prot_H-paniculata_contig10622.404.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig10622.404.1
Unique Nameprot_H-paniculata_contig10622.404.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length169
Homology
BLAST of mRNA_H-paniculata_contig10622.404.1 vs. uniprot
Match: D8LDT3_ECTSI (ATP-binding cassette transporter, subfamily B, member 4, group TAP protein PpABCB4 MET type n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDT3_ECTSI)

HSP 1 Score: 284 bits (726), Expect = 8.910e-87
Identity = 141/168 (83.93%), Postives = 152/168 (90.48%), Query Frame = 0
Query:    1 MLGTLLSNAMLLVGGVVMCFVTSWRLSMLAFTTVGPIYHITQVYAKWSQQLNMEIYVAYAEANGHATEALGNIRTVKAMSTELQEMTKYDRATQVALGKGIKDSFGSAFTNAMSSYLDQGAGALIMWYGGSLVMDGEDRMSAGRLITYQLYWNMINNSWQNLLGIISK 168
            MLGTL SN +LL GG+VMCFVTSWRLSMLAFTTVGPIYHITQ YAKWSQQLN+EIYVAY EANGHATEAL N+RTVKAMSTE+QEM KYD ATQVAL KG+KDSFGSA TNAMSSYLD GAGALI+WYGGSL M+ + RM+AGRLITYQLYWNMINNSWQ LLG+IS 
Sbjct:  544 MLGTLFSNILLLAGGMVMCFVTSWRLSMLAFTTVGPIYHITQRYAKWSQQLNVEIYVAYGEANGHATEALSNVRTVKAMSTEVQEMAKYDTATQVALDKGVKDSFGSAGTNAMSSYLDLGAGALILWYGGSLAMEDDRRMTAGRLITYQLYWNMINNSWQALLGVISS 711          
BLAST of mRNA_H-paniculata_contig10622.404.1 vs. uniprot
Match: A0A7S1DV78_HEMAN (Hypothetical protein (Fragment) n=5 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DV78_HEMAN)

HSP 1 Score: 202 bits (515), Expect = 2.780e-58
Identity = 97/167 (58.08%), Postives = 132/167 (79.04%), Query Frame = 0
Query:    2 LGTLLSNAMLLVGGVVMCFVTSWRLSMLAFTTVGPIYHITQVYAKWSQQLNMEIYVAYAEANGHATEALGNIRTVKAMSTELQEMTKYDRATQVALGKGIKDSFGSAFTNAMSSYLDQGAGALIMWYGGSLVMDGEDRMSAGRLITYQLYWNMINNSWQNLLGIISK 168
            +G+LLSN + L+GGV +CF TSWRLSMLAFTTVGPI  ITQVYA WSQ LN +IY A A ANG ATEALGN+RT+KAMSTE  E+  Y  +T+VAL  G++D++G+A  N ++SY+D  A  L++WYGG L +  + RM+AG+LITYQLYWNM+++S+++L+ +++ 
Sbjct:  407 MGSLLSNTIRLIGGVALCFYTSWRLSMLAFTTVGPIITITQVYAAWSQGLNRQIYAALAHANGIATEALGNVRTIKAMSTEEMEVGNYRDSTRVALSTGVRDAWGTAGMNTINSYMDLAANVLVLWYGGWLAIQHDGRMTAGKLITYQLYWNMMDSSYKSLIDMVTS 573          
BLAST of mRNA_H-paniculata_contig10622.404.1 vs. uniprot
Match: A0A0M0JFP4_9EUKA (Lipid a export ATP-binding permease protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JFP4_9EUKA)

HSP 1 Score: 191 bits (485), Expect = 4.410e-54
Identity = 94/167 (56.29%), Postives = 126/167 (75.45%), Query Frame = 0
Query:    2 LGTLLSNAMLLVGGVVMCFVTSWRLSMLAFTTVGPIYHITQVYAKWSQQLNMEIYVAYAEANGHATEALGNIRTVKAMSTELQEMTKYDRATQVALGKGIKDSFGSAFTNAMSSYLDQGAGALIMWYGGSLVMDGEDRMSAGRLITYQLYWNMINNSWQNLLGIISK 168
            L TLLSN +LL GGVVMCFVTSWRLSMLAFTTV PI H+T+ YA WS ++N +IY  YA+     TEA  N+RTV+A+S+E  E+ +++   ++AL KG+KD+   AF+NA ++YLD GAG LI+WYGGS+ M+ E  ++ G LITYQLYWNM+NNS Q L  ++++
Sbjct:  498 LATLLSNLILLFGGVVMCFVTSWRLSMLAFTTVLPIMHVTESYAWWSGKINKQIYQHYADGASIVTEAFQNVRTVRAVSSEPFEIERFEVTLRLALSKGVKDAIFGAFSNAFNNYLDLGAGVLILWYGGSIAMEPEGSITVGNLITYQLYWNMLNNSLQALNNVLNE 664          
BLAST of mRNA_H-paniculata_contig10622.404.1 vs. uniprot
Match: A0A7S0EEJ0_9EUKA (Hypothetical protein (Fragment) n=2 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EEJ0_9EUKA)

