mRNA_H-paniculata_contig175.4144.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig175.4144.1 vs. uniprot
Match: D7FGR1_ECTSI (OTU domain-containing protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGR1_ECTSI) HSP 1 Score: 385 bits (990), Expect = 1.100e-124 Identity = 224/435 (51.49%), Postives = 268/435 (61.61%), Query Frame = 2
Query: 353 DKANERQEKARLKKDRQRNSNHHYRSDEDDRQFELQIRQLGCRINFMAGDGNCLFRSLADQIEGKPQDHAELRAQVVNHLEHNRQVFEPYMEDDEPFDEYIKRMRCDAEWGGNQELVAASQLYKTNVVVHQFQAPRFFIPFEKARRTMHLSYHGEHHYNSVRAIGDEGGGPAMVIMLHNPGSGKDPGDAAAKGAGNK-SSPWPQQEEVVAQSCPWATPASVVDALHATGGREDDAIELLVAAQNEPALGELGTDDVTSGREHADATTEASGPPAYHEAPPSGQAGGVSTGSGAGMQESNTQDIAHGANGGGPADASSNGKAGSSQRKDREGVCAIGAAPKYGVGGRKHGNTNGGPLPSSAGPANLAPKEKKGVKKITRGADCHCGSGLKYKKCCRKKDAAIARGQIAGPAEYSTVDCGDGAGDSNFSDDLGALVI 1654
DKA ER E+ARL+KDR RNS Y S DDR FE Q+ Q+GC+I F+ GDGNCLFRSLADQ+EG+ +DH+ +RA+V++HL+ NR+VFEPYMEDDE F +Y++RMR +AEWGGNQELVAASQLYKTNVVVHQF+APRFFIP EKARRT+HLSYHGEHHYNSVRAIGDE GPA+ I L P +KG +K SPWP++E VA+SCPWA+P ++V AL TGGR DDAIELL+AA+NEP L E G D+ ++ G G E G S K +E NG P +A K +K KK+ R +DC CGSGLKYKKCCRKKDAAIARGQI PAE D +GDS+ DDLG+LVI
Sbjct: 17 DKAKERNERARLRKDRMRNSL--YSSSADDRDFEAQVEQIGCKIKFIQGDGNCLFRSLADQLEGRSEDHSSVRAKVMDHLQRNREVFEPYMEDDETFGDYLERMRGEAEWGGNQELVAASQLYKTNVVVHQFKAPRFFIPCEKARRTIHLSYHGEHHYNSVRAIGDEANGPALPITLQTP---------TSKGGSHKRESPWPEEEAAVARSCPWASPPNIVAALETTGGRGDDAIELLIAARNEPGL-EEGVDNTAGDKK------------------------------GTGKLEDG----------------------GDSGEKPQE---------------------NGRPGEGKGRGGGVAKKSEKAAKKVARASDCPCGSGLKYKKCCRKKDAAIARGQIDAPAEP------DASGDSSVVDDLGSLVI 360
BLAST of mRNA_H-paniculata_contig175.4144.1 vs. uniprot
Match: A0A6V1PSA8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PSA8_HETAK) HSP 1 Score: 226 bits (575), Expect = 6.810e-63 Identity = 162/425 (38.12%), Postives = 223/425 (52.47%), Query Frame = 2
Query: 431 DEDDRQFELQIRQLGCRINFMAGDGNCLFRSLADQIEGKPQDHAELRAQVVNHLEHNRQVFEPYMEDDEPFDEYIKRMRCDAEWGGNQELVAASQLYKTNVVVHQFQAPRFFIPFEKA--RRT--MHLSYHGEHHYNSVRAIGDEGGGPAMVIMLHN---PGSGKDPGDAAAKGAGNKSSPWPQQE-EVVAQSCPWATPASVVDALHATGGREDDAIELLVAAQNEPALGELGTDDVTSGREHADATTEASGPPAYHEAPPSGQAGGVSTGSGAGMQESNTQDIAHGANGGGPADASSNGKAGSSQRKDREGVCAIGAAPKYGVGGRKHGNTNGGPLPSSAGPANLAPKEKKGVKKITRGADCHCGSGLKYKKCCRKKDAAIARGQIAGPAEYSTVDCGDGAGDSNFSD---------DLGALVI 1654
