prot_H-paniculata_contig10626.405.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
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POSITION
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MSRRHRVAAVLSAVALAWCPCSVSEAFAMGGAMGSATGMGAGASPQSSFSPLRGDAEKIKEEAIILHRAGEYEAAAREFSRAAELLERATMGGESTSASSLNAVRLSLAAAQLKSGDLQGAEATCSQLLKTPGLARALRQKASYRRALARKRQAVQQGSEQLESTSGLARKAYRDAYLAVKLSQGEAGANPAEGDAQAVGLLAEMEDDTWAHGQLSDADRVAAKTKADKHLAALASISATVSPGNSSGEMFDMFAGDSGGLGSLGGAGMGGFPGLGGGSGPGLMDMLGTGAGEGGRGGVGSLMNMLMGGAGGTGGAGGRGAGAGMDKKQMLKTAKKMSKVVKKQLRNPGTQQFVCSFLKKAEPGTIKSLAEAAGVPVGDEIVSRVSTYLKKADGKMLESWIDWGEIASGVYRRVSQLSVILSRGTALAGLWLVWVWIKACFAPVVLNKAKA*50100150200250300350400450Score = Score = Score = Score = Score = Score = Score = 0.615Score = Score = Expect = 9.0E-10 / Score = 40.4Score = SequenceCoilSIGNAL_PEPTIDE_C_REGIONSIGNAL_PEPTIDE_N_REGIONTRANSMEMBRANESIGNAL_PEPTIDECYTOPLASMIC_DOMAINNON_CYTOPLASMIC_DOMAINSIGNAL_PEPTIDE_H_REGIONSignalP-noTMTMhelixTMhelixG3DSA:1.25.40.10SSF48452
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 134..154
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..40
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 426..446
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..40
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 447..451
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 41..425
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..22
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.615
NoneNo IPR availableTMHMMTMhelixcoord: 424..446
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 46..160
e-value: 9.0E-10
score: 40.4
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 54..160