mRNA_H-paniculata_contig17272.4049.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig17272.4049.1 vs. uniprot
Match: D7FYH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYH2_ECTSI) HSP 1 Score: 342 bits (877), Expect = 8.610e-111 Identity = 185/274 (67.52%), Postives = 210/274 (76.64%), Query Frame = 1
Query: 1 TQPAAIYAKYVSAQSLTLCELLEAFPSCKPPAGLVLSLLPPLPPRYYSVATSQLATPNSLAMAFSVVSYCLP---VRSSSPSPADAAXXXXXXXXXDSEGVGGVARRAGEIRRLGLCTNWLEEMLTPFLEGKGEGGCVVSVSIPVFVKSTPEFSLPASAKWPCVLIGPGTGVAPFVGFLKHREEQFAKRRQTVDAVCSGTWRGGYEIELAGEEDEAQAYRGREGRGDIWLFFGCRNKSQDWVFRREMEGFLSKGTLSQLTTAFSREGPTKIYVQ 813
T A +YA YV+AQSLTLCELLEAFPSCKP G +L+LLPPLPPRYYSVA+SQLATP+SL +AFSV S LP ++ + A XXXXXXXXX + R GLCTNWLE +L PFLEG G G SVS+PVF+K T EF LPASAKWPCVLIGPGTGV+PF+GFLKHREEQ A+RR+ DAVCSG WRGGYEI L GE+DE AYRGREGRGD+ LFFGCRN SQDW+FRREMEGFL +GTLS+L TAFSR+ K+YVQ
Sbjct: 365 TAGAGVYASYVAAQSLTLCELLEAFPSCKPRPGALLALLPPLPPRYYSVASSQLATPDSLTVAFSVASSRLPHAPATATGDAGAXXXXXXXXXXXXXXXXXXXXXXXXXVVTRRGLCTNWLEGILAPFLEGSGSGEGGKSVSVPVFLKPTKEFLLPASAKWPCVLIGPGTGVSPFIGFLKHREEQHARRREEADAVCSGYWRGGYEISLEGEDDETAAYRGREGRGDMLLFFGCRNGSQDWIFRREMEGFLERGTLSKLHTAFSRDASEKVYVQ 638
BLAST of mRNA_H-paniculata_contig17272.4049.1 vs. uniprot
Match: A0A6H5JYM1_9PHAE (FAD-binding FR-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYM1_9PHAE) HSP 1 Score: 247 bits (631), Expect = 9.130e-74 Identity = 143/230 (62.17%), Postives = 162/230 (70.43%), Query Frame = 1
Query: 1 TQPAAIYAKYVSAQSLTLCELLEAFPSCKPPAGLVLSLLPPLPPRYYSVATSQLATPNSLAMAFSVVSYCLPVRSSSPSPADAAXXXXXXXXX-------------DSEGVGGVARRAGEIRRLGLCTNWLEEMLTPFLE-----GKGEGGCVVSVSIPVFVKSTPEFSLPASAKWPCVLIGPGTGVAPFVGFLKHREEQFAKRRQTVDAVCSGTWRGGYEIELAGEEDE 636
T A +YA YV+AQSLTLCELLEAFPSCKP G +L+LLPPLPPRYYSVA+SQLATP+S+ +AFSV S LP +PA AA XXXX D G G R G + R GLCTNWLE +L PFLE G G+GG SVS+PVF+K T EF LPASAKWPCVLIGPGTGV+PF+GFLKHRE Q A+RR+ DAVCSG WRGGYEI L GE+DE
Sbjct: 457 TAGAGVYASYVAAQSLTLCELLEAFPSCKPRPGALLALLPPLPPRYYSVASSQLATPDSVTVAFSVASSRLPH-----APATAAGDPGAXXXXXXXXXXXXXXXXXDGTGXGD---RGGVVTRRGLCTNWLEGILAPFLEWRVASGSGDGG--TSVSVPVFLKPTKEFLLPASAKWPCVLIGPGTGVSPFIGFLKHREVQHARRREEADAVCSGYWRGGYEISLEGEDDE 676
BLAST of mRNA_H-paniculata_contig17272.4049.1 vs. uniprot
Match: A0A835YP71_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP71_9STRA) HSP 1 Score: 206 bits (523), Expect = 9.750e-58 Identity = 118/288 (40.97%), Postives = 160/288 (55.56%), Query Frame = 1