D++DR+F LQ+ +GCRI F++GDGNC+FRS+ADQIEG P++H + R ++++H+E + +F +MEDDEPF Y+ RMR D +WGG+QEL AASQL++T ++VHQ+QAPR I FE A RR +HLSYHGE HYNSVRA+GD GGGP + I L P G A G G + P ++ E+V S PWA A V A+ G AIEL+V+ + L +D + +++T E + E+ V S A QE N + D SS S+ + D VC G +G + ++A +TRGA C CGSGLKYKKCCRK+D R + ++ +C DGA + N D D G+L I
Sbjct: 50 DDEDRKFALQLASIGCRIKFISGDGNCMFRSIADQIEGNPENHRDFRNRIMDHIEAHGDLFALFMEDDEPFAGYLSRMRADRQWGGHQELYAASQLFRTTILVHQYQAPRLEISFEGADGRRPHPLHLSYHGESHYNSVRAVGDPGGGPPLPINLRQSAPPSKRAGGGPAPGGGEGKQQGPGTAEDWELVRLSVPWADGALVERAMARARGEGIQAIELIVSGEVY-----LEEEDQSPHTSQSESTGEGNTGADSKES--------VVHSSQASNQECNNLNPEE------EGDQSS-----STSKAD---VCENGG---------DESTLSGRTIKNNA---------------VTRGAKCPCGSGLKYKKCCRKRDLLKKR------IQSNSAECNDGAEEWNGHDVPGGDDSLQDFGSLAI 417
BLAST of mRNA_H-paniculata_contig175.4144.1 vs. uniprot
Match: A0A7S2WLR9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WLR9_9STRA) HSP 1 Score: 173 bits (439), Expect = 7.540e-44 Identity = 107/263 (40.68%), Postives = 145/263 (55.13%), Query Frame = 2
Query: 437 DDRQFELQIRQLGCRINFMAGDGNCLFRSLADQIEGKPQDHAELRAQVVNHLEHNRQVFEPYMEDDEPFDEYIKRMRCDAEWGGNQELVAASQLYKTNVVVHQFQAPRFFIPF---EKARRTMHLSYHGEHHYNSVRAIGDEGGGPAMVIMLHNPGSGKDPGDAAAKGAGNKSSPWPQQ----EEVVAQSCPWATPASVVDALHATGGREDDAIELLVA----------------AQNEPALGELGTDDVTSGREHADATTEA 1156
+D F+ Q+ +G RI + GDGNC+FRS++DQ+ G +H E R +V+ + R+ FEP++EDDE FD+YI+RM D EWGG+QEL AA+Q Y N+V+HQ APR + E A T+HLSYHGE HYNSVRA D G GPA I + P P AAA G ++ S + E+ V S PW + L G D A+ELLV+ +QN A+G +G + S AD++ EA
Sbjct: 67 EDLNFDGQMAAVGLRIVSITGDGNCMFRSISDQLCGVQANHWEYRKHIVDFINAEREQFEPFIEDDESFDDYIQRMGSDGEWGGHQELYAATQAYNVNIVIHQLDAPRLELYASQPEFATATLHLSYHGEFHYNSVRAADDFGPGPAQAIAMDRP-----PMPAAATGGTDRGSSSAENLSAVEKQVRISVPWVDLEVIRGTLREVNGDADAAVELLVSGFIPPDPAAEGDHDAVSQNPGAIGVVGGEVAASSAGSADSSPEA 324
BLAST of mRNA_H-paniculata_contig175.4144.1 vs. uniprot
Match: W7U4L0_9STRA (SEC-C motif-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U4L0_9STRA) HSP 1 Score: 152 bits (384), Expect = 4.750e-37 Identity = 72/143 (50.35%), Postives = 98/143 (68.53%), Query Frame = 2
Query: 425 RSDEDDRQ-FELQIRQLGCRINFMAGDGNCLFRSLADQIEGKPQDHAELRAQVVNHLEHNRQVFEPYMEDDEPFDEYIKRMRCDAEWGGNQELVAASQLYKTNVVVHQFQAPRFFIPFEKARRTMHLSYHGEHHYNSVRAIGD 850
R D+D+ Q F + LG RI M DGNCLFR+LADQ+ G+P+DH E+R V++ +E + F P++EDDE F +Y+ RMR + EWGG QE+ AAS+ + NVV+HQ PRF I F+ + T+HLS+HG HYNS+RA D
Sbjct: 44 RFDKDEEQRFMQHVEDLGARILTMDSDGNCLFRALADQLRGRPEDHGEIRQHVIDFIEAHETDFAPFVEDDEKFSDYVHRMRNEGEWGGQQEICAASRCFHVNVVIHQLDCPRFEILFKASAPTIHLSFHGASHYNSIRAWDD 186
BLAST of mRNA_H-paniculata_contig175.4144.1 vs. uniprot
Match: M4F7R4_BRARP (OTU domain-containing protein n=2 Tax=Brassica TaxID=3705 RepID=M4F7R4_BRARP) HSP 1 Score: 151 bits (381), Expect = 2.110e-36 Identity = 95/245 (38.78%), Postives = 137/245 (55.92%), Query Frame = 2
Query: 446 QFELQIRQLGCRINFMAGDGNCLFRSLADQIEGKPQDHAELRAQVVNHLEHNRQVFEPYMEDDEPFDEYIKRMRCDAEWGGNQELVAASQLYKTNVVVHQFQAPRFFIP-FEKAR-RTMHLSYHGEHHYNSVRAIGDEGGGPAMVIMLHNPGSGKDPGDAAAKGAGNKSSPWPQQEEVVAQSCPWATPASVVD-------ALHATGGREDDAIELLVAAQNEPALGELGTDDVTSGREHADATTE 1153
QF Q+ LG +I + DGNC FRSLADQ+EG +H++ R+ VV ++ NR++FEP++EDD PF++Y K M D W GN EL AAS + ++N+ +H+ +PR++I F+ AR R +HLSYH HYNSVR+ D GGPA +++ AK +KS + +V A S D L G D AIE L+A Q +L E ++T+G+E +D+T E
Sbjct: 35 QFRAQLDALGLKIIQVTADGNCFFRSLADQLEGNEDEHSKYRSMVVQYIVKNREMFEPFIEDDVPFEDYCKTMDDDGTWAGNMELQAASLVTRSNICIHRSMSPRWYIRNFDDARTRMIHLSYHDGEHYNSVRSKEDACGGPARPVVIEADAK-VSAASKQAKATESKSKTRSDKCDVDAGDVKVVMSGSCCDNAEKAEQVLVQVNGDVDAAIEFLIAEQGIESLTENAA-EITNGKEASDSTME 277
BLAST of mRNA_H-paniculata_contig175.4144.1 vs. uniprot
Match: A0A2I0J5W1_PUNGR (OTU domain-containing protein n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0J5W1_PUNGR) HSP 1 Score: 143 bits (360), Expect = 1.190e-35 Identity = 68/148 (45.95%), Postives = 99/148 (66.89%), Query Frame = 2
Query: 446 QFELQIRQLGCRINFMAGDGNCLFRSLADQIEGKPQDHAELRAQVVNHLEHNRQVFEPYMEDDEPFDEYIKRMRCDAEWGGNQELVAASQLYKTNVVVHQFQAPRFFIP-FEK-ARRTMHLSYHGEHHYNSVRAIGDEGGGPAMVIML 883
QF Q+ LG +I + DGNC FR+LADQ+EG +H + R+ VV ++ NR++FEP++ED+ PF+EY + M D W G+ EL AAS + ++N+ +H+ +PR++I FEK R +HLSYH E HYNSVR D G GPA +++
Sbjct: 29 QFRAQVDALGLKIVQVTADGNCFFRALADQLEGNEDEHGKYRSMVVQYILKNREMFEPFIEDEVPFEEYCQTMENDGTWAGHMELQAASLVTRSNICIHRSMSPRWYIRNFEKPGSRMIHLSYHDEEHYNSVRLREDHGDGPARPVLI 176
BLAST of mRNA_H-paniculata_contig175.4144.1 vs. uniprot
Match: A0A397XSF9_BRACM (OTU domain-containing protein n=11 Tax=Brassica TaxID=3705 RepID=A0A397XSF9_BRACM) HSP 1 Score: 149 bits (375), Expect = 1.440e-35 Identity = 94/245 (38.37%), Postives = 136/245 (55.51%), Query Frame = 2
Query: 446 QFELQIRQLGCRINFMAGDGNCLFRSLADQIEGKPQDHAELRAQVVNHLEHNRQVFEPYMEDDEPFDEYIKRMRCDAEWGGNQELVAASQLYKTNVVVHQFQAPRFFIP-FEKAR-RTMHLSYHGEHHYNSVRAIGDEGGGPAMVIMLHNPGSGKDPGDAAAKGAGNKSSPWPQQEEVVAQSCPWATPASVVD-------ALHATGGREDDAIELLVAAQNEPALGELGTDDVTSGREHADATTE 1153