HSP 1 Score: 180 bits (456), Expect = 6.130e-54
Identity = 89/169 (52.66%), Postives = 125/169 (73.96%), Query Frame = 0
Query:    2 LGTLLSNAMLLVGGVVMCFVTSWRLSMLAFTTVGPIYHITQVYAKWSQQLNMEIYVAYAEANGHATEALGNIRTVKAMSTELQEMTKYDRATQVALGKGIKDSFGSAFTNAMSSYLDQGAGALIMWYGGSLVM--DGEDRMSAGRLITYQLYWNMINNSWQNLLGIISK 168
            L + +SN +LLVGGVVMCFVTSWRLSMLA++TV PI HIT+ YAKWS  +N +I+  Y++    ATEA+ N+RTV+A+S+E +E+ KYD     AL KG++D+   A T + ++YLD GAG LI+WYGGS+ M  +G   ++ G LI YQLYWNMIN ++Q+L  ++++
Sbjct:   74 LSSTISNLILLVGGVVMCFVTSWRLSMLAYSTVLPIMHITETYAKWSGNINRQIFQHYSDGAAVATEAVTNVRTVRAVSSEAREIDKYDETMTKALRKGVRDAIVGAATVSFNNYLDLGAGVLILWYGGSIAMSPEGASVLTVGSLIKYQLYWNMINGAYQSLNNVLNQ 242          
BLAST of mRNA_H-paniculata_contig10622.404.1 vs. uniprot
Match: A0A7S0U4T8_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0U4T8_HEMAN)

HSP 1 Score: 191 bits (485), Expect = 6.670e-54
Identity = 93/167 (55.69%), Postives = 125/167 (74.85%), Query Frame = 0
Query:    2 LGTLLSNAMLLVGGVVMCFVTSWRLSMLAFTTVGPIYHITQVYAKWSQQLNMEIYVAYAEANGHATEALGNIRTVKAMSTELQEMTKYDRATQVALGKGIKDSFGSAFTNAMSSYLDQGAGALIMWYGGSLVMDGEDRMSAGRLITYQLYWNMINNSWQNLLGIISK 168
            +G LLSN + LVGGV +CF TSWRLSMLAFTTVGPI   TQ YA WSQ LN +IY A A ANG ATEAL N+R +KAMSTE  E+  +++A + AL  G++D++G A  N ++SY+D  A  L++WYGG L +  + RM+AG+LITYQLYW M+++S++ L+ I+S+
Sbjct:  276 MGQLLSNTIRLVGGVALCFYTSWRLSMLAFTTVGPILAFTQAYASWSQGLNRQIYAALAHANGLATEALCNVRAIKAMSTEDVEVASFEKAARAALTVGVRDAWGGAGMNTINSYMDLAANVLVLWYGGWLAIQHDGRMTAGKLITYQLYWTMMDSSYKQLIDILSQ 442          
BLAST of mRNA_H-paniculata_contig10622.404.1 vs. uniprot
Match: A0A7S0L5H2_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L5H2_9EUKA)

HSP 1 Score: 187 bits (476), Expect = 1.400e-53
Identity = 92/167 (55.09%), Postives = 124/167 (74.25%), Query Frame = 0
Query:    2 LGTLLSNAMLLVGGVVMCFVTSWRLSMLAFTTVGPIYHITQVYAKWSQQLNMEIYVAYAEANGHATEALGNIRTVKAMSTELQEMTKYDRATQVALGKGIKDSFGSAFTNAMSSYLDQGAGALIMWYGGSLVMDGEDRMSAGRLITYQLYWNMINNSWQNLLGIISK 168
            L TL+SN+MLL+GGV+MCFVTSWRLSM+A+TTV PI H+T+ YA WS + N +I+  YA+A+   TEA+ NIRTV+++S+E  E  K       AL KGI+D+F  AF+ A ++YLD GAG LI+WYGG++ M G+  ++ G LI YQLYWNMINNSWQ L  +++ 
Sbjct:  339 LSTLISNSMLLLGGVIMCFVTSWRLSMVAYTTVLPIMHVTEAYAIWSGKKNRQIFQHYADASAQTTEAITNIRTVRSVSSEELEQDKVGDFLSKALRKGIQDAFLGAFSAAFNNYLDLGAGVLILWYGGAIAMKGDGSITVGSLIRYQLYWNMINNSWQALNNLLNS 505          
BLAST of mRNA_H-paniculata_contig10622.404.1 vs. uniprot
Match: A0A7R9TGT2_9VIRI (Hypothetical protein (Fragment) n=2 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TGT2_9VIRI)

HSP 1 Score: 187 bits (474), Expect = 1.680e-53
Identity = 94/167 (56.29%), Postives = 127/167 (76.05%), Query Frame = 0
Query:    2 LGTLLSNAMLLVGGVVMCFVTSWRLSMLAFTTVGPIYHITQVYAKWSQQLNMEIYVAYAEANGHATEALGNIRTVKAMSTELQEMTKYDRATQVALGKGIKDSFGSAFTNAMSSYLDQGAGALIMWYGGSLVMDGEDRMSAGRLITYQLYWNMINNSWQNLLGIISK 168
            LG+ +SNA  LVGG+VMCFVTSWRLSMLAFTTV P+  +TQ YAKWSQ+LN EI+    EA+  A +ALGNIRTV+A STE  E+ KY   T+ A+ KG++D+ G A + A+++YLD GA  L++WYGG +VM G+  ++AG LITYQLYWNM+ +S+++L  +I+ 
Sbjct:   76 LGSTVSNAATLVGGLVMCFVTSWRLSMLAFTTVLPVSMVTQRYAKWSQRLNREIFSKLGEASTVANDALGNIRTVRAFSTEPAEIHKYTTKTREAMQKGVRDAVGGAGSYALNNYLDLGAMVLMLWYGGVIVMSGDGSLTAGGLITYQLYWNMLQSSFKSLQNVITS 242          
BLAST of mRNA_H-paniculata_contig10622.404.1 vs. uniprot
Match: A0A7S0YQB2_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YQB2_9CRYP)

HSP 1 Score: 191 bits (485), Expect = 2.430e-53
Identity = 93/167 (55.69%), Postives = 125/167 (74.85%), Query Frame = 0
Query:    2 LGTLLSNAMLLVGGVVMCFVTSWRLSMLAFTTVGPIYHITQVYAKWSQQLNMEIYVAYAEANGHATEALGNIRTVKAMSTELQEMTKYDRATQVALGKGIKDSFGSAFTNAMSSYLDQGAGALIMWYGGSLVMDGEDRMSAGRLITYQLYWNMINNSWQNLLGIISK 168
            +G LLSN + LVGGV +CF TSWRLSMLAFTTVGPI   TQ YA WSQ LN +IY A A ANG ATEAL N+R +KAMSTE  E+  +++A + AL  G++D++G A  N ++SY+D  A  L++WYGG L +  + RM+AG+LITYQLYW M+++S++ L+ I+S+
Sbjct:  478 MGQLLSNTIRLVGGVALCFYTSWRLSMLAFTTVGPILAFTQAYASWSQGLNRQIYAALAHANGLATEALCNVRAIKAMSTEDVEVASFEKAARAALTVGVRDAWGGAGMNTINSYMDLAANVLVLWYGGWLAIQHDGRMTAGKLITYQLYWTMMDSSYKQLIDILSQ 644          
BLAST of mRNA_H-paniculata_contig10622.404.1 vs. uniprot
Match: A0A7S3FCF0_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3FCF0_9VIRI)

HSP 1 Score: 180 bits (457), Expect = 4.130e-50
Identity = 90/167 (53.89%), Postives = 123/167 (73.65%), Query Frame = 0
Query:    2 LGTLLSNAMLLVGGVVMCFVTSWRLSMLAFTTVGPIYHITQVYAKWSQQLNMEIYVAYAEANGHATEALGNIRTVKAMSTELQEMTKYDRATQVALGKGIKDSFGSAFTNAMSSYLDQGAGALIMWYGGSLVMDGEDRMSAGRLITYQLYWNMINNSWQNLLGIISK 168
            LG+ + N  LL+GG+ MCFVTSWRLSMLAFTTV PI  +T  YAKWSQ+LN EI+    EA   A +ALGNIRTV+A STE +E+ KY   T  A+ KG++D+ G A + A++SYLD GA  L++WYGG +V+ G+  ++AG LITYQLYWNM+ +S+++L  +++ 
Sbjct:  221 LGSTVQNLALLIGGLAMCFVTSWRLSMLAFTTVLPISIVTHRYAKWSQKLNREIFSKLGEATTVANDALGNIRTVRAFSTEPRELGKYTTKTLEAMQKGVRDAVGGASSFALNSYLDLGAMVLMLWYGGHIVLSGDGTLTAGGLITYQLYWNMLQSSFKSLQNVMTS 387          
BLAST of mRNA_H-paniculata_contig10622.404.1 vs. uniprot
Match: A9RGI9_PHYPA (ATP-binding cassette transporter, subfamily B, member 4, group TAP protein PpABCB4 n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A9RGI9_PHYPA)

HSP 1 Score: 178 bits (452), Expect = 4.680e-50
Identity = 87/166 (52.41%), Postives = 123/166 (74.10%), Query Frame = 0
Query:    1 MLGTLLSNAMLLVGGVVMCFVTSWRLSMLAFTTVGPIYHITQVYAKWSQQLNMEIYVAYAEANGHATEALGNIRTVKAMSTELQEMTKYDRATQVALGKGIKDSFGSAFTNAMSSYLDQGAGALIMWYGGSLVMDGEDRMSAGRLITYQLYWNMINNSWQNLLGII 166
            ML  LL N++ L+GG  MCF+ SW+LSMLAFTT+ PI HIT VY++WS++LN + Y   AEAN  A+EA+GNIRTV+A STE  E+ ++   T  A+ KG++D+F  A   A++ +LD GA  LI+WYGG LVM+  DR+SAG+LIT+QLYWN I  ++Q+++ ++
Sbjct:  110 MLSALLRNSISLIGGFTMCFIISWKLSMLAFTTMAPIMHITAVYSRWSRELNRKRYALLAEANSAASEAIGNIRTVRAFSTEDTELDRFKSKTCAAMQKGVRDAFAYAGAVAVNDWLDLGASVLILWYGGVLVMN--DRLSAGKLITFQLYWNQIQGAYQSIMSVL 273          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10622.404.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDT3_ECTSI8.910e-8783.93ATP-binding cassette transporter, subfamily B, mem... [more]
A0A7S1DV78_HEMAN2.780e-5858.08Hypothetical protein (Fragment) n=5 Tax=Hemiselmis... [more]
A0A0M0JFP4_9EUKA4.410e-5456.29Lipid a export ATP-binding permease protein n=1 Ta... [more]
A0A7S0EEJ0_9EUKA6.130e-5452.66Hypothetical protein (Fragment) n=2 Tax=Phaeocysti... [more]
A0A7S0U4T8_HEMAN6.670e-5455.69Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S0L5H2_9EUKA1.400e-5355.09Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]
A0A7R9TGT2_9VIRI1.680e-5356.29Hypothetical protein (Fragment) n=2 Tax=Prasinoder... [more]
A0A7S0YQB2_9CRYP2.430e-5355.69Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
A0A7S3FCF0_9VIRI4.130e-5053.89Hypothetical protein (Fragment) n=1 Tax=Prasinoder... [more]
A9RGI9_PHYPA4.680e-5052.41ATP-binding cassette transporter, subfamily B, mem... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011527ABC transporter type 1, transmembrane domainPFAMPF00664ABC_membranecoord: 2..158
e-value: 1.5E-28
score: 100.3
IPR011527ABC transporter type 1, transmembrane domainPROSITEPS50929ABC_TM1Fcoord: 1..168
score: 26.026
IPR036640ABC transporter type 1, transmembrane domain superfamilyGENE3D1.20.1560.10coord: 1..168
e-value: 2.9E-33
score: 117.3
IPR036640ABC transporter type 1, transmembrane domain superfamilySUPERFAMILY90123ABC transporter transmembrane regioncoord: 2..166
NoneNo IPR availablePANTHERPTHR24222FAMILY NOT NAMEDcoord: 3..151
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..24
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 25..168
NoneNo IPR availableTMHMMTMhelixcoord: 5..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig10622contigH-paniculata_contig10622:281..6868 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig10622.404.1mRNA_H-paniculata_contig10622.404.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig10622 281..6892 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig10622.404.1 ID=prot_H-paniculata_contig10622.404.1|Name=mRNA_H-paniculata_contig10622.404.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=169bp
MLGTLLSNAMLLVGGVVMCFVTSWRLSMLAFTTVGPIYHITQVYAKWSQQ
LNMEIYVAYAEANGHATEALGNIRTVKAMSTELQEMTKYDRATQVALGKG
IKDSFGSAFTNAMSSYLDQGAGALIMWYGGSLVMDGEDRMSAGRLITYQL
YWNMINNSWQNLLGIISK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011527ABC1_TM_dom
IPR036640ABC1_TM_sf