Query: 19 YAKYVSAQSLTLCELLEAFPSCKPPAGLVLSLLPPLPPRYYSVATSQLATPNSLAMAFSVVSYCLPVRSSSPSPADAAXXXXXXXXXDSEGVGGVARRAGEIRRLGLCTNWLEEMLTPFLEGKGEGGCVVS----------VSIPVFVKSTPEFSLPASAKWPCVLIGPGTGVAPFVGFLKHREEQFAKRRQTVDAVCSGTWRGGYEIEL--------AGEEDEAQAYRGREGRGDIWLFFGCRNKSQ---DWVFRREMEGFLSKGTLSQLTTAFSREGPT--KIYVQ 813
YA ++ Q L++ ELL FPSC PP +L+LLPPLPPRYYSVA+SQLA P+ L +AFS V Y ++G + R GLCT+WLE ++ P L + S +++P+F++ T EF LP S +WPC+L+GPGTGVAPF+GFL+HRE + + + A SG WRGG++IE A E +R E +G+ WLFFGCR+ DW++R MEGF + G LS+L AFSR+G + K YVQ
Sbjct: 421 YAAFLQEQRLSVPELLALFPSCAPPPERLLALLPPLPPRYYSVASSQLAGPDRLCLAFSAVRY--------------------------------TTKSG-VEREGLCTSWLEALVAPLLSSATTTSTLTSTPDGEAAAAALTVPIFLRPTKEFYLPGSPRWPCILVGPGTGVAPFIGFLEHREARARRDIEDSAAAASGCWRGGFDIEAIVGGGCGAAEAPGELAQWRQGERKGETWLFFGCRHAEGPGCDWIYREAMEGFKANGVLSRLECAFSRDGDSGQKQYVQ 675
BLAST of mRNA_H-paniculata_contig17272.4049.1 vs. uniprot
Match: K3X218_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X218_GLOUD) HSP 1 Score: 202 bits (514), Expect = 1.110e-56 Identity = 116/267 (43.45%), Postives = 157/267 (58.80%), Query Frame = 1
Query: 19 YAKYVSAQSLTLCELLEAFPSCKPPAGLVLSLLPPLPPRYYSVATSQLATPNSLAMAFSVVSYCLPVRSSSPSPADAAXXXXXXXXXDSEGVGGVARRAGEIRRLGLCTNWLEEMLTPFLEGKGEGGCVVS--VSIPVFVKSTPEFSLPASAKWPCVLIGPGTGVAPFVGFLKHREEQFAKRRQTVDAVCSGTWRGGYEIELAGEEDEAQAYRGREGRGDIWLFFGCRNKSQDWVFRREMEGFLSKGTLSQLTTAFSREGPTKIYVQ 813
Y ++ Q L ELL FPSC PP LSLLP + PRYYS+A+S LA P+ L +A +VV E VG A IRRLGLCTNWL+ + P L + V+S V +P+F++ T +F LPAS +WP +LIGPGTGVAPF+GFL+HR + VC+G WRGG +++L +E+ ++ E +G I+LFFG R+KS+DW+F++EME F++ GT+ QL TAFSR+ K YVQ
Sbjct: 406 YKAFIGDQHLNFVELLYLFPSCTPPLDHFLSLLPQMMPRYYSIASSPLANPDQLLVALTVV---------------------------DESVG-----ASGIRRLGLCTNWLDSISQPLLAKQ-----VMSPEVKVPIFLRPTRDFQLPASHQWPLLLIGPGTGVAPFMGFLQHRYYEVKNHLDQASDVCTGEWRGGIDLDLQEDEEYTKSPAIAESKG-IYLFFGNRHKSEDWIFQQEMEEFVANGTIRQLFTAFSRDEEEKHYVQ 634
BLAST of mRNA_H-paniculata_contig17272.4049.1 vs. uniprot
Match: A0A2D4BI60_PYTIN (FAD-binding FR-type domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BI60_PYTIN) HSP 1 Score: 198 bits (504), Expect = 4.660e-56 Identity = 115/265 (43.40%), Postives = 150/265 (56.60%), Query Frame = 1