QF Q+ LG +I + DGNC FRSLADQ+EG +H + R+ VV ++ NR++FEP++EDD PF++Y K M D W GN EL AAS + ++N+ +H+ +PR++I F+ AR R +HLSYH HYNSVR+ D GGPA +++ AK +KS + +V A S D L G D AIE L+A + +L E ++T+G+E +D+T E
Sbjct: 36 QFRAQLDALGLKIIQVTADGNCFFRSLADQLEGNEDEHCKYRSMVVQYIVKNREMFEPFIEDDVPFEDYCKTMDDDGTWAGNMELQAASLVTRSNICIHRSMSPRWYIRNFDDARTRMIHLSYHDGEHYNSVRSKEDACGGPARPVVIEADAK-VSAASKQAKATESKSKTRSDKCDVDAGDVKVVMSGSCCDNAEKAEQVLVQVNGDVDAAIEFLLAERGMESLTENAA-EITNGKEASDSTME 278
BLAST of mRNA_H-paniculata_contig175.4144.1 vs. uniprot
Match: V4MIM5_EUTSA (OTU domain-containing protein n=2 Tax=Eutrema salsugineum TaxID=72664 RepID=V4MIM5_EUTSA) HSP 1 Score: 148 bits (373), Expect = 2.500e-35 Identity = 99/284 (34.86%), Postives = 148/284 (52.11%), Query Frame = 2
Query: 377 KARLKKDRQRNSNHHYRSDEDDRQFELQIRQLGCRINFMAGDGNCLFRSLADQIEGKPQDHAELRAQVVNHLEHNRQVFEPYMEDDEPFDEYIKRMRCDAEWGGNQELVAASQLYKTNVVVHQFQAPRFFIP-FEKAR-RTMHLSYHGEHHYNSVRAIGDEGGGPAMVIMLHNPGSGKDPGDAAAKGAGNKSSPWPQQEEVVAQSCPWATPASVV-------------DALHATGGREDDAIELLVAAQNEPALGELGTD-----DVTSGREHADATTEASGPP 1168
KA+ +K + + H D D QF Q+ LG +I + DGNC FR+LADQ++G +H++ R+ VV ++ NR++FEP++EDD PF++YIK M D W GN EL AAS + + N+ +H+ +PR++I FE AR R +HLSYH HYNSVR D GGPA +++ DA A ++ + A C +VV L G D AI+ L+A Q +L E ++ D+ + E +D+T E++ P
Sbjct: 3 KAKPQKSKLKKQPHQQGKDCDLSQFRTQLDALGLKIIQVTSDGNCFFRALADQLQGNEDEHSKYRSMVVQYIVKNREMFEPFIEDDVPFEDYIKTMDDDGTWAGNMELQAASLVTRCNICIHRNMSPRWYIRNFEDARTRMIHLSYHDGEHYNSVRLKEDACGGPATPVVIE--------ADAKVSAASKQAKAIESNSKSRADKCKVDAAINVVMSGSCYDNAEKAEQVLVQVNGDVDAAIDFLIAEQGMESLTENDSETTSVADIKNREEASDSTMESTKKP 278
BLAST of mRNA_H-paniculata_contig175.4144.1 vs. uniprot
Match: V9FCY7_PHYPR (OTU domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=V9FCY7_PHYPR) HSP 1 Score: 145 bits (367), Expect = 3.000e-35 Identity = 86/214 (40.19%), Postives = 129/214 (60.28%), Query Frame = 2
Query: 437 DDRQFELQIRQL---GCRINFMAGDGNCLFRSLADQIEGKPQDHAELRAQVVNHLEHNRQVFEPYMEDDEPFDEYIKRMRCDAEWGGNQELVAASQLYKTNVVVHQFQAPRFFIPFE----KARRTMHLSYHGEHHYNSVRAIGDEGGGPAMVIMLHNPGSGKDPGDAAAK----GAGNKSSPWPQQEEVVAQSCPWATPASVVDALHATGGRE 1045
DD EL RQL GC+++ + DGNCLFR+L DQ+ G H E+R ++V++LE +R FEP+MED+E F++Y +RMR D WGGNQEL AA++L++ VVVHQ Q + E K R +H++YHGE HY+SVRA+ D ++ + + G P D A + + ++S+ Q E+ V + P TP + VD+L + G++
Sbjct: 49 DDGAIELMRRQLADVGCKLHEVEADGNCLFRALGDQLYGDQHQHEEVRKKIVSYLEQHRDDFEPFMEDEEKFEKYCERMREDGTWGGNQELYAAARLFQVYVVVHQDQPSARIMVIECDRLKPTRFVHVAYHGEDHYDSVRALKDPVDPDSLPVSIELDWDGFRPEDFAKRWQTHASASESTSDGQPEQRVVPNIPTDTPDAEVDSLASRLGKQ 262
BLAST of mRNA_H-paniculata_contig175.4144.1 vs. uniprot
Match: A0A0D3E2I9_BRAOL (OTU domain-containing protein n=10 Tax=Brassiceae TaxID=981071 RepID=A0A0D3E2I9_BRAOL) HSP 1 Score: 147 bits (372), Expect = 3.330e-35 Identity = 94/245 (38.37%), Postives = 136/245 (55.51%), Query Frame = 2
Query: 446 QFELQIRQLGCRINFMAGDGNCLFRSLADQIEGKPQDHAELRAQVVNHLEHNRQVFEPYMEDDEPFDEYIKRMRCDAEWGGNQELVAASQLYKTNVVVHQFQAPRFFIP-FEKAR-RTMHLSYHGEHHYNSVRAIGDEGGGPAMVIMLHNPGSGKDPGDAAAKGAGNKSSPWPQQEEVVAQSCPWATPASVVD-------ALHATGGREDDAIELLVAAQNEPALGELGTDDVTSGREHADATTE 1153
QF Q+ LG +I + DGNC FRSLADQ+EG +H++ R+ VV ++ NR++FEP++EDD PF++Y K M D W GN EL AAS + ++N+ +H+ +PR++I FE +R R +HLSYH HYNSVR+ D GGPA +++ AK KS + +V A + S D L G D AIE L+A + +L E D+T+ +E +D+T E
Sbjct: 34 QFRAQLDSLGLKIIQVTADGNCFFRSLADQLEGNEDEHSKYRSMVVQYIVKNREMFEPFIEDDVPFEDYCKTMDDDGTWAGNMELQAASLVTRSNICIHRSMSPRWYIRNFEDSRTRMIHLSYHDGEHYNSVRSKEDACGGPARPVVIEADAK-VSAASKQAKATECKSKTRSDKCDVDAGAVKVVMSGSCCDNAEKAEQVLVQVNGDVDAAIEFLIAERGMESLTENAA-DITNRKEASDSTME 276 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig175.4144.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig175.4144.1 >prot_H-paniculata_contig175.4144.1 ID=prot_H-paniculata_contig175.4144.1|Name=mRNA_H-paniculata_contig175.4144.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=470bp MGKPKDKASKKSQQSSHGGGGGSKGGKGGKDAAKHDKANERQEKARLKKDback to top mRNA from alignment at H-paniculata_contig175:39621..46765+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig175.4144.1 ID=mRNA_H-paniculata_contig175.4144.1|Name=mRNA_H-paniculata_contig175.4144.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7145bp|location=Sequence derived from alignment at H-paniculata_contig175:39621..46765+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig175:39621..46765+ >mRNA_H-paniculata_contig175.4144.1 ID=mRNA_H-paniculata_contig175.4144.1|Name=mRNA_H-paniculata_contig175.4144.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2820bp|location=Sequence derived from alignment at H-paniculata_contig175:39621..46765+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |