mRNA_H-paniculata_contig17237.4031.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig17237.4031.1
Unique NamemRNA_H-paniculata_contig17237.4031.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig17237.4031.1 vs. uniprot
Match: A0A6H5KF10_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF10_9PHAE)

HSP 1 Score: 256 bits (654), Expect = 4.990e-77
Identity = 150/325 (46.15%), Postives = 212/325 (65.23%), Query Frame = 1
Query:    1 VLSAADVDALKPACVGFRALFDAVKGAGKNRDDLIGLIDYGVLIVKRIWRRLKQVFKHTSISGAIQEHVTQFDRIL--------AVLTAGAAIQSMEDARAVLDGLVTIDSLRSKLVPASPPNLPD---VPVGAVTLGKSYVTRPFLLRSAISHVTNPALANAPCVLAGMGGGGKTVVASAVVRDTKVRKHFRAGIFWLKLGQNAKEDLHALLRGLVLELAARDREFPPQLESLEDVIRHLTAVGANS-SRRLVVLDDVWEGEVVDALQHTGLQLLVTTRDRAVVSVPGESVEVGNMEENEALEVLRVGCGAFRTVELPRVEALQ 939
            VL  A V  L P C  F+AL +A +GA +++D L  L+    ++   + +  + V     +   +++ +   +R+L         +      ++ + +  A++DGL     L +      PP LPD   VP GA++L  ++V+RP +L  AI ++TN A  +APCVL GM GGGK+V+ASAVVRD KVR+HF AGIFW ++G+ +K+ LH  L GLVL +A+     PP L S+E+V  +L A  A++ S+RLVVLDDVWE EVV+ALQ T LQLLVTTRDR+VVS+PGE +EVG+MEE+EALEVLRVGCGA + +ELPR++ALQ
Sbjct:  279 VLDIASVGPLVPVCQAFKALIEAAEGAAESQDKLQRLVPRCTMLTTVLIQHHRAVGPLAQVQKPMKDFIVTTNRLLFCHRTDLSTLADFEEGLRGITNDIALVDGLEHHQLLLAMHGHLRPPTLPDMAAVPRGAISLTDAHVSRPLMLERAIDYLTNTARGDAPCVLTGMAGGGKSVLASAVVRDEKVREHFSAGIFWWRVGRISKDRLHEWLEGLVLRVASASGTTPPMLGSVEEVTFYLKAFCADAESQRLVVLDDVWEPEVVNALQVTELQLLVTTRDRSVVSMPGECIEVGDMEEDEALEVLRVGCGAPKNLELPRLQALQ 603          
BLAST of mRNA_H-paniculata_contig17237.4031.1 vs. uniprot
Match: D7G6W2_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6W2_ECTSI)

HSP 1 Score: 250 bits (638), Expect = 1.900e-71
Identity = 151/340 (44.41%), Postives = 208/340 (61.18%), Query Frame = 1
Query:    1 VLSAADVDALKPACVGFRALFDAVKGAGKNRDDLIGLIDYGVLIVKRIWRRLKQVFKHTSISGAIQEHVTQFDRILAVLTAGA-----------------------AIQSMEDARAVLDGLVTIDSLRSKLVPASPPNLP---DVPVGAVTLGKSYVTRPFLLRSAISHVTNPALANAPCVLAGMGGGGKTVVASAVVRDTKVRKHFRAGIFWLKLGQNAKEDLHALLRGLVLELAARDREFPPQLESLEDVIRHLTAVGANS-SRRLVVLDDVWEGEVVDALQHTGLQLLVTTRDRAVVSVPGESVEVGNMEENEALEVLRVGCGAFRTVELPRVEALQ 939
            VL  A V  L+P C  F+ L +A +GA +++D L GLI     +   + +  + V     +   +++ V   + + A     A                        ++++ +  A++DGL     L +      PP LP    VP G ++L   +++RP LL  AI ++TN A+ +APCVL GM G GK+V+ASAVVRD KVR+HF AG+FW++  ++AK+ LHA L G  L +A+      P L S+E+V R+L AV A+S S RLVVLDDVWE E+VDAL+ TGLQLLVTTRDR+VVS+PGE VEVG+MEE+EALEVLRVGCGA + +ELPR EALQ
Sbjct:   73 VLDIASVGPLEPVCQAFKGLIEAAEGAAESQDKLKGLISRCAFLTTVLIQHDRAVGPLAQVQKPMKDFVATTNDLAAFAATWAKGGKCRALFCHRSDRSTLTDFEEGLRTISNDIALVDGLEHHQLLLAVYRQLRPPTLPAMASVPAGPISLTDGHISRPSLLGRAIGYLTNTAVGDAPCVLTGMAGAGKSVLASAVVRDEKVREHFHAGMFWVR-ARDAKDQLHACLEGFALRVASTSGTTSPGLGSVEEVTRYLKAVCADSVSPRLVVLDDVWEREIVDALKLTGLQLLVTTRDRSVVSMPGECVEVGDMEEDEALEVLRVGCGASKNLELPRAEALQ 411          
BLAST of mRNA_H-paniculata_contig17237.4031.1 vs. uniprot
Match: A0A6H5KMV3_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMV3_9PHAE)

HSP 1 Score: 233 bits (594), Expect = 2.360e-69
Identity = 146/329 (44.38%), Postives = 201/329 (61.09%), Query Frame = 1
Query:    1 VLSAADVDALKPACVGFRALFDAVKGAGKNRDDLIGLIDYGVLIVKRIWR------------RLKQVFKHTSISGAIQEHVTQFDRILAVLTAGAAIQSMEDARAVLDGLVTIDSLRSKLVPASPPNLP---DVPVGAVTLGKSYVTRPFLLRSAISHVTNPALANAPCVLAGMGGGGKTVVASAVVRDTKVRKHFRAGIFWLKLGQNAKEDLHALLRGLVLELAARDREFPPQLESLEDVIRHLTAVGANS-SRRLVVLDDVWEGEVVDALQHTGLQLLVTTRDRAVVSVPGESVEVGNMEENEALEVLRVGCGAFRTVELPRVEALQ 939
            VL    V  L+P C  F+ L +A +GA +++D L GLI     +   + +            + + +F H S    +    T F+  L  ++   A+         +DGL     L +      PP LP    VP G ++L   +++RP LL  AI ++TN A+ +APCVL GM G GK+V+ASAVV+  KVR+HF AG++W++  ++AK+ LHA L GL L +A+      P L S+E+V R+L AV A+S S RL+VLDDVWE EVVD L+ TGLQLLVTTRDR+VVS+PGE VEVG+ME+ EALE+LRVGCGA + +ELPR E LQ
Sbjct:   78 VLDMTSVGPLEPVCQAFKGLIEAAEGAAESQDKLKGLISRCPFLTTVLIQHDRAVGPLAQGGKCRALFCHRSDLSTL----TDFEERLRTISNDIAL---------VDGLEHQQLLLAVYRQLRPPTLPAMASVPAGPISLTDGHISRPSLLGRAIGYLTNTAVGDAPCVLTGMAGAGKSVLASAVVQVEKVREHFHAGMYWVR-ARDAKDQLHACLEGLALRVASTSGTTAPGLGSVEEVTRYLKAVCADSVSPRLIVLDDVWEREVVDTLKLTGLQLLVTTRDRSVVSMPGECVEVGDMED-EALELLRVGCGASKNLELPRAEVLQ 391          
BLAST of mRNA_H-paniculata_contig17237.4031.1 vs. uniprot
Match: D7G720_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G720_ECTSI)

HSP 1 Score: 184 bits (468), Expect = 1.030e-48
Identity = 126/331 (38.07%), Postives = 177/331 (53.47%), Query Frame = 1
Query:    1 VLSAADVDALKPACVGFRALFDAVKGAGKNRDDLIGLIDYGVLIVKRIWRRLKQVFKHTSISGAIQEHVTQFDRILAVLTAGA----------------AIQSMEDAR-------AVLDGLVTIDSLRSKLVPASPPNLPD---VPVGAVTLGKSYVTRPFLLRSAISHVTNPALANAPCVLAGMGGGGKTVVASAVVRDTKVRKHFRAGIFWLKLGQNAKEDLHALLRGLVLELAARDREFP---PQ-LESLEDVIRHLTAV-GANSSRRLVVLDDVWEGEVVDALQHTGLQLLVTTRDRAVVSVPGESVEVGNMEENEALEVLRVGCGA 900
            VL  A V  L P C  F+AL +A +GA + +D L  L+     +   + +  + V     +   IQ+ V   + +       A                A+   E+         A++DGL    S  + L    PP+LPD   VP GA+ L  S       ++     +T P  + AP  + GMGGGGK+V+ASAVVR   VR+HFR GIFW+++G+ AK  L ALL+GL  ++ A   + P   P+ L+SLE V +HL AV    +S+RLVVLDDVWE EVVDA    G ++L+TTRDR+VV VP   +E+G++ E EALE+LR   GA
Sbjct:  101 VLGVASVGPLVPVCEAFKALIEAAEGAAECQDKLQSLVSQCAFLATVLIQHGRAVGPLAQVQKPIQDFVATTNELAGFAARWAKGGKCRAFFCHRPDLSALAGFEECLRRIRSDIALVDGLEHHQSFLAALPSLLPPSLPDMAAVPAGALELPSSSYVERAAVQEVADGLTAPEESRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLARDVGAAPTDAPCGVPRVLDSLEQVRQHLAAVTSTGTSQRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPAGRLELGDVTEEEALELLRKTSGA 431          
BLAST of mRNA_H-paniculata_contig17237.4031.1 vs. uniprot
Match: A0A6H5KXS7_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS7_9PHAE)

HSP 1 Score: 180 bits (456), Expect = 7.810e-48
Identity = 127/332 (38.25%), Postives = 176/332 (53.01%), Query Frame = 1
Query:    1 VLSAADVDALKPACVGFRALFDAVKGAGKNRDDLIGLIDYGVLIVKRIWRRLKQVFKHTSISGAIQEHVTQFDRILAVLTAGA----------------AIQSMEDAR-------AVLDGLVTIDSLRSKLVPASPPNLPD---VPVGAVTLG-KSYVTRPFLLRSAISHVTNPALANAPCVLAGMGGGGKTVVASAVVRDTKVRKHFRAGIFWLKLGQNAKEDLHALLRGLVLELAARDREFPPQ----LESLEDVIRHLTAVGANSS-RRLVVLDDVWEGEVVDALQHTGLQLLVTTRDRAVVSVPGESVEVGNMEENEALEVLRVGCGA 900
            VL  A V  L P C  F+AL +A +GA +++  L  L+     +   + +  + V     +   I++ V   + +       A                A+   E+         A++DGL    S  + L    PP+LPD   VP GA+ L   SYV R   ++     +T+P    AP  + GMGGGGK+V+ASAVVR   VR+HFR GIFW+++G+ AK  L ALL+GL  E+ A   + P      L+ LE V +HL AV +  +  RLVVLDDVWE EVVDA    G ++L+TTRDR+VV VP   +EVG+M E EALE+LR   GA
Sbjct:   64 VLDVASVGPLVPVCEAFKALIEAAEGAAESQHKLQSLVSQCAFLATVLIQHGRAVGPLAQVHKPIEDFVVTTNDLAGFAARWANGGKCRAFFCHRPDLSALADFEECLRRIRSDIALVDGLEHHQSFLAALPSLLPPSLPDMAAVPAGALELPCSSYVERA-AVQEVADGLTSPEDPRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAREMGAARTDAPHTVPHVLDGLEQVKQHLAAVASTGTFPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVVVPAGRLEVGDMTEEEALELLRKSSGA 394          
BLAST of mRNA_H-paniculata_contig17237.4031.1 vs. uniprot
Match: A0A6H5KK53_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK53_9PHAE)

HSP 1 Score: 174 bits (441), Expect = 1.190e-47
Identity = 127/340 (37.35%), Postives = 179/340 (52.65%), Query Frame = 1
Query:    1 VLSAADVDALKPACVGFRALFDAVKGAGKNRDDLIGLIDYGVLIVKRIWRRLKQVFKHTSISGAIQEHVTQFDRIL--AVLTAG-----AAIQSMEDAR-------------------AVLDGLVTIDSLRSKLVPASPPNLPDVPVGAVTLGKSYVTRPFLLRSAISHVTNPALANAPCVLAGMGGGGKTVVASAVVRDTKVRKHFRAGIFWLKLGQNAKEDLHALLRGLVLELAARDREFPPQLESLEDVIRHLTAVGANSSR-RLVVLDDVWEGEVVDALQHTGLQLLVTTRDRAVVSVPGESVEVGNMEENEALEVLRVGCGAFRTVELPRVEALQ 939
            +L  A V  L P C  F AL +A +GA +  ++L  L+ +   +V  +    KQV    +++  + E V     +   A + AG     A +   +DA+                   AVLD    +  +  +  P   P++ DVP  A+ L  S+V R  L    +  +T    + AP VL GMGG GK+++AS+VVR  +VRKHFRAG FWL++G   ++ L AL  GL   LA  + + P +  SLE++I+HLT + A     RLVVLDDVWE  VVD L+ TGL+LLVTTR  +VV+V G    VGNM   EA E+L+   GA   + LP  EA Q
Sbjct:   74 LLDVASVGPLTPVCQAFTALIEAAQGAMEVVENLRELVTWCAFLVGVLIEHGKQVDNLKAVNKPLNEFVATTGELAKRANVVAGRSKCMAFLCHKKDAKMMASFDDKLRRFWTDIQGLAVLDIQEIVTRMEERSRPLPLPDMADVPAAALKLPPSHVKRVGLEAEILKSLTATDASGAPYVLLGMGGAGKSLLASSVVRTEEVRKHFRAGAFWLRVGPGGEDQLQALFEGLA-RLAIPEAKLPQRFNSLEEIIQHLTVLVAEDKLPRLVVLDDVWERAVVDILRPTGLRLLVTTRLDSVVAVRGGRTVVGNMATGEARELLKSKSGA---ITLPETEADQ 409          
BLAST of mRNA_H-paniculata_contig17237.4031.1 vs. uniprot
Match: D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI)

HSP 1 Score: 180 bits (456), Expect = 3.940e-47
Identity = 122/330 (36.97%), Postives = 172/330 (52.12%), Query Frame = 1
Query:    1 VLSAADVDALKPACVGFRALFDAVKGAGKNRDDLIGLIDYGVLIVKRIWRRLKQVFKHTSISGAIQEHVTQFDRILAVLTAGA----------------AIQSMEDAR-------AVLDGLVTIDSLRSKLVPASPPNLPD---VPVGAVTLGKSYVTRPFLLRSAISHVTNPALANAPCVLAGMGGGGKTVVASAVVRDTKVRKHFRAGIFWLKLGQNAKEDLHALLRGLVLELAARDRE----FPPQLESLEDVIRHLTAVGAN-SSRRLVVLDDVWEGEVVDALQHTGLQLLVTTRDRAVVSVPGESVEVGNMEENEALEVLRVGCG 897
            VL  A V  L P C  F+AL +A +GA + +D L  L+     +   + +  + V     +   IQ+ V   + +       A                A+   E+         A++DGL    S  + L    PP+LPD   VP GA+ L  S       ++     +T P  + AP  + GMGGGGK+V+ASA VR   VR+HFR GIFW+++G+ AK  L ALL+GL  ++ A   +     P  L+ LE V +HL AV +  +S RLVVLDDVWE EVVDA    G ++L+TTRDR+VV +P   +E+G+M E EALE+LR   G
Sbjct:  118 VLGVASVGPLVPVCEAFKALIEAAEGAAECQDKLQSLVSQCAFLATVLIQHGRAVGPLAQVQKPIQDFVVTTNELAGFAARWAKGGKCRAFCCHRPDLSALAGFEECLRRIGSDIALVDGLEHHQSFLAALPSLLPPSLPDMAAVPTGALELPSSSYVERAAVQEVADGLTTPEESRAPYTVVGMGGGGKSVLASAAVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAWDVGAAPTDAPHGVPHVLDRLEQVQQHLAAVASTGTSPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGLPAGRLELGDMTEEEALELLRKTSG 447          
BLAST of mRNA_H-paniculata_contig17237.4031.1 vs. uniprot
Match: A0A6H5KU94_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU94_9PHAE)

HSP 1 Score: 169 bits (428), Expect = 2.030e-43
Identity = 102/210 (48.57%), Postives = 132/210 (62.86%), Query Frame = 1