Query: 25 KYVSAQSLTLCELLEAFPSCKPPAGLVLSLLPPLPPRYYSVATSQLATPNSLAMAFSVVSYCLPVRSSSPSPADAAXXXXXXXXXDSEGVGGVARRAGEIRRLGLCTNWLEEMLTPFLEGKGEGGCVVSVSIPVFVKSTPEFSLPASAKWPCVLIGPGTGVAPFVGFLKHREEQFAKRRQTVDAVCSGTWRGGYEIELAGEEDE--AQAYRGREGRGDIWLFFGCRNKSQDWVFRREMEGFLSKGTLSQLTTAFSREGPTKIYVQ 813
++VS Q L++ ELL FPSCKP +LSLLP L PR+YS+ATS LA + +AF+VV + D G+ RR GLCT WLE P L+ +VS+P+F++ T +F+LPAS +WP +LIGPGTGVAPF+GFL+HR+ + ++R VCSG WRG E+EL E+DE E +G +LFFGCR++ DW+F EM F GTL L TAFSRE K YVQ
Sbjct: 281 RFVSEQQLSVVELLHLFPSCKPSLDTLLSLLPQLMPRFYSIATSPLADAKKIGIAFTVVDERI----------------------DPHGI----------RRRGLCTTWLEATSQPLLQPSSAAPSSPTVSVPIFLRPTRDFTLPASHEWPLLLIGPGTGVAPFMGFLQHRQHEVSRRVAVASEVCSGCWRGEMELELT-EDDEFATPPALAVESKG-AFLFFGCRHRDHDWIFEDEMTQFARDGTLRGLFTAFSREQXEKHYVQ 511
BLAST of mRNA_H-paniculata_contig17272.4049.1 vs. uniprot
Match: A0A8K1FQ27_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FQ27_PYTOL) HSP 1 Score: 193 bits (491), Expect = 1.840e-53 Identity = 109/265 (41.13%), Postives = 149/265 (56.23%), Query Frame = 1
Query: 19 YAKYVSAQSLTLCELLEAFPSCKPPAGLVLSLLPPLPPRYYSVATSQLATPNSLAMAFSVVSYCLPVRSSSPSPADAAXXXXXXXXXDSEGVGGVARRAGEIRRLGLCTNWLEEMLTPFLEGKGEGGCVVSVSIPVFVKSTPEFSLPASAKWPCVLIGPGTGVAPFVGFLKHREEQFAKRRQTVDAVCSGTWRGGYEIELAGEEDEAQAYRGREGRGDIWLFFGCRNKSQDWVFRREMEGFLSKGTLSQLTTAFSREGPTKIYVQ 813
+ +++S Q + +LL FPSC+PP +LSLLP L PR+YS+ TS LA +L + F++V E VG A I R GLCT WLE + P L ++ IP+F++ T +F LPAS +WP +LIGPGTGVAPF+GFL+HR + A+R + +VCSG WRG ++L + + Q +LFFGCR++ QDW+F EM+ +L+KGTL QL TAFSRE K YVQ
Sbjct: 391 FKQFISDQQINFVDLLYLFPSCQPPLDHLLSLLPQLMPRFYSITTSPLADSKTLGITFTIV---------------------------DERVGPHA-----IPRRGLCTMWLESICQPLLTSAASASSE-AIRIPIFLRQTRDFLLPASHEWPLLLIGPGTGVAPFMGFLQHRYYELARRVEDASSVCSGYWRGDMALDLEEDAEFTQTPATAVESKGTFLFFGCRHRDQDWIFEDEMKDYLAKGTLRQLFTAFSREQEEKHYVQ 622
BLAST of mRNA_H-paniculata_contig17272.4049.1 vs. uniprot
Match: A0A3R7A403_9STRA (FAD-binding FR-type domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7A403_9STRA) HSP 1 Score: 176 bits (447), Expect = 1.810e-48 Identity = 106/267 (39.70%), Postives = 152/267 (56.93%), Query Frame = 1
Query: 19 YAKYVSAQSLTLCELLEAFPSCKPPAGLVLSLLPPLPPRYYSVATSQLAT-PNSLAMAFSVVSYCLPVRSSSPSPADAAXXXXXXXXXDSEGVGGVARRAGEIRRLGLCTNWLEEMLTPFLEGKGEG-GCVVSVSIPVFVKSTPEFSLPASAKWPCVLIGPGTGVAPFVGFLKHREEQFAKRRQTVDAVCSGTWRGGYEIELAGEEDEAQAYRGREGRGDIWLFFGCRNKSQDWVFRREMEGFLSKGTLSQLTTAFSREGPTKIYVQ 813
+ +V +Q L++ ++L FP+C+PP VLSLLP L PRYYS+A+S L++ P+ + +AF++V Y LPV GG R +RR GLCT+WL + P L + V+V IP+F T +F+LPA+ +P +LIGPGTGV PFVGFL+HR+ Q + + D+ GTWRG + +EL E G I LFFGCR++ QD++F+R ++ F+ +G L+ L A SRE K YVQ
Sbjct: 190 FQNFVESQHLSVVDILRLFPTCRPPLASVLSLLPTLSPRYYSLASSPLSSQPHKVHIAFTIVEYALPVVQ-----------------------GGTTSRL--LRRRGLCTSWLHALARPLLHPQTTPVNAAVAVQIPIFHHPTKDFTLPANPSYPLILIGPGTGVTPFVGFLQHRQLQ--RLKHVDDSESCGTWRGNHAVELVEHAFEL---------GQIDLFFGCRHRHQDFLFQRHLDSFIHEGVLTHLHVAASRE-QAKHYVQ 419
BLAST of mRNA_H-paniculata_contig17272.4049.1 vs. uniprot
Match: A0A3R6YY72_9STRA (FAD-binding FR-type domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6YY72_9STRA) HSP 1 Score: 171 bits (434), Expect = 2.580e-48 Identity = 104/260 (40.00%), Postives = 148/260 (56.92%), Query Frame = 1
Query: 40 QSLTLCELLEAFPSCKPPAGLVLSLLPPLPPRYYSVATSQLAT-PNSLAMAFSVVSYCLPVRSSSPSPADAAXXXXXXXXXDSEGVGGVARRAGEIRRLGLCTNWLEEMLTPFLEGKGEG-GCVVSVSIPVFVKSTPEFSLPASAKWPCVLIGPGTGVAPFVGFLKHREEQFAKRRQTVDAVCSGTWRGGYEIELAGEEDEAQAYRGREGRGDIWLFFGCRNKSQDWVFRREMEGFLSKGTLSQLTTAFSREGPTKIYVQ 813
++L + ++L FP+C+PP VLSLLP L PRYYS+A+S L++ P+ + +AF++V Y LPV GG R +RR GLCT+WL + P L + V+V IP+F T +F+LPA+ +P +LIGPGTGV PFVGFL+HR+ Q + + D+ GTWRG + +EL E G I LFFGCR++ QD++F+R ++ F+ +G L+ L A SRE K YVQ
Sbjct: 17 RTLFVVDILRLFPTCRPPLASVLSLLPTLSPRYYSLASSPLSSQPHKVHIAFTIVEYALPVVQ-----------------------GGTTSRL--LRRRGLCTSWLHALARPLLHPQTTPVNAAVAVQIPIFHHPTKDFTLPANPSYPLILIGPGTGVTPFVGFLQHRQLQ--RLKHVDDSESCGTWRGNHAVELVEHAFEL---------GQIDLFFGCRHRHQDFLFQRHLDSFIHEGVLTHLHVAASRE-QAKHYVQ 239
BLAST of mRNA_H-paniculata_contig17272.4049.1 vs. uniprot
Match: A0A024TRP9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TRP9_9STRA) HSP 1 Score: 178 bits (451), Expect = 8.340e-48 Identity = 109/270 (40.37%), Postives = 156/270 (57.78%), Query Frame = 1
Query: 19 YAKYVSAQSLTLCELLEAFPSCKPPAGLVLSLLPPLPPRYYSVATSQLATP-NSLAMAFSVVSYCLPVRSSSPSPADAAXXXXXXXXXDSEGVGGVARRAGEIRRLGLCTNWLEEMLTPFLEGKGEGGCVVSVS----IPVFVKSTPEFSLPASAKWPCVLIGPGTGVAPFVGFLKHREEQFAKRRQTVDAVCSGTWRGGYEIELAGEEDEAQAYRGREGRGDIWLFFGCRNKSQDWVFRREMEGFLSKGTLSQLTTAFSREGPTKIYVQ 813
+ ++V AQ L+L ++L FP+C PP +LSLLP L PRYYS+A+S L+ P + + +A +VV Y LPV+ SS G +RR GLCT+WLEE+ P L C V +S +P+F T +F+LPA+ +P +L+GPGTGVAPFVGF +HR+ Q + + D+ G WRG + +EL EDE G I +FFGCR++SQD++F+ E+E F++ +++L A SRE TK YVQ
Sbjct: 389 FQQFVEAQRLSLVDILHLFPTCTPPIAHILSLLPTLSPRYYSIASSPLSQPPDRVHIACTVVEYTLPVQGSS---------------------------TGYLRRRGLCTSWLEELAQPLL-----ATCAVPLSKKLTVPIFHHPTKDFTLPANPSYPLILVGPGTGVAPFVGFAQHRQLQ--RLQHADDSESCGYWRGSHAVELV--EDEFVL-------GPIDVFFGCRDRSQDFLFQPELERFVADRVITRLHVAASREQDTKHYVQ 615
BLAST of mRNA_H-paniculata_contig17272.4049.1 vs. uniprot
Match: W4GE19_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GE19_9STRA) HSP 1 Score: 179 bits (455), Expect = 1.000e-47 Identity = 105/267 (39.33%), Postives = 152/267 (56.93%), Query Frame = 1
Query: 19 YAKYVSAQSLTLCELLEAFPSCKPPAGLVLSLLPPLPPRYYSVATSQLAT-PNSLAMAFSVVSYCLPVRSSSPSPADAAXXXXXXXXXDSEGVGGVARRAGEIRRLGLCTNWLEEMLTPFLEGKGEG-GCVVSVSIPVFVKSTPEFSLPASAKWPCVLIGPGTGVAPFVGFLKHREEQFAKRRQTVDAVCSGTWRGGYEIELAGEEDEAQAYRGREGRGDIWLFFGCRNKSQDWVFRREMEGFLSKGTLSQLTTAFSREGPTKIYVQ 813
+ +V +Q L++ ++L FP+C+PP VLSLLP L PRYYS+A+S L++ P+ + +AF++V Y LPV V G + +RR GLCT+WL + P L + V+V IP+F T +F+LPA+ +P +LIGPGTGV PFVGFL+HR+ Q + + D+ GTWRG + +EL E G I LFFGCR++ QD++F+R ++ F+ +G L+ L A SRE K YVQ
Sbjct: 612 FQNFVESQRLSVVDILRLFPACRPPLASVLSLLPTLSPRYYSLASSPLSSQPHKVHIAFTIVEYDLPV------------------------VQGGTTTSRLLRRRGLCTSWLHALARPLLHPQTTPVNAAVAVQIPIFHHPTKDFTLPANPSYPLILIGPGTGVTPFVGFLQHRQLQ--RLKHVDDSESCGTWRGNHAVELVEHAFEL---------GQIDLFFGCRHRHQDFLFQRHLDSFIHEGVLTHLHVAASREQEAKHYVQ 843 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17272.4049.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig17272.4049.1 >prot_H-paniculata_contig17272.4049.1 ID=prot_H-paniculata_contig17272.4049.1|Name=mRNA_H-paniculata_contig17272.4049.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=271bp TQPAAIYAKYVSAQSLTLCELLEAFPSCKPPAGLVLSLLPPLPPRYYSVAback to top mRNA from alignment at H-paniculata_contig17272:3677..5087- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig17272.4049.1 ID=mRNA_H-paniculata_contig17272.4049.1|Name=mRNA_H-paniculata_contig17272.4049.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1411bp|location=Sequence derived from alignment at H-paniculata_contig17272:3677..5087- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig17272:3677..5087- >mRNA_H-paniculata_contig17272.4049.1 ID=mRNA_H-paniculata_contig17272.4049.1|Name=mRNA_H-paniculata_contig17272.4049.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1626bp|location=Sequence derived from alignment at H-paniculata_contig17272:3677..5087- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |