prot_H-paniculata_contig1752.4150.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1752.4150.1
Unique Nameprot_H-paniculata_contig1752.4150.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1636
Homology
BLAST of mRNA_H-paniculata_contig1752.4150.1 vs. uniprot
Match: D8LKG5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKG5_ECTSI)

HSP 1 Score: 214 bits (544), Expect = 5.680e-52
Identity = 201/592 (33.95%), Postives = 286/592 (48.31%), Query Frame = 0
Query:   23 LGHRSLLLHWEVKRHQAWWKKVLDRGLLTRLAEHASSKALLARTAA---------EHSHVALLKRAGDVLCERTKKRAGG--GKLSSLVDRAAQAAGGSVQDQELAAILCGCCDGW------RTDVLFTPLAVEDGHRSQRAPGAEGALASVVHADARWDALDLEVTRLSNRRGLGSSGTAYQVRKKAGAFTEAVGHTRRVGGKVVVHPDVEGGEPPVRLVDEIRRARQWHDRHSACFIPLAWAVSAAFAAKWECSG--GDADSVTRGEDSDNSGSRGGRGKGKKKGGSGGKA-------SVRRPSPSSVLALVAAFLDKESTAKGFISGSLKAMFGGGPRVSFGKINPNLGELLLLFMSFLKGLGT------------TQHTV--GALEL----------SGDGTVSQQQPSAAE---KRASQGDVRDRAIRLSVDGRAVQDITDVRVVSLLRRTCDSVQLALTPNAACGLPVWGNDPRWSLLGHVLGSSA-----ETGGVIEEVVDRGVPAASRCYLTWMDDLLEMCEEHDEGGMCTGLPGFTLTGSTTKQSSKAAAQLSKRHSADIRKARLADAAFVAATTPGGSLAAQ 556
            LG R+  LH E+KRH+AWW+++L + +L  LA+  SS     +  A          H HV LL+  G           GG  G + +L      AAG  ++ +ELAAI+CG           R  V  T   +E+  R +R     G  A++   D   +A      R   +RG G S     V +  G   E+        G+VV+       +    LV +++RA+ WHDRH ACF+P+AWAV AA AAKW   G  G    V      +N G+R  RG     G S  +          R+PSP S+LAL+AAFLDK+S A+G      KA FG GP  +  K NPN+GE+ L F S+++ LG             T + +  G LE+          +  G   Q+    AE   +  + G  +   IR+ V G+ ++D+ D  +VS LRR C +++ +LTP+ A GLPVWG D RWSLLG  L  S      E+ G + +  + G P+    YL WM+  L+MC       M  G+ GF +TG     + +A A L ++H+AD+ +AR AD  F AA    GS AA+
Sbjct:   18 LGSRTTTLHPELKRHRAWWREILSKNVLRALADRVSSPPAAEKGHAPSSLLVEGERHPHVDLLEDLGAFFSAGGTIDGGGASGVVGALATVVGDAAGSDLESKELAAIICGSGKHLGTVRLVRKAVRGTKPLIEE-LRDERLSKL-GLTAAIGGYDDTVEASTAYEVRRLPQRGRGGS-----VLQPGGGGDESS------SGRVVLLQCNNLDDKVAALVTKVKRAKCWHDRHPACFLPVAWAVCAAVAAKWPTDGDLGGGAGVMW----ENGGARNRRG-----GVSAARVLERARARKARQPSPFSILALLAAFLDKDSKARGVS----KATFGAGPSPTCAKHNPNIGEIFLRFCSYVRQLGVKPGRRKSAGPPATMNLLDSGELEMWWSAAAAVAATPKGKKPQRSDRGAETEPEEIAMGQDQADLIRVQVGGKVLEDLVDAALVSGLRRACAAIEQSLTPDGARGLPVWGQDIRWSLLGFALEQSQGENDEESEGRVGKKKE-GQPS----YLDWMEIRLQMCMNDGIDEM-PGMYGFNVTG-RAPLAPEAIANLDRQHAADVLQARTADVVFSAALQVHGSAAAE 576          
BLAST of mRNA_H-paniculata_contig1752.4150.1 vs. uniprot
Match: A0A6H5KUD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUD4_9PHAE)

HSP 1 Score: 140 bits (354), Expect = 1.320e-29
Identity = 124/359 (34.54%), Postives = 172/359 (47.91%), Query Frame = 0
Query:  208 GKVVVHPDVEGGEPPVRLVDEIRRARQWHDRHSACFIPLAWAVSAAFAAKW----ECSGGDADSVTRGEDSDNSGSRGGRGKGKKKGGSGGKASVRRPSPSSVLALVAAFLDKESTAKGFISGSLKAMFGGGPRVSFGKINPNLGELLLLFMSFLKGLGTTQHTVGALELSGDGTVSQQQPSAAEKRASQGDVRDRAIRLSVDGRAVQDITDVRVVSLLRRTCDSVQLALTPNAACGLPVWGNDPRWSLLGHVLGSSA------ETGGVIEEVVDRGVPAASRCYLTWMDDLLEMCEEHDEGGMCTGLPGFTLTGSTTKQSSKAAAQLSKRHSADIRKARLADAAFVAATTPGGSLAAQ 556
            G+VV+       +    LV +++RA+ WHDRH ACF+P+AWAV AA AAKW    +  GG   S   G      G R  R + +K          RRPSP S+LAL+AAFLDK     G   G  K+    GP  +   ++   GEL + + +             A+  +  G   Q+    AE    +           V G+ ++D+ D  + S LRR C +++ +LTP+ A GLPVWG D RWSLLG     S         GGV E+    G P+    YL WM+  L+MC       M  G+ GF +TG     + +A A L ++H+AD+ +AR AD  F AA   GG    Q
Sbjct:   76 GRVVLLQFKNLDDEVAALVTKVKRAKCWHDRHPACFLPVAWAVCAAVAAKWPSDGDLGGGPGASCEHGAP----GCRLARARARK---------ARRPSPFSILALLAAFLDK----LGVKPGRRKSA---GPPATLNLLDS--GELEMWWSA-----------AAAVAAAPKGKKPQRSDREAEAETGE------LATGQVGGKVLEDLVDAALASDLRRACAAIEQSLTPDGARGLPVWGQDIRWSLLGFAFEQSEGENDEESEGGVGEK--REGRPS----YLDWMEIRLQMCMNEGIDEM-PGMYGFNVTG-RAPLAPEAIANLDRQHAADVLQARTADVVFSAALQVGGGSQGQ 387          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1752.4150.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKG5_ECTSI5.680e-5233.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KUD4_9PHAE1.320e-2934.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 837..883

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1752contigH-paniculata_contig1752:6336..23125 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1752.4150.1mRNA_H-paniculata_contig1752.4150.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1752 6059..23505 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1752.4150.1 ID=prot_H-paniculata_contig1752.4150.1|Name=mRNA_H-paniculata_contig1752.4150.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1636bp
MTSDGGPATGAAGAGAGAAGRLLGHRSLLLHWEVKRHQAWWKKVLDRGLL
TRLAEHASSKALLARTAAEHSHVALLKRAGDVLCERTKKRAGGGKLSSLV
DRAAQAAGGSVQDQELAAILCGCCDGWRTDVLFTPLAVEDGHRSQRAPGA
EGALASVVHADARWDALDLEVTRLSNRRGLGSSGTAYQVRKKAGAFTEAV
GHTRRVGGKVVVHPDVEGGEPPVRLVDEIRRARQWHDRHSACFIPLAWAV
SAAFAAKWECSGGDADSVTRGEDSDNSGSRGGRGKGKKKGGSGGKASVRR
PSPSSVLALVAAFLDKESTAKGFISGSLKAMFGGGPRVSFGKINPNLGEL
LLLFMSFLKGLGTTQHTVGALELSGDGTVSQQQPSAAEKRASQGDVRDRA
IRLSVDGRAVQDITDVRVVSLLRRTCDSVQLALTPNAACGLPVWGNDPRW
SLLGHVLGSSAETGGVIEEVVDRGVPAASRCYLTWMDDLLEMCEEHDEGG
MCTGLPGFTLTGSTTKQSSKAAAQLSKRHSADIRKARLADAAFVAATTPG
GSLAAQGTAGRGWVGAAVNAFGQQHAGENAGGGDDDDNDATMSVVDGDAD
KISTLSSSLYEGSDIDGEEMDENNPLLRQPRPTAGDILEGGSEGDGAGAA
SSPAQSTTGDGATVAMRSRMGTSVSRSGGGWETVAEGVESVVEASDKMED
VLARGERVLQEAARMVAAAKAASGVASSKGRGVRDVAPGVGGKSAATEAS
GQPGKECASSSTGVPADPLSKQIDDVNPSTRGRVMQGEEQGKQMTADDAA
VSATPRSREVTERERARALAKERGRERGKQRQQQCEKERLLKLKELVRKR
ERKLETEAREKRRQEEEWEAEALRAERRKTRLERWERGTERRTVGIKEEM
GKSVLREADEVDDNGNRDGDLKQKGTDSSGSSSSSSDSSSDRSESHSQTQ
SRDCRSGSSNGASVRGERRGRNGTDSSDNRVSSSTASRSPRAARVLGSSR
DGSSCVAEGISVNRRGESGTRAEYIAVSNLSGDGVKASGDAEQGHGESKW
SPWRSVSSSNDSEDADDVVKGAMLTPAVDKGNEELAETTDAHTFRAHRSS
SGSVDGSDVAHRRLGRSVDGSLDWRYVQTNSQYNTRSRANSVESNDVDWR
IRSRKRQVIVDVGGAAGRGSNRTHRPVSGDHRVITEREMEESRPQSKRRA
RNSRSISNSTERRPRRLSRSRERQRDPSQSRERRYVQERGQFGRNADDRR
PGWSPVGDRRHRNARSERSRDRSRSIERGRARSPSSHNLQSGARPLRSGS
NEANHSRSLITQRRAHDCRSRSREGRSRDDDRPGGSRSRNNSRPRQSRSQ
ESRSPQEELPTTTAGMLEAGAQGTMMGSAISVGSVRQAGNVKSIGPGRKG
MMASSASTAAAACAAISAKVSAQGGADIAYNPTAVANAVHGTGWPVIHLQ
IPATTSLDQAGTASPTTAAVQTLAEEGCADSGHSTGRDGVRSGVKGTFAA
VPTSMKRDVNWSGVVDLPHSSTWKSLGKSSPHDSPWRPNPLPETEQTAQG
QPSLPLPLPLPLPPPPPSRLRPSFDTQMEGLAQRSAAAVAEVEGGGAAAQ
DDRSAVRRGPAFPDAMHTESLSGLAGDGAEPYLLT*
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