Query:  268 DARAVLDGLVTIDSLRSKLVPASPPNLPDVPVGAVTLGKSYVTRPFLLRSAISHVTNPALANAPCVLAGMGGGGKTVVASAVVRDTKVRKHFRAGIFWLKLGQNAKEDLHALLRGLVLELAARDRE----FPPQLESLEDVIRHLTAVGAN-SSRRLVVLDDVWEGEVVDALQHTGLQLLVTTRDRAVVSVPGESVEVGNMEENEALEVL 882
            D R VLD  ++       ++P S P++  VP  AV L  S       +R     +TNP    AP  + GMGGGGK+V+ASAVVR + VR+HFR GIFWL +G+ AK+ L  LL+GL  ++ A   +     P  L+SLE V RHL AV +  +S RLVVLDDVWE EVVDAL   G ++LVTTRDR+VV VP   +E+G+M E EALE+L
Sbjct:  111 DVRRVLDA-ISAKGATGTVLPPSLPDMAKVPAEAVALSDSLYVERAAVRKVADGITNPEEPRAPYTVFGMGGGGKSVLASAVVRKSSVREHFRGGIFWLTVGRGAKKRLLPLLQGLTGDMGAAPTDTPHGVPHVLDSLEQVQRHLGAVASTGTSPRLVVLDDVWEREVVDALLPLGFKVLVTTRDRSVVGVPTRCLELGDMTEEEALELL 319          
BLAST of mRNA_H-paniculata_contig17237.4031.1 vs. uniprot
Match: D8LGG5_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGG5_ECTSI)

HSP 1 Score: 168 bits (426), Expect = 4.260e-43
Identity = 122/331 (36.86%), Postives = 171/331 (51.66%), Query Frame = 1
Query:    1 VLSAADVDALKPACVGFRALFDAVKGAGKNRDDLIGLIDYGVLIVKRIWRRLKQVFKHTSISGAIQEHVTQFDRILAVLTAGA----------------AIQSMEDAR-------AVLDGLVTIDSLRSKLVPASPPNLPD---VPVGAVTLGKSYVTRPFLLRSAISHVTNPALANAPCVLAGMGGGGKTVVASAVVRDTKVRKHFRAGIFWLKLGQNAKEDLHALLRGLVLELAARDREFP---PQ-LESLEDVIRHLTAVGANS--SRRLVVLDDVWEGEVVDALQHTGLQLLVTTRDRAVVSVPGESVEVGNMEENEALEVLRVGCG 897
            VL  A V  L P C   +AL +A +GA +  D +  L+     +   + +  + V     +   IQ+ V   + +       A                A+   E+         A++DGL       + L    PP L D   VP GA+ L + YV R   ++     +T P    AP  + G+GGGGK+V+ASAVVR   VR+HFR GI W+++G+ AK  L  LL+GL  E+     + P   PQ L+SLE V +HL AV A++  S RLVVLDDVWE EVVDAL   G ++L+TTRD +VV VP   +++G+M E EALE+LR   G
Sbjct:   76 VLDVASVGPLVPVCQALKALIEAAEGAAECEDKVQSLVSQCAFLATVLIQHGRAVGALAQVHKPIQDFVVTTNELAGFAARWAKDGKCRAFFCHRPDLSALAGFEECLRGIRSDIALVDGLEQHQLFLAALPSLRPPRLLDMAAVPAGALDLPRGYVERA-AVQEVADGLTAPEEPRAPYTVVGLGGGGKSVLASAVVRKPSVREHFRGGISWVRVGRGAKNSLLPLLQGLAREMGVAPTDAPHAVPQVLDSLEQVQQHLAAVVASTGTSPRLVVLDDVWEREVVDALVPLGFKVLLTTRDWSVVVVPARRLDLGDMTEEEALELLRKTSG 405          
BLAST of mRNA_H-paniculata_contig17237.4031.1 vs. uniprot
Match: A0A6H5LJA6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJA6_9PHAE)

HSP 1 Score: 165 bits (417), Expect = 4.400e-43
Identity = 94/181 (51.93%), Postives = 124/181 (68.51%), Query Frame = 1
Query:  355 VPVGAVTLGKSYVTRPFLLRSAISHVTNPALANAPCVLAGMGGGGKTVVASAVVRDTKVRKHFRAGIFWLKLGQNAKEDLHALLRGLVLELAARDRE----FPPQLESLEDVIRHL-TAVGANSSRRLVVLDDVWEGEVVDALQHTGLQLLVTTRDRAVVSVPGESVEVGNMEENEALEVL 882
            VP GA+TL +SYV R   ++     +  P    AP  + GMGGGGKT++ SAVVR + VR+HFR G+FW+++G++AK  L +LL+GL  E++A   +     P  LESLE V +HL T   A +S RLVVLDDVWE EVVDAL   GL++LVTTRDR+VV V G  +E+G+M E EALE+L
Sbjct:    4 VPAGALTLPQSYVERA-AVQEVADGLIKPEEPRAPYAVVGMGGGGKTMLVSAVVRKSNVREHFRGGVFWMRVGRHAKNSLLSLLQGLAREMSAAPTDTPHGVPHVLESLEQVKQHLATVASAGTSPRLVVLDDVWEREVVDALLSLGLKVLVTTRDRSVVGVSGGLLELGDMTEEEALELL 183          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17237.4031.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KF10_9PHAE4.990e-7746.15NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D7G6W2_ECTSI1.900e-7144.41NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KMV3_9PHAE2.360e-6944.38NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D7G720_ECTSI1.030e-4838.07NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KXS7_9PHAE7.810e-4838.25NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5KK53_9PHAE1.190e-4737.35NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D7G722_ECTSI3.940e-4736.97NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KU94_9PHAE2.030e-4348.57NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LGG5_ECTSI4.260e-4336.86NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5LJA6_9PHAE4.400e-4351.93NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17237contigH-paniculata_contig17237:4417..5496 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score255.8
Seed ortholog evalue2.7e-65
Seed eggNOG ortholog2880.D7G6W2
KEGG koko:K10407
KEGG Pathwayko05132,map05132
Hectar predicted targeting categoryother localisation
EggNOG free text desc.determination of stomach left/right asymmetry
EggNOG OGsCOG0457@1,KOG1840@2759,KOG4658@1,KOG4658@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko04812
Exons2
Model size939
Cds size939
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929359.6132112-CDS-H-paniculata_contig17237:4416..45531622929359.6132112-CDS-H-paniculata_contig17237:4416..4553Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17237 4417..4553 +
1691480829.748713-CDS-H-paniculata_contig17237:4416..45531691480829.748713-CDS-H-paniculata_contig17237:4416..4553Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17237 4417..4553 +
1622929359.631451-CDS-H-paniculata_contig17237:4694..54961622929359.631451-CDS-H-paniculata_contig17237:4694..5496Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17237 4695..5496 +
1691480829.7585742-CDS-H-paniculata_contig17237:4694..54961691480829.7585742-CDS-H-paniculata_contig17237:4694..5496Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17237 4695..5496 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17237.4031.1prot_H-paniculata_contig17237.4031.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig17237 4417..5496 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig17237.4031.1

>prot_H-paniculata_contig17237.4031.1 ID=prot_H-paniculata_contig17237.4031.1|Name=mRNA_H-paniculata_contig17237.4031.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=313bp
VLSAADVDALKPACVGFRALFDAVKGAGKNRDDLIGLIDYGVLIVKRIWR
RLKQVFKHTSISGAIQEHVTQFDRILAVLTAGAAIQSMEDARAVLDGLVT
IDSLRSKLVPASPPNLPDVPVGAVTLGKSYVTRPFLLRSAISHVTNPALA
NAPCVLAGMGGGGKTVVASAVVRDTKVRKHFRAGIFWLKLGQNAKEDLHA
LLRGLVLELAARDREFPPQLESLEDVIRHLTAVGANSSRRLVVLDDVWEG
EVVDALQHTGLQLLVTTRDRAVVSVPGESVEVGNMEENEALEVLRVGCGA
FRTVELPRVEALQ
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mRNA from alignment at H-paniculata_contig17237:4417..5496+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig17237.4031.1 ID=mRNA_H-paniculata_contig17237.4031.1|Name=mRNA_H-paniculata_contig17237.4031.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1080bp|location=Sequence derived from alignment at H-paniculata_contig17237:4417..5496+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTGCTTTCGGCAGCTGATGTAGACGCCCTCAAGCCCGCTTGCGTCGGTTT CAGGGCACTCTTCGACGCTGTCAAAGGGGCGGGAAAGAATAGAGACGACC TAATCGGTTTAATCGACTACGGTGTCTTGATAGTAAAGTCAATTCCACAG ACCAGCACTACAAGAATGTTTTCGCCCGCGGTGAAGCATGCTCTCACGAC TTTCGGTGAAGAAGTGGGACGCGTCATACACCTGGCTGGCAGCTTTGGTG GCGATCCTAAGCCCGTCAATCGTAAAAGGCGAATCTGGCGCCGACTGAAG CAGGTTTTCAAACATACCAGCATCAGCGGCGCCATCCAAGAGCATGTGAC ACAGTTCGACCGCATTTTGGCCGTGCTGACAGCGGGCGCAGCGATTCAGA GCATGGAAGATGCCCGTGCGGTGCTTGACGGGCTTGTGACGATTGATTCC CTCCGAAGTAAACTTGTGCCAGCAAGTCCGCCGAATCTGCCCGACGTACC TGTAGGCGCGGTCACCCTAGGTAAATCATACGTGACGCGACCTTTTTTAC TGAGGAGCGCCATCAGCCACGTCACGAATCCGGCCCTGGCCAATGCTCCC TGTGTGCTTGCCGGCATGGGCGGAGGGGGCAAGACAGTCGTGGCGTCCGC GGTTGTACGGGATACGAAGGTTCGGAAGCACTTTCGTGCGGGAATATTTT GGCTGAAGCTGGGACAAAACGCTAAGGAAGATCTTCATGCTTTGTTGCGG GGGCTGGTCTTGGAATTGGCGGCAAGGGACAGGGAATTTCCTCCCCAGCT CGAAAGCTTGGAAGACGTGATACGTCACCTAACTGCAGTTGGTGCGAATA GCTCACGGCGCTTGGTCGTGTTGGACGACGTGTGGGAGGGGGAAGTCGTG GATGCTCTACAACACACGGGGTTGCAGCTGCTGGTAACCACGCGCGACCG TGCCGTGGTATCTGTGCCAGGAGAGTCCGTTGAGGTAGGGAATATGGAGG AGAACGAGGCGCTGGAGGTTCTGAGGGTCGGCTGTGGAGCGTTTCGAACA GTTGAACTTCCGCGGGTGGAAGCATTGCAG
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Coding sequence (CDS) from alignment at H-paniculata_contig17237:4417..5496+

>mRNA_H-paniculata_contig17237.4031.1 ID=mRNA_H-paniculata_contig17237.4031.1|Name=mRNA_H-paniculata_contig17237.4031.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1878bp|location=Sequence derived from alignment at H-paniculata_contig17237:4417..5496+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTGCTTTCGGCAGCTGATGTAGACGCCCTCAAGCCCGCTTGCGTCGGTTT
CAGGGCACTCTTCGACGCTGTCAAAGGGGCGGGAAAGAATAGAGACGACC
TAATCGGTTTAATCGACTACGGTGTCTTGATAGTAAAGTGCTTTCGGCAG
CTGATGTAGACGCCCTCAAGCCCGCTTGCGTCGGTTTCAGGGCACTCTTC
GACGCTGTCAAAGGGGCGGGAAAGAATAGAGACGACCTAATCGGTTTAAT
CGACTACGGTGTCTTGATAGTAAAGCGAATCTGGCGCCGACTGAAGCAGG
TTTTCAAACATACCAGCATCAGCGGCGCCATCCAAGAGCATGTGACACAG
TTCGACCGCATTTTGGCCGTGCTGACAGCGGGCGCAGCGATTCAGAGCAT
GGAAGATGCCCGTGCGGTGCTTGACGGGCTTGTGACGATTGATTCCCTCC
GAAGTAAACTTGTGCCAGCAAGTCCGCCGAATCTGCCCGACGTACCTGTA
GGCGCGGTCACCCTAGGTAAATCATACGTGACGCGACCTTTTTTACTGAG
GAGCGCCATCAGCCACGTCACGAATCCGGCCCTGGCCAATGCTCCCTGTG
TGCTTGCCGGCATGGGCGGAGGGGGCAAGACAGTCGTGGCGTCCGCGGTT
GTACGGGATACGAAGGTTCGGAAGCACTTTCGTGCGGGAATATTTTGGCT
GAAGCTGGGACAAAACGCTAAGGAAGATCTTCATGCTTTGTTGCGGGGGC
TGGTCTTGGAATTGGCGGCAAGGGACAGGGAATTTCCTCCCCAGCTCGAA
AGCTTGGAAGACGTGATACGTCACCTAACTGCAGTTGGTGCGAATAGCTC
ACGGCGCTTGGTCGTGTTGGACGACGTGTGGGAGGGGGAAGTCGTGGATG
CTCTACAACACACGGGGTTGCAGCTGCTGGTAACCACGCGCGACCGTGCC
GTGGTATCTGTGCCAGGAGAGTCCGTTGAGGTAGGGAATATGGAGGAGAA
CGAGGCGCTGGAGGTTCTGAGGGTCGGCTGTGGAGCGTTTCGAACAGTTG
AACTTCCGCGGGTGGAAGCATTGCAGGCGAATCTGGCGCCGACTGAAGCA
GGTTTTCAAACATACCAGCATCAGCGGCGCCATCCAAGAGCATGTGACAC
AGTTCGACCGCATTTTGGCCGTGCTGACAGCGGGCGCAGCGATTCAGAGC
ATGGAAGATGCCCGTGCGGTGCTTGACGGGCTTGTGACGATTGATTCCCT
CCGAAGTAAACTTGTGCCAGCAAGTCCGCCGAATCTGCCCGACGTACCTG
TAGGCGCGGTCACCCTAGGTAAATCATACGTGACGCGACCTTTTTTACTG
AGGAGCGCCATCAGCCACGTCACGAATCCGGCCCTGGCCAATGCTCCCTG
TGTGCTTGCCGGCATGGGCGGAGGGGGCAAGACAGTCGTGGCGTCCGCGG
TTGTACGGGATACGAAGGTTCGGAAGCACTTTCGTGCGGGAATATTTTGG
CTGAAGCTGGGACAAAACGCTAAGGAAGATCTTCATGCTTTGTTGCGGGG
GCTGGTCTTGGAATTGGCGGCAAGGGACAGGGAATTTCCTCCCCAGCTCG
AAAGCTTGGAAGACGTGATACGTCACCTAACTGCAGTTGGTGCGAATAGC
TCACGGCGCTTGGTCGTGTTGGACGACGTGTGGGAGGGGGAAGTCGTGGA
TGCTCTACAACACACGGGGTTGCAGCTGCTGGTAACCACGCGCGACCGTG
CCGTGGTATCTGTGCCAGGAGAGTCCGTTGAGGTAGGGAATATGGAGGAG
AACGAGGCGCTGGAGGTTCTGAGGGTCGGCTGTGGAGCGTTTCGAACAGT
TGAACTTCCGCGGGTGGAAGCATTGCAG
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