prot_H-paniculata_contig17331.4077.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17331.4077.1
Unique Nameprot_H-paniculata_contig17331.4077.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length111
Homology
BLAST of mRNA_H-paniculata_contig17331.4077.1 vs. uniprot
Match: D8LD80_ECTSI (KH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD80_ECTSI)

HSP 1 Score: 207 bits (528), Expect = 6.720e-66
Identity = 103/106 (97.17%), Postives = 106/106 (100.00%), Query Frame = 0
Query:    5 QDAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRHAIENATRTRIVVADQKIHILGSFSNIKVARDAICALILGAPPGKVYNQMRNVARRMNERF 110
            QDAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRHAIENATRTRI+VADQK+HILGSFSNIKVARDAICALILGAPPGKVYNQMRNVARRM+ERF
Sbjct:  138 QDAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRHAIENATRTRIIVADQKVHILGSFSNIKVARDAICALILGAPPGKVYNQMRNVARRMSERF 243          
BLAST of mRNA_H-paniculata_contig17331.4077.1 vs. uniprot
Match: A0A7S2XZF6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZF6_9STRA)

HSP 1 Score: 194 bits (492), Expect = 1.350e-60
Identity = 94/106 (88.68%), Postives = 103/106 (97.17%), Query Frame = 0
Query:    5 QDAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRHAIENATRTRIVVADQKIHILGSFSNIKVARDAICALILGAPPGKVYNQMRNVARRMNERF 110
            QDAVALLRLDDLY+DSF+V+DVK L+GDHLSRAIGRIAGQ GKTRHAIENATRTR+VVADQ+IHILGSF+NI+VARDAIC LILGAPPGKVYNQM+NVARRMNERF
Sbjct:  126 QDAVALLRLDDLYIDSFEVKDVKALSGDHLSRAIGRIAGQDGKTRHAIENATRTRVVVADQRIHILGSFANIRVARDAICNLILGAPPGKVYNQMKNVARRMNERF 231          
BLAST of mRNA_H-paniculata_contig17331.4077.1 vs. uniprot
Match: A0A835ZET5_9STRA (RNA-binding protein PNO1-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZET5_9STRA)

HSP 1 Score: 192 bits (487), Expect = 9.630e-60
Identity = 92/106 (86.79%), Postives = 102/106 (96.23%), Query Frame = 0
Query:    5 QDAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRHAIENATRTRIVVADQKIHILGSFSNIKVARDAICALILGAPPGKVYNQMRNVARRMNERF 110
            QDAVALLRL+DLY+DSF+V+DVK L GDHLSRAIGR+AGQ GKTRHAIENATRTR++VAD +IHILGSF+NI+VARDAICALILGAPPGKVYNQMRNVARRMNERF
Sbjct:  133 QDAVALLRLEDLYIDSFEVRDVKMLQGDHLSRAIGRVAGQDGKTRHAIENATRTRVIVADHRIHILGSFANIRVARDAICALILGAPPGKVYNQMRNVARRMNERF 238          
BLAST of mRNA_H-paniculata_contig17331.4077.1 vs. uniprot
Match: A0A7S3PRC7_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PRC7_9STRA)

HSP 1 Score: 190 bits (482), Expect = 4.740e-59
Identity = 92/105 (87.62%), Postives = 100/105 (95.24%), Query Frame = 0
Query:    6 DAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRHAIENATRTRIVVADQKIHILGSFSNIKVARDAICALILGAPPGKVYNQMRNVARRMNERF 110
            DA+ALLRLDDLYVD+F+++DVKTL GDH+SRAIGRIAGQGGKTR AIENATRTRIV+ADQKIHILGSF NIK+ARDAIC LILGAPPGKVYNQMRNVA RMNERF
Sbjct:  129 DAIALLRLDDLYVDTFEIKDVKTLQGDHMSRAIGRIAGQGGKTRFAIENATRTRIVLADQKIHILGSFQNIKIARDAICKLILGAPPGKVYNQMRNVASRMNERF 233          
BLAST of mRNA_H-paniculata_contig17331.4077.1 vs. uniprot
Match: A0A2R5GT26_9STRA (Pre-rRNA-processing protein pno1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GT26_9STRA)

HSP 1 Score: 186 bits (473), Expect = 1.240e-57
Identity = 92/106 (86.79%), Postives = 100/106 (94.34%), Query Frame = 0
Query:    5 QDAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRHAIENATRTRIVVADQKIHILGSFSNIKVARDAICALILGAPPGKVYNQMRNVARRMNERF 110
            QDAVALLRL+DL+VDSF+V+DVK L GDHLSRAIGRIAGQGGKT++AIENATRTRIVVADQ+IHILGSF NIK+ARDAIC LILGAPPGKVYNQMR VA RMNERF
Sbjct:  132 QDAVALLRLEDLFVDSFEVKDVKMLHGDHLSRAIGRIAGQGGKTKYAIENATRTRIVVADQRIHILGSFQNIKIARDAICKLILGAPPGKVYNQMRTVASRMNERF 237          
BLAST of mRNA_H-paniculata_contig17331.4077.1 vs. uniprot
Match: A0A6T5QRH5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5QRH5_HETAK)

HSP 1 Score: 184 bits (467), Expect = 8.170e-57
Identity = 90/106 (84.91%), Postives = 102/106 (96.23%), Query Frame = 0
Query:    5 QDAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRHAIENATRTRIVVADQKIHILGSFSNIKVARDAICALILGAPPGKVYNQMRNVARRMNERF 110
            QDAVALLRL+DLYVDSF+V+DVK L+GDHLSRAIGR+AGQ GKTR+AIENATRTRIVVADQ+IHILGS++NI+VARDAIC LILGAPPGKVYNQMR VA+RM+ERF
Sbjct:  125 QDAVALLRLEDLYVDSFEVKDVKALSGDHLSRAIGRVAGQDGKTRYAIENATRTRIVVADQRIHILGSYANIRVARDAICNLILGAPPGKVYNQMRAVAKRMSERF 230          
BLAST of mRNA_H-paniculata_contig17331.4077.1 vs. uniprot
Match: A0A3M6VD79_9STRA (KH domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VD79_9STRA)

HSP 1 Score: 183 bits (464), Expect = 2.790e-56
Identity = 87/106 (82.08%), Postives = 101/106 (95.28%), Query Frame = 0
Query:    5 QDAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRHAIENATRTRIVVADQKIHILGSFSNIKVARDAICALILGAPPGKVYNQMRNVARRMNERF 110
            QDAVALLRL+DL++D+F+V DVK L GDHLSRAIGR+AGQ GKT++A+ENATRTRIV+ADQKIHILGSFSNIK+ARDAIC+LI+GAPPGKVYN+MRNVA RMNERF
Sbjct:  131 QDAVALLRLEDLFIDTFEVNDVKMLKGDHLSRAIGRVAGQDGKTKYAVENATRTRIVLADQKIHILGSFSNIKLARDAICSLIMGAPPGKVYNKMRNVASRMNERF 236          
BLAST of mRNA_H-paniculata_contig17331.4077.1 vs. uniprot
Match: A0A1Z5KEX1_FISSO (RNA-binding protein PNO1 n=2 Tax=Bacillariophyta TaxID=2836 RepID=A0A1Z5KEX1_FISSO)

HSP 1 Score: 179 bits (454), Expect = 3.920e-56
Identity = 88/106 (83.02%), Postives = 99/106 (93.40%), Query Frame = 0
Query:    5 QDAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRHAIENATRTRIVVADQKIHILGSFSNIKVARDAICALILGAPPGKVYNQMRNVARRMNERF 110
            QDAVALLRLDDLYV+SFQV DVK L GDHLSRAIGRIAGQ GKTR AIENATRTRIVVADQ+IH+LGS++N++VAR+AIC LILGAPPGKVYN MRNVA+RM+ER+
Sbjct:   30 QDAVALLRLDDLYVESFQVTDVKLLRGDHLSRAIGRIAGQDGKTRFAIENATRTRIVVADQRIHLLGSYANLRVARNAICDLILGAPPGKVYNNMRNVAKRMSERY 135          
BLAST of mRNA_H-paniculata_contig17331.4077.1 vs. uniprot
Match: H3G8F2_PHYRM (KH domain-containing protein n=3 Tax=Peronosporaceae TaxID=4777 RepID=H3G8F2_PHYRM)

HSP 1 Score: 182 bits (461), Expect = 5.210e-56
Identity = 86/106 (81.13%), Postives = 101/106 (95.28%), Query Frame = 0
Query:    5 QDAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRHAIENATRTRIVVADQKIHILGSFSNIKVARDAICALILGAPPGKVYNQMRNVARRMNERF 110
            QDAVALLRL+DL++D+F+V DVK L GDHLSRAIGR+AGQ GKT++A+ENATRTRIV+ADQKIHILGSF+NIK+ARDAIC+LI+GAPPGKVYN+MRNVA RMNERF
Sbjct:  117 QDAVALLRLEDLFIDTFEVNDVKMLKGDHLSRAIGRVAGQDGKTKYAVENATRTRIVLADQKIHILGSFANIKLARDAICSLIMGAPPGKVYNKMRNVASRMNERF 222          
BLAST of mRNA_H-paniculata_contig17331.4077.1 vs. uniprot
Match: G4Z4N5_PHYSP (KH domain-containing protein n=15 Tax=Peronosporaceae TaxID=4777 RepID=G4Z4N5_PHYSP)

HSP 1 Score: 182 bits (461), Expect = 7.960e-56
Identity = 86/106 (81.13%), Postives = 101/106 (95.28%), Query Frame = 0
Query:    5 QDAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRHAIENATRTRIVVADQKIHILGSFSNIKVARDAICALILGAPPGKVYNQMRNVARRMNERF 110
            QDAVALLRL+DL++D+F+V DVK L GDHLSRAIGR+AGQ GKT++A+ENATRTRIV+ADQKIHILGSF+NIK+ARDAIC+LI+GAPPGKVYN+MRNVA RMNERF
Sbjct:  131 QDAVALLRLEDLFIDTFEVNDVKMLKGDHLSRAIGRVAGQDGKTKYAVENATRTRIVLADQKIHILGSFANIKLARDAICSLIMGAPPGKVYNKMRNVASRMNERF 236          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17331.4077.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LD80_ECTSI6.720e-6697.17KH domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A7S2XZF6_9STRA1.350e-6088.68Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835ZET5_9STRA9.630e-6086.79RNA-binding protein PNO1-like protein n=1 Tax=Trib... [more]
A0A7S3PRC7_9STRA4.740e-5987.62Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A2R5GT26_9STRA1.240e-5786.79Pre-rRNA-processing protein pno1 n=1 Tax=Hondaea f... [more]
A0A6T5QRH5_HETAK8.170e-5784.91Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A3M6VD79_9STRA2.790e-5682.08KH domain-containing protein n=1 Tax=Peronospora e... [more]
A0A1Z5KEX1_FISSO3.920e-5683.02RNA-binding protein PNO1 n=2 Tax=Bacillariophyta T... [more]
H3G8F2_PHYRM5.210e-5681.13KH domain-containing protein n=3 Tax=Peronosporace... [more]
G4Z4N5_PHYSP7.960e-5681.13KH domain-containing protein n=15 Tax=Peronosporac... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004087K Homology domainSMARTSM00322kh_6coord: 23..88
e-value: 4.3E-6
score: 36.2
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10coord: 14..110
e-value: 5.0E-28
score: 99.1
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 15..109
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 36..84
e-value: 4.9E-6
score: 26.3
NoneNo IPR availablePANTHERPTHR12826FAMILY NOT NAMEDcoord: 5..110
IPR039912Pre-rRNA-processing protein PNO1-likePANTHERPTHR12826:SF13RNA-BINDING PROTEIN PNO1coord: 5..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17331contigH-paniculata_contig17331:3845..5223 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17331.4077.1mRNA_H-paniculata_contig17331.4077.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17331 3756..5334 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17331.4077.1 ID=prot_H-paniculata_contig17331.4077.1|Name=mRNA_H-paniculata_contig17331.4077.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=111bp
MLREQDAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRH
AIENATRTRIVVADQKIHILGSFSNIKVARDAICALILGAPPGKVYNQMR
NVARRMNERF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004087KH_dom
IPR036612KH_dom_type_1_sf
IPR004088KH_dom_type_1
IPR039912PNO1-like