prot_H-paniculata_contig17414.4111.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17414.4111.1
Unique Nameprot_H-paniculata_contig17414.4111.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length151
Homology
BLAST of mRNA_H-paniculata_contig17414.4111.1 vs. uniprot
Match: D8LQ03_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ03_ECTSI)

HSP 1 Score: 140 bits (352), Expect = 3.620e-39
Identity = 77/150 (51.33%), Postives = 95/150 (63.33%), Query Frame = 0
Query:    1 MDFALDRPLPDAYWEIKFVVDSVNKRHEIALGATDRRDYPSGVSSMQFQVPRISVEGIMPCELANTGLLVAALKSPSAAYAITDSHLQKQRGNGREEEATLRENYDCGGGGGGTEEKGDMSGEVAAVNLVVQVSDAGRGRLVRCIYSPLE 150
            MDFALDRPL  A+W++KF+VDSVN+RH + LGAT  RDYP G  SM F+VPR+SVEGI PC LANTGLLVA+L           +  ++++ +GRE  A                        VA VNLVVQV+D G+GRL+R IYSPLE
Sbjct:   68 MDFALDRPLAGAWWDVKFLVDSVNERHLVRLGATSERDYPRGSCSMHFEVPRVSVEGIKPCTLANTGLLVASLMRRGGENGEPPASAEEKK-SGREPGADA---------------------VVAQVNLVVQVADVGQGRLMRVIYSPLE 195          
BLAST of mRNA_H-paniculata_contig17414.4111.1 vs. uniprot
Match: F0W2S7_9STRA (Uncharacterized protein AlNc14C10G1310 n=4 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W2S7_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 7.910e-13
Identity = 37/74 (50.00%), Postives = 46/74 (62.16%), Query Frame = 0
Query:    1 MDFALDRPLPDAYWEIKFVVDSVNKRHEIALGATDRRDYPSGVSSMQFQVPRISVEGIMPCELANTGLLVAALK 74
            +DF LDRPL +A W IK++VDSV+ RH I LG   + +Y  G +   F V  I V  I P  L N GLLVA+LK
Sbjct:  115 VDFTLDRPLQNAEWLIKYLVDSVHHRHVIELGTVPKSNYIHGENRFDFSVDSIDVNLIQPSHLTNCGLLVASLK 188          
BLAST of mRNA_H-paniculata_contig17414.4111.1 vs. uniprot
Match: A0A7S0XDV4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XDV4_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 2.420e-12
Identity = 39/89 (43.82%), Postives = 48/89 (53.93%), Query Frame = 0
Query:    3 FALDRPLPDAYWEIKFVVDSVNKRHEIALGATDRRDYPSGVSSMQFQVPRISVEGIMPCELANTGLLVAALKSPSAAYAITDSHLQKQR 91
            F LDR +  AYW IKF+VDS +KR    LG T   DYP G S M F V  I + GI P  L N+GLL+A       A A  +  +  Q+
Sbjct:   52 FELDRDVVAAYWIIKFLVDSTDKRVIRILGETQVEDYPDGESEMIFSVDTIDISGISPSVLTNSGLLMAEFIVDGIAVASVNMVINVQK 140          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17414.4111.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LQ03_ECTSI3.620e-3951.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
F0W2S7_9STRA7.910e-1350.00Uncharacterized protein AlNc14C10G1310 n=4 Tax=Alb... [more]
A0A7S0XDV4_9STRA2.420e-1243.82Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17414contigH-paniculata_contig17414:864..4003 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17414.4111.1mRNA_H-paniculata_contig17414.4111.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17414 450..4862 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17414.4111.1 ID=prot_H-paniculata_contig17414.4111.1|Name=mRNA_H-paniculata_contig17414.4111.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=151bp
MDFALDRPLPDAYWEIKFVVDSVNKRHEIALGATDRRDYPSGVSSMQFQV
PRISVEGIMPCELANTGLLVAALKSPSAAYAITDSHLQKQRGNGREEEAT
LRENYDCGGGGGGTEEKGDMSGEVAAVNLVVQVSDAGRGRLVRCIYSPLE
*
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