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Homology
BLAST of mRNA_H-paniculata_contig1062.400.1 vs. uniprot
Match: D8LGP2_ECTSI (LIP1, Ras superfamily GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGP2_ECTSI) HSP 1 Score: 158 bits (399), Expect = 2.070e-41 Identity = 100/239 (41.84%), Postives = 133/239 (55.65%), Query Frame = 1
Query: 106 EPNHARVLVVGPMGAGKTSLVNSLCRYKQERQHLGPPRPTIGCNVDVKLLPGECVDRSIEFWDIGGHPDAAPARRMFVEDSSIAGVLLVFDLSNTRSARELRAWIKDLTSAGIDVGASRMPHEEREFDFMAKLLSSLKRDDAKSASSIPELMA------LLPGASDTDLEGCAGTVPVRFVGTRRDVLAPSPRGGEDVQAEFSVPRTPHIWVSAPNLNKGDEEHFHKFFEDVFRYHAAV 804
+P+HARVLVVGPM AGKT+LV+S C G PT+GC+VDVKLL G +RSIEFWD+GG PDAA AR MF E AGVLLV+D+S RS R+LR W+ +L SAGI + + + R + SL+ +S P+ + L G S T G G VP+ VG + D R G + +E V H+ V A L+ +E F +FF +VFR+H+ +
Sbjct: 10 DPHHARVLVVGPMAAGKTTLVHSFCHGGGGNGVPGNTLPTVGCSVDVKLLAGGHPNRSIEFWDVGGSPDAALARGMFFEGCEAAGVLLVYDVSIPRSLRDLRVWVAELDSAGISI-LGKSGNNGRSSATASSSGRSLR--SGRSTEYPPDFFSEGLAADLEGGGSGTAAVG-GGRVPLIVVGAKADTGEGVRREGGALASELGVG---HVAVCASKLSNEEEALFDRFFGEVFRHHSGL 241
BLAST of mRNA_H-paniculata_contig1062.400.1 vs. uniprot
Match: A0A6H5JCT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCT8_9PHAE) HSP 1 Score: 139 bits (349), Expect = 1.040e-35 Identity = 86/196 (43.88%), Postives = 106/196 (54.08%), Query Frame = 1
Query: 106 EPNHARVLVVGPMGAGKTSLVNSLCRYKQERQHLGPPRPTIGCNVDVKLLPGECVDRSIEFWDIGGHPDAAPARRMFVEDSSIAGVLLVFDLSNTRSARELRAWIKDLTSAGIDV-GASRMPHEEREFDFMAKLLSSLKRDDAKSASSIPELMALLPGASDTDLEGCAGTVPVRFVGTRRDVLAPSPRGGEDVQAE 690
+P+HAR+LVVGPM AGKT+LV+S C G PT+GC+VDVKLL G +RSIEFWD+GG PDAA AR MF E AGVLLV+D+S RS R+LR W+ +L SAGI V G S A SL+ + L A L G G +P+ VG + D GE V+ E
Sbjct: 10 DPHHARILVVGPMAAGKTTLVHSFCHGGVGNGVPGNRLPTVGCSVDVKLLAGGHPNRSIEFWDVGGRPDAALARGMFFEGCEAAGVLLVYDVSTPRSLRDLRVWVAELDSAGISVLGES---DNNGRSSATAPYARSLRSTEHPPYFFSEGLTADLEGGGSGTAAVGGGRIPLMVVGAKADT-------GEGVRRE 195
BLAST of mRNA_H-paniculata_contig1062.400.1 vs. uniprot
Match: A0A0D2VT79_CAPO3 (Uncharacterized protein n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2VT79_CAPO3) HSP 1 Score: 89.7 bits (221), Expect = 1.130e-16 Identity = 53/124 (42.74%), Postives = 75/124 (60.48%), Query Frame = 1
Query: 112 NHARVLVVGPMGAGKTSLVNSLCRYKQERQHLGPPRPTIGCNVDVKLLPGECVDRS--IEFWDIGGHPDAAPARRMFVEDSS-IAGVLLVFDLSNTRSARELRAWIKD-LTSAGIDVGASRMPH 471
+ RVLV+G G GKTSLV+ +CR + R P T+GC++DVKL EC R+ IEFWD+GG R++ + ++ IAG++LV+DLSN +S LR W+ + L A V +S PH
Sbjct: 3 DRVRVLVLGDSGVGKTSLVSLICRNEVLRS----PSWTVGCSIDVKLH--ECNGRTFCIEFWDVGGAAKYERTRQLLYDPANDIAGIVLVYDLSNNKSYTNLRRWLSEFLAGASAAVLSSPQPH 120
BLAST of mRNA_H-paniculata_contig1062.400.1 vs. uniprot
Match: A0A7S2RJ66_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RJ66_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 2.480e-15 Identity = 52/130 (40.00%), Postives = 76/130 (58.46%), Query Frame = 1
Query: 46 RTTGSSDDINMEYNAAPLLTEPNHARVLVVGPMGAGKTSLVNSLCRYKQERQHLGPPRPTIGCNVDVKLLP--GECVDRSIEFWDIGGHPDAAPARRMFVEDSSIAGVLLVFDLSNTRSARELRAWIKDL 429
R GS +A P + + + ARVLVVG G GKTSLV+ LC Y + L P T+GCNV+VK P G+ ++F D+G H + + +R +F + I GV+LV+D+SN++S L+ WI +L
Sbjct: 2 RNRGSQAQAERVSHARPAMGD-SIARVLVVGDSGVGKTSLVHKLC-YGEV---LNNPEWTVGCNVEVKYCPTDGDVPAGFVDFLDVGCHNNHSMSRSIFY--NGIDGVILVYDMSNSKSFTNLKKWIAEL 124
BLAST of mRNA_H-paniculata_contig1062.400.1 vs. uniprot
Match: A0A2D4C1B7_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C1B7_PYTIN) HSP 1 Score: 83.2 bits (204), Expect = 7.610e-15 Identity = 51/109 (46.79%), Postives = 64/109 (58.72%), Query Frame = 1
Query: 106 EPNHARVLVVGPMGAGKTSLVNSLCR-YKQERQHLGPPRPTIGCNVDVKLLPGECVDRSIEFWDIGGHPDAAPARRMFVEDSSIAGVLLVFDLSNTRSARELRAWIKDL 429
E ARVLVVG G GKT+L+ ++CR ER P R T GC+V V L D IEF D+GGHP +R MF D I G++LV DLSN+RS LR W+ ++
Sbjct: 2 ETESARVLVVGDSGVGKTTLLRAICRDAMSERDAARPHRWTTGCDVHVLLH----RDTYIEFVDVGGHPKYDISRAMFYHD--IHGLVLVHDLSNSRSHDHLRHWMTEI 104
BLAST of mRNA_H-paniculata_contig1062.400.1 vs. uniprot
Match: A0A7S2RI26_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RI26_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 1.000e-14 Identity = 52/130 (40.00%), Postives = 76/130 (58.46%), Query Frame = 1
Query: 46 RTTGSSDDINMEYNAAPLLTEPNHARVLVVGPMGAGKTSLVNSLCRYKQERQHLGPPRPTIGCNVDVKLLP--GECVDRSIEFWDIGGHPDAAPARRMFVEDSSIAGVLLVFDLSNTRSARELRAWIKDL 429
R GS +A P + + + ARVLVVG G GKTSLV+ LC Y + L P T+GCNV+VK P G+ ++F D+G H + + +R +F + I GV+LV+D+SN++S L+ WI +L
Sbjct: 2 RNRGSQAQAERVSHARPAMGD-SIARVLVVGDSGVGKTSLVHKLC-YGEV---LNNPEWTVGCNVEVKYCPTDGDVPAGFVDFLDVGCHNNHSMSRSIFY--NGIDGVILVYDMSNSKSFTNLKKWIAEL 124
BLAST of mRNA_H-paniculata_contig1062.400.1 vs. uniprot
Match: A0A024GTP2_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GTP2_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 5.800e-14 Identity = 56/163 (34.36%), Postives = 85/163 (52.15%), Query Frame = 1
Query: 121 RVLVVGPMGAGKTSLVNSLCRYKQERQHLGPPRPTIGCNVDVKLLP-----GECVDRSIEFWDIGGHPDAAPARRMFVEDSSIAGVLLVFDLSNTRSARELRAWIKDL-----TSAGIDVGASRMPH--EEREFDFMAKLLSSLKRDDAKSASSIPELMALLP 573
R+LVVG GAGKT+L+ LC ++ P T GC V + GE + IEF D+ GHP +R++F + G++LV DLSNT+S R LR W++++ T+ G+ V A+ H ++ F M KL+ + K+D + + P LP
Sbjct: 19 RILVVGDSGAGKTTLLKKLCNVSEDVM-AHPHHWTTGCEQHVLMHTHTNQRGEHFNYFIEFVDVSGHPTYKQSRKVFYH--GVHGIILVQDLSNTKSYRHLRDWLREIASEQQTNGGV-VAATYSQHANDKSLFAAMPKLILANKKDRIGAPTKRPATYNDLP 177
BLAST of mRNA_H-paniculata_contig1062.400.1 vs. uniprot
Match: UPI0008707EDC (rab-like protein 3 n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI0008707EDC) HSP 1 Score: 80.1 bits (196), Expect = 9.040e-14 Identity = 48/111 (43.24%), Postives = 69/111 (62.16%), Query Frame = 1
Query: 121 RVLVVGPMGAGKTSLVNSLCRYKQERQHLGPPRP-TIGCNVDVKL---LPGECVDRS--IEFWDIGGHPDAAPARRMFVEDSSIAGVLLVFDLSNTRSARELRAWIKDLTS 435
+VLV+G G GK++ VN +C K + RP TIGCNV+VKL PG R+ +E W+IGG+ A ARR+F + S+ GV+LV+DL+N++S L+ W+ D S
Sbjct: 20 KVLVLGDSGVGKSAAVNLICTGKPANR----ARPSTIGCNVEVKLHDYKPGTNSQRTFFVELWEIGGNAGHAQARRVFYK--SVHGVILVYDLTNSKSHDNLKMWLADAFS 124
BLAST of mRNA_H-paniculata_contig1062.400.1 vs. uniprot
Match: A0A024GT29_9STRA (PAS_3 domain-containing protein n=5 Tax=Albugo candida TaxID=65357 RepID=A0A024GT29_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 1.210e-12 Identity = 56/163 (34.36%), Postives = 85/163 (52.15%), Query Frame = 1
Query: 121 RVLVVGPMGAGKTSLVNSLCRYKQERQHLGPPRPTIGCNVDVKLLP-----GECVDRSIEFWDIGGHPDAAPARRMFVEDSSIAGVLLVFDLSNTRSARELRAWIKDL-----TSAGIDVGASRMPH--EEREFDFMAKLLSSLKRDDAKSASSIPELMALLP 573
R+LVVG GAGKT+L+ LC ++ P T GC V + GE + IEF D+ GHP +R++F + G++LV DLSNT+S R LR W++++ T+ G+ V A+ H ++ F M KL+ + K+D + + P LP
Sbjct: 447 RILVVGDSGAGKTTLLKKLCNVSEDVM-AHPHHWTTGCEQHVLMHTHTNQRGEHFNYFIEFVDVSGHPTYKQSRKVFYH--GVHGIILVQDLSNTKSYRHLRDWLREIASEQQTNGGV-VAATYSQHANDKSLFAAMPKLILANKKDRIGAPTKRPATYNDLP 605
BLAST of mRNA_H-paniculata_contig1062.400.1 vs. uniprot
Match: L1I819_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1I819_GUITC) HSP 1 Score: 77.0 bits (188), Expect = 1.350e-12 Identity = 44/118 (37.29%), Postives = 68/118 (57.63%), Query Frame = 1
Query: 121 RVLVVGPMGAGKTSLVNSLCRYKQERQHLGPPRPTIGCNVDVKL-----LPGECVDRSIEFWDIGGHPDAAPARRMFVEDSSIAGVLLVFDLSNTRSARELRAWIKDLTSAGIDVGAS 459
R+LV+G G GKTSL++ +C E + L PR T+GC V +KL LPG+ +EFWD+GG +R++F ++ + GV+LV D++N+ S R L W ++ T G +
Sbjct: 12 RLLVMGDSGVGKTSLMHLIC----EGEELRRPRSTVGCTVHMKLHESKLLPGKTA--FVEFWDLGGSARFQTSRQVFYSNA-VDGVILVHDVTNSISRRNLEKWKQEWTQHASGAGGA 122
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 88.2 |
| Seed ortholog evalue | 7.7e-15 |
| Seed eggNOG ortholog | 227086.JGI_V11_84869 |
| Preferred name | RABL3 |
| KEGG ko | ko:K07933,ko:K07976 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0003674,GO:0003824,GO:0003924,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0007275,GO:0007623,GO:0008150,GO:0009314,GO:0009416,GO:0009628,GO:0009639,GO:0009640,GO:0009791,GO:0010468,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0019222,GO:0032501,GO:0032502,GO:0032922,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0048511,GO:0048856,GO:0050789,GO:0050896,GO:0060255,GO:0065007 |
| EggNOG free text desc. | GTP binding |
| EggNOG OGs | 2CN0E@1,2QT3S@2759 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko04031 |
| Exons | 5 |
| Model size | 1053 |
| Cds size | 978 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1062.400.1 >prot_H-paniculata_contig1062.400.1 ID=prot_H-paniculata_contig1062.400.1|Name=mRNA_H-paniculata_contig1062.400.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=326bp
MEYNAAPLLTEPNHARVLVVGPMGAGKTSLVNSLCRYKQERQHLGPPRPT
IGCNVDVKLLPGECVDRSIEFWDIGGHPDAAPARRMFVEDSSIAGVLLVF
DLSNTRSARELRAWIKDLTSAGIDVGASRMPHEEREFDFMAKLLSSLKRD
DAKSASSIPELMALLPGASDTDLEGCAGTVPVRFVGTRRDVLAPSPRGGE
DVQAEFSVPRTPHIWVSAPNLNKGDEEHFHKFFEDVFRYHAAVVGSCEGS
RAGRTEAWASPASTAGSATAFTSARRAEAFDPPRLANRRSRPHHAEARVP
ESGNLETFVGGWELGTEGKSWGGGW* back to topmRNA from alignment at H-paniculata_contig1062:17812..26854- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1062.400.1 ID=mRNA_H-paniculata_contig1062.400.1|Name=mRNA_H-paniculata_contig1062.400.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9043bp|location=Sequence derived from alignment at H-paniculata_contig1062:17812..26854- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAAGGTTCGGTTCTAACATGTGCGTGGAGGGAGAGACATCATTGAAGGAC
AACTGGCAGCAGTGACGACATCAACATGGAGTACAATGCAGCACCTCTGT
TGACAGAACCGAATCATGCGAGGGTTTTGGTGGTGGGTCCTATGGGGGCA
GGAAAAACGAGCCTGGTTAACTCATTATGCCGATATAAGCAGGAACGGCA
ACATCTCGGGCCGCCACGCCCCACCATTGGGTGCAATGTTGATGTGAAGG
TGACTGCAGTAAAACCTCTGCCTATCTCAGTATTGCGACACATTCTATTA
AGCGATTGTTCTAATGGAGACTGATTGGCATATCCTCTGTCATGGGTCAG
ATTACTCTGCAGCAGCAATATGACGCGCGTCATGCGTCCCAAACGACTAC
CTGGTGACCGTGTGTAAAGTGACCGTTCATGGCCTTGTCAGCGAATAAAT
AAGTGTTCAGGCCATCCCTTATGGGGATGCAAAAATGTACAAAAATTGGT
AAAAAAAAAAATCCAATTCAAAATCCAATTCTTGTGAGACGTTCTTCATG
CGATTTTTTAGAAAAAAATTCCAAGTCAGGTTTGGCGCGATTGGAAAGTT
TGCAACTGTAGAGTATGACTTCATTCACGGGTGGCGTCGTGCGAGCAGTA
CAATACAGACAGTCAATAGTACGATCGTGTCTGTAGTAAAATCTTTTTAG
GCTGCATACTGCATATCCCACCCAATTTTAAACCATGGACCATCGCATTA
CGATCTACTTCTTGCAGTCACAACCGTCTTCCCAAGTTTGGAACGCGTCA
ACAAAAATCCGTATGTCCCGTAAGATGTGCCGATGCGATTTTTAAATTGG
ATATTTCTCACTTGGATTTTTGCAAAAGTCAACTTTTCAATTTCAATTTT
TCAATCCCCGTAAGAATTGGTCTTACCCAAGACAAAAAATGTTAGTTCGA
GATAGTTGCGAATGCTCTATTCGTATGTTGATATTTCTTTGACTCTGTGA
CACGGCTCCTTCCTCAGACGAGACGTGACCGTCTTTGGCGTGTCCTGGGA
AATAGTTTTACTCAAAAATTTCCTTTACGTTTCCTTCCTTTTATTATCCT
GCCTCAAATAAACGTAAACCCGATTCCAACTGGTATCCAGTACAGCACCG
GTGATCCTATCGCGGTCAGTTCTTCTCACACGGGACTCAACTCTGCGGAC
ACCTAGATGCACTTCATAGGCTGGGATCTCAGGCTTATTGGCGTCTTGGG
TGGGAGCTAACAGGAGTGAGTGGTAGTGGGTGGTGCTACTTGTGTGCACT
CCCTGTTCTCGTCAGGGTATCACCTTAGTTCTCTATGTCCCGCGTAACGT
CCCACGATACCCCGATTACTATACTCCACTTCTCGAACTAGTGTTAACCA
CCCCGATGTGTCACATGCATCATTCCTAGATCCTTCTCTGTTATCAGTCA
ATTTGACCAACATCCTGGCTGCTTCTCAGTCAACAAGAATATGATCCGAA
TATTATTTTACACTGAATCGCCAGTATTGGACATCTGCGATACTGTCTAT
GATACTGTCATCAATATGCTCCTTGCTGTTTTCTCATGACTACCTTATTC
GGTAGAATATCTTATCTCAACATCGTATTTGCAAATGGATTTCACGCTAA
AGTGAAAGTATTCGCCTGACTTTCAGATGAACTCTAGTATTCTATGTACC
TCGGACCATCCACGATTGCTAATAATACTCGTAAATCGAATAGACAGGGG
TGGCTACTCTATTTTATGTGTCCGCTCATCCTAAAACTCAGGCGAGTACG
TACTTTCGGTGTTTTTTCAAACCTTTCATAATGAGTAATCGTTTTTGTCT
GGGGTGAAAGCTCCAGTATAGTACTGCAGCACTAAATTCTCGGGGGTACA
TCCCCAAATTTGTCCCCGACTTGGAGGTTTCGGGTGCATCAACCTGCACA
TTCACTCGGCGTGATAAACTGTCAATCTGACGATAGGGCGTTGAACCTAC
TTTAGGATAGAGAAGTGGGTTCGTCAGTTTTCCAGGGATACGATGAACTT
TGATATACATGCTGTGTGTATGGAGATTGAGACCTGGTCATCAATCGGTC
GAAAAGAATAGATGACAGTTCTTTCGTTCTATGCTTTACGATCTGCGGTG
CCCCGATGCAAGTAGAACCAACGCCGGAAGTAAGCGTAACCTAAACCCGA
ACCCCCACACCCCTAGGCGCAGTGTGCGTTGGAAGAGCTCGAAGCGGCGC
CAACGGCGCCGATTTGAGTTGAGAAAGCGTGCTGCGCACGCGCCAGGACG
TCTCATAACGGTGACGTTGTGATGATCGTTGCGTGGGATATTATGCTGAG
TTTGTCTCCGTCAAACATGATTTCGAGCAACTGGTAACGACTACTGAAGG
AACATGTAGATTTAAACCACTTCGCAACTTCAGTTCTTCGGTGTGTTTAG
TTCTAAAACAAATATAGTGGCGGTTGACCGCACATTGCGGCTGTTGTCAT
ACTCTATCCGGTATCCTTGACACCGCATTTTTCAGTCTGCATGAATGCTC
GTCCGTTTGACCGTAGGGCGTTGATCTAGTACCGATTGGACAGGTGGTGT
TAGCTTTCCAGGGATACAACGAGCTCTGGTGTATATGCCATGTGTGTGGA
GAAATTGATGATGCCACAAACAGACATACTAATTTGTCCTGACAGCACTG
GCTACACCGTGTCCCCTGATAAAGGTCGTTCAGCGTACGTAGATCTGGGA
CTACACCCGCGCCAGGCGCGTCTGGAGAAGAGGCTTGCTATAGTAGAACA
TACGGTTTTTTTCTAATAGTGTAGCTGTTGAAATGTTGAAAACAGTGAGC
GAAAAGCATGAGAGCCACACAGAGAGAAACGGACAGATGATGATATTTTG
GATCTCCCTCAGTACGCTTTGTATTATTCATGAGTCTTTGATTTCGTCAT
GATCCGGCAGGAAAGGTGAAACGCTCATCCGTATTTTTATATACAGAATA
GCTCTGTCTGTAAAACTTGGAATGTTGCTGTAATCCTCCACCTTCCCAGT
CTTCCTCCATTGGTGGGCTGAGTACCTGAGAACTTTGGCAAACTCTACGT
CCGGCCTTTGTCTGTGGATGGCGTCTTTTGTGTCTGTCTTCATTCGAGTG
TCGCTGGCAGCTATTGCCAGGAGAATGCGTAGACCGGTCGATTGAATTCT
GGGACATCGGCGGCCATCCGGATGCTGCGCCTGCCCGCCGAATGTTCGTG
GAAGATTCTTCTATTGCGGGCGTGCTTCTTGTGTTCGACTTGTCAAACAC
CAGGTCTGCCTTTCGCATCGTTGTGTAAAAACAATGTTACGATGTGTCAG
TTTCCTACGAAACCAGTAGACTTATGACGCTGCCGTCGTGCATCATTTGT
AGCCAGCATACTTGTATATTAAAAACACAACACAATTGATACTTGAGCAA
CAGTTAGCGTCTGTGTCTTCAGTGCAACACTGCAAGCTATCCCCGCAGTA
TCGCTTCTCGGCCTTGCGGTCGTTCAATTTTGTCGATATCTGGCGTTATT
CCTGCCTTGGTTCTACTGGTTTTGCCGCGCGTCGTTGTATAGCTCTATTT
TGCCGGGAAAACGCGACGTGTAATAACACAAATGGGATATTTCAGAGTCA
CCTTGCCATGCAATAGCACGAGTCACATGCTACATTTTGCTCAGGTATAT
ATACTATCTGTAGTTCAGTTATGGGTTGTATCCATAGCGATATATACGAC
GTGCATTCACCCCTGGGTCTTCACTAGCAAAATTAATTATTGGTGGGTGA
ATCGCTGAGGACTAATAATGGCAACACCGGCAACCCGGGCGAAAACACGT
GGGCACAAAAAGGGCAGGTAGGAACACGGAATCGTCAATCAGCTTGGTTC
GTTTTGTTTACCTTCAGTAACAGATTGTCCTCTTTTTGAAAATCAAGTTG
GGGGGGGTGCTCGGGGTGGTCAGTCAACGTTCCCCGAGAAGGATATACTA
ACTATGCACTGGAGAAAGTCTACTTTCTGTTCAGAGGATACCGCTGATAT
GTGGTGGGGAGTGTATAGTCACGATGCCCCTTTGAAAGATGAGGATGCAC
TGACTGCGCGCGGGTAGGTTAGAATAGATTTAAGCCTGAACTCAATATTT
CCTTTAGCATCCACTAGGTTCCGTGGAGTAGAAATAGAAGGAAGCCAGTG
CCTAATGCCGTTGCAACGCAAAACAGGTCGACTGAACCAACGTACCATCT
ACCCGCAGAACAATGCCTTTTGTACTATCCTATAGTATGTTTATGTTGAG
TGTTGTTGTATACAATGTCGGTATTATAGCACTACTGTAACGGACGTTAG
CGTCGTTGATCAACGAATCCTCTCGTTGTTTTTGTGTAGAACTCTTTTTC
TCCTTCCCCCCCCTCTCTCTCTACACGCCATAATGTGAAGCCGACTCTGT
TTTCTAGTACTGTAGCGCTCTTTGCTATCACACCCCCCTGATATCGTTTT
TCCAATTCGATTTTCTCGAGAGTAGGAGTCTCTGCACTGCCGAAACGCGA
CGTGTAATAACACGTTTCCAACGGTACCGTTTTCGGTGTCATGAGCCTAC
TTGAAGATTCAATCTGTCCCGAAAATCCAGATCCACCCTGTCACTCTGCG
TCGATTTGCTAAAAGAGTGTATGATTAGAGCAAGAGAGGAGATGAGTTAC
ATACAGCGTTGGCAAATAACTATTTAATTCAATTCATAGTCGCTCCTCTC
GAGAAGATACCATCACAGACCAGGAGAGCGAAGAACCTAGAGTACAAGGA
AGTGACCTAGTGGGCACAACAAACAGCGTTACCTCTACAACCGAATAAAC
CATTTAAACTCGTATCGCGCGGAAAGTACAAATCAGTGCCCGTATATAAC
CTGCGGGGGAACGTTAAATGCCCTAGGCTTGTTAAATCCTCATATGCCGA
ATATTTACTGATGATAATCTTCGTTTTTACTTATTTGAGCAACAGATACG
GTCGAAAAGCTCGCATTTACGGGATAACCATTGAAACATGCGAGCATGAT
ACGTAAGACAATAGATACGGGATACATGAACGTTCGGTGTACAATCCCCT
GTGTGCATAGTGTACTCGTGTTTGGAATGTAGCCTGTAGTACACAACGTA
GCTTTCCCCGTTGTGCGAACGTGGAGTACACTTGCTGATGCAGCTGTACA
TGGACGAGTGCTTGGTCCCCCAATCACCACTCCTACGACTCATCCACAAC
AAACCAAACATATATTCAAACGTCCAAGTGACTTTTGGAATGGACTTGAA
GGATGTTTCGGTATACGTTTTCGTAGATGAACAAGACGCCGATCACATGA
CACGTCCCGCCCTAACCATGACCAAGTACCAAGACTTCTCGCACCTCTTC
GAACAAGCACACCCATAGTGGGATACTTCCAACACTTTCACAAGCGAGTA
TCACTCTAGCACTCGCGTGTCAACTGTGTGCAGACATACCATGATTTGCA
TATGAACGCCTGGCAAAAACAGAAATACCACGTTCACTTACCAAGCGTCA
TTTATAAGTGAAGCCACTTGCCATAGTTCGTAGCTCCATAAAGCTAGTAT
ACTAAAAAACTCGTTGTACTGTACCCTGTTAAAGATATGCAACTAGCCTC
AATAATCAGCTGTATATAATGTGCAGCAAAATTAGATCAAGGGCAGGGGG
TATACCCTTCGTCGCCAAGTGTCCAGGGGAGCGATAATGTTTGCGAGTTT
TTGGCTGCTGGGGCTCTTTGCTGTAGGGGGGTTGGTAGGGAGTACGATGG
ATCAATTTGGGTGGTAAGCAAGCTACTATCCGTATAGAAATTACTGGGCC
GTTGTTAACGGACATCACTCGACGACAACGAGAACATTGCTGGAGAGGTC
GAACGAGGCGAGCGCGAGATACTCTCCAACAGCTGCGCGTTTTTGCCGCT
GGACCCTGACTAACCATCGATGCTACAGGCCACATGATGTTGAATCCCCA
ACGTGTTTTTTGGCTCTAGCAACGCCGGTTTGTTTTCAAATCCCAGGAGC
CTACTATTGCACTGCCACAGTGAGCATGCGCGGGCAAAATTCCGCGGTAT
TGCATGCAAGGTGACGGGACAATGCTACTGAAACTCCCATCGTAAATGTT
GAAGAAATAAAAAAATGGACAGCACTTTGTAGAGTTTTTGCAGCTTTTGA
GGTGGCATTTTCTGAAATCCCGTCTCCTGGCAAGGAGGGAGTGGGGGAAG
GGGGGATTTCCAGTCCACGGATTCCCTTGCTACAGCGTCTATATTTCCGG
TCATTCCCTGACACGCTACTACGAGATAGAAGTCGTCTCCGAGTGGATAT
CGATCGACATCCTTCTTGTACGCTTCGCGCCGATACTTCAACGCAGGTCC
GCCCGGGAGCTTCGGGCTTGGATTAAAGACCTCACATCCGCAGGTATCGA
TGTTGGCGCAAGTCGCATGCCCCATGAAGAGAGGGAATTCGATