATGTCAAAAGCCGAGCC
AACGAGATGTAACACGTTCGCAAACAAGGCTCTGGTCCCTGTCAAGTGTC
CACCAGCAGGATGGAACGTAGTCATGGTGCCTTTACCCGAAAGATACATT
CAAACATGCATTGCCCTTACGAGTTCCTGATGTAGCTGAAGTTCTATACC
CTAGATGTTGCTACTTACTAGAATGGCGAATCCCAGGTGGCGCTGTAAGT
AGAAAATGAAAGAGGACGGCGCCTCGTCTGACCGACACAGATGATTGTGA
ACGCAAGATCCAATTTTCTTTTTTGATGATATTCATCTCTAAATCCACTC
TGGGGCTGTGGATCTCGCCATCTGTTTCTGTTACACCCGTACTACTACCT
CCGTTCCCTCCATTCTCTTTCCTTCCTGCCTATAGAGCAAACGGGTACAA
CATGCCTGCGATCCACTTGCTGCCCACCATCCTTTTACCGTTGTTGTGTA
ACGGTACTCCTCGATTCGTGCGCTGCTTGACTTCCTTGCCCTGCCGCCAC
AACCAGCATACACATAATTCATCACCCCTGAATATTTGAGTGGTCACTAG
ACGAGCTATCAGATGAACTCCTCCCTATCTGCGGGCTATCTGGAGCGATA
CATGTACACACGGAAAATGGAACCTTCTGCTTATGATTATGTGGTTTGTG
TGATGTTTCAATCGCAAAGGATCACATGGGCAACTAGAACAAGAAACGAC
CGCCTTCACTCTACAGGACTCCGCTCCAATGTCGTTGTCGCGTTTTGGTT
ACGTGTTCTTGTTGTATTGTATTCGCACAGGATCGCATGAAAAACAAACA
TGTGAGAAAAACAATCGCCTTCATACATGATTGCATCACTACCTATATTG
CGGTACCAGCCAGCACCCCACACGAATTCGAATATTTGTGATGGTGTACC
ATTCCTTCCTCGCTGTTCAGAGACATTTTCGCGCTATTGTGATAGATTCT
CGTCAATGGCGATATGATGTTATTGTTGATGTTTGAAGGAATCGGAATTT
GGAGTCAAAAACACGAAACAACGCGGAGCACAGCACTAAAACACCCTTTG
CTTGTTGCAAACACACACGACTTATACAAGCTCGATTCGGGGCAGTGCCC
GGCGCGCCGAAGGATTCAATGAGCCGTGGAAAAGAGGTAGCACCCCCCCC
CTGCTTGAGTTATTCACTTGTGCTGATGAATATCACGTGGCTCATGTGAT
AACCACGGCATGCGTAGCTGTTGAAAACAAGGATTGAAAAAAACTGAAAC
CTCCTGCGTAAATAAATCTCCCCAAGTGAACCGTTATCTGAGGTGTCATA
ATTCATGATAGTTGAACCCCCCCCCCCCGCGTGCGCCCGTGGTTGTTCTT
ATGGGTCTGATGAAATAAGCTAGTCAAAGGTTGTAGCCCACACAACCTGA
GCATGTACGTGTTAGTGTAACGAGAGTATAATAGATGGAGACCACTTCGA
AGACGGAGTACGGGTCGATTGGTCAATGCTAGGTTCTTGGGTAATAAGTG
GAGCTGTGTGTGTGGTGGGTCATGTTCGCTTTACCCCCCGCCCTTTTCGG
TGTCTTCCTTTGCAACGCAGGCCTACATCAACAACCTGAATGCGTCGATG
GAAAAGTTGGCGGCCGCGGAGGCCGATGGCGACGTGACGGCCATCGTGCA
ACTTCAAGCTGCCATCAAGTTTAACGGGGGTGGACACCTCAATCACTCGA
TCTTTTGGAAGGTGAGGGTAACAGATGCAACACACTTAGGAGAGGATATG
GATGGCATTTTGTCTTGTCGCCTACATGTGTTTTGTGTTTTGCTCGTTTT
TTTTGTTTTTAAGATTGGAGAGCTTTTGCGTGATGGCAAGACTTGTTTGC
TTTCGAGTTTCGCCAGTTACGAGGCCCCGCTACTATGACTACGTAGTATG
AAATACCAAGAAATACAACTAAACAAGCGATTTCTTCATCGGAAAGTCTT
CTTGAGATTTCATCAACCATTAATACTGATTTTGAGCTGATTTCGACCTA
TTCCGCTGTGTCCGGGAAAAAAAACAAACGTGTTTAGACACTCGGTTTTC
AACCATGTCGAATTCGTTTGTTTTTTTTTGGAAGATCTGCATGTAAGCTC
GACGTGTAGGTTTTCGAGTAATATGCTATGGTTTTCACGAAAAACCTCAA
ATTGCGAAAGATATTCCCAAAATACCGTCATTAGCCAGAGTTATGGGACA
GGGGTAGTATATTACATCTGAATGCAAATCAAACATTGAGAATTCCCCTC
CTCGAAAGACAAAACACGAAAGTTAATATTGATGTGATAACATATTCCTT
TGTGTTGTGCTCTTTGGCTTGGGTACCGTTTTGCTATGCGTACTTACCCC
CCGTGGCCCGCACAGAACCTTGCTCCGACAAGCAAGGGAGGCGGGAAAAT
GGTGACTGGCACCCTGGCAGATATGATCGAGGCACAGTACCACTCCATGT
CGGGGCTCACCCAAAAGCTCAGCGCTGCGGCCGTCGGCGTGCAGGGGTCG
GGGTGGGCCTGGCTCGGCTACGACAAGATCAACAAGCGGTTAGCGATCGC
CACCTGCGCCAACCAGGTGCTTGGTGCCATCCGTTTGTCCCGACTCTGTA
TTTGTAGTTTACGTACAGTCATGGAGTGTCTTATAACCAGACGCGTGTCA
TTTTCAACTTATTTTTGTTCATGTATGTCATACTCCATCCAGGCGCTTGT
TATTTTCTTCCGTGTGTGAGTGCGATCTGTGGTTGATTTATTTTCCGACG
GCCCGAAAAACTTCTTGTATTTGTGTAAATATATCTTCGTTGTTTGTATT
TCGTAGTCTGCCTTCTGTTGGCTGATAACGCACCGCCCCCCGCTCCCGCC
TCCGTGTTGCTGCATCGCCAGTGCTGTTGAGCGTCATCGATATTTGTTAA
GCGTCCCAACAACGCAAGTGGTGTTTTCCGTGAATTTCAAGGGCCCCGAT
AAAGCGCTTCATGTTCCTTGTCAAGTTGTATATGCCCAATGAAATCTCAA
AGGGGCCAGGGTAAATACCCCGCCCTGTATCTGACACCATCCTTCACGGT
TTGAGATGCTACTTTTTGGTGTACATGACAGCCTTTAGGAGGTGAAAAAA
ATCCCTTACATCCAGGTGCCCCTCTTGCAAAAAATTTCGACGTGCGATAT
CTGGCAATCCCGTGTCGCTAAAGGGGGGCGGAGTACCTAATGACGAAATA
ATTGCTTGGATGGGGTGAGATCAGACCCGTGTGTCGACAACATACGAAAA
ATAGTACAACAAGATTGCGACGCTAGGTGCGGAAGCGCAAAACATGTTTG
ATAGTGTTTCGCGCACGTCAAAGGCTGGTTACGGCAGCCGCAATGACATG
TGGTTGATGTAAAGACATACCGGAGTACACTCATCAGTCTTATCGAGCGG
TGGCAGTCAGCTGGACAGCGCAACCAGAAGGATCCCGTAGAAGTGTGTAA
GGTGGGTAAAGCAGTACAGTTGGTGTACTACTGCATGGGGCACCATACCT
GCGATACAAGTTGAAGAGAGAGGAAAAAGCTGGCGGGTGCCGGCATATTC
CGAAAGTTTCGTAGCGAGCAATAACCGCTGCGTGTTTGGCGTCGTGTTAT
GACAGTACCCGCAAGCACCTCAGCAGGCGGTCTACCACAGTCGTGCCAGT
CGGAGCATAACACGACTGATATATATCGTAATCAGTAATTAGGCGTTGGG
TGTCCCGAACAAAGGTGTACCCCCCAGACAAACACCAATAAATACGAGAA
ATCCGGAACGAATATTGTAGTTTTTTGGGGGTTTTTTTACCCCCGGAAGG
TCGAGGCAAAAACCTTTTCCGCTGCTTCCACTCTCGGAAGATTACTGAGT
GTCTGCATTTCCTTTAATGGATCAGAGTTATTTGTTCCT back to topCoding sequence (CDS) from alignment at H-paniculata_contig10641:27..6315- >mRNA_H-paniculata_contig10641.418.1 ID=mRNA_H-paniculata_contig10641.418.1|Name=mRNA_H-paniculata_contig10641.418.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1362bp|location=Sequence derived from alignment at H-paniculata_contig10641:27..6315- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCTCGCAAGATGCTCGCAAGGGTCTCAACGTATGCTACGCGCCGTTCC
GTGGCCGTCGGCACTGGGCGTCTTCTCTCATCTTCCACGACCGCACGCGC
AGCTGCCAGCCTGCCCGACCTGGGGTACGACTATGGAGAGTTGGAGCCTG
CCATAAGCGGCGAGATCATGAAAATTCACCACACTAAACATCATCAGGGT
CTCAACGTATGCTACGCGCCGTTCCGTGGCCGTCGGCACTGGGCGTCTTC
TCTCATCTTCCACGACCGCACGCGCAGCTGCCAGCCTGCCCGACCTGGGG
TACGACTATGGAGAGTTGGAGCCTGCCATAAGCGGCGAGATCATGAAAAT
TCACCACACTAAACATCATCAGGCCTACATCAACAACCTGAATGCGTCGA
TGGAAAAGTTGGCGGCCGCGGAGGCCGATGGCGACGTGACGGCCATCGTG
CAACTTCAAGCTGCCATCAAGTTTAACGGGGGTGGACACCTCAATCACTC
GATCTTTTGGAAGGCCTACATCAACAACCTGAATGCGTCGATGGAAAAGT
TGGCGGCCGCGGAGGCCGATGGCGACGTGACGGCCATCGTGCAACTTCAA
GCTGCCATCAAGTTTAACGGGGGTGGACACCTCAATCACTCGATCTTTTG
GAAGAACCTTGCTCCGACAAGCAAGGGAGGCGGGAAAATGGTGACTGGCA
CCCTGGCAGATATGATCGAGGCACAGTACCACTCCATGTCGGGGCTCACC
CAAAAGCTCAGCGCTGCGGCCGTCGGCGTGCAGGGGTCGGGGTGGGCCTG
GCTCGGCTACGACAAGATCAACAAGCGGTTAGCGATCGCCACCTGCGCCA
ACCAGGTGCTTGGTGCCATCCGTTTGTCCCGACTCTGTATTTGTAGTTTA
CGTACAGTCATGGAGTGTCTTATAACCAGACGCGTGTCATTTTCAACTTA
TTTTTGTTCATGTATGTCATACTCCATCCAGGCGCTTGTTATTTTCTTCC
GTGTGTGAAACCTTGCTCCGACAAGCAAGGGAGGCGGGAAAATGGTGACT
GGCACCCTGGCAGATATGATCGAGGCACAGTACCACTCCATGTCGGGGCT
CACCCAAAAGCTCAGCGCTGCGGCCGTCGGCGTGCAGGGGTCGGGGTGGG
CCTGGCTCGGCTACGACAAGATCAACAAGCGGTTAGCGATCGCCACCTGC
GCCAACCAGGTGCTTGGTGCCATCCGTTTGTCCCGACTCTGTATTTGTAG
TTTACGTACAGTCATGGAGTGTCTTATAACCAGACGCGTGTCATTTTCAA
CTTATTTTTGTTCATGTATGTCATACTCCATCCAGGCGCTTGTTATTTTC
TTCCGTGTGTGA back to top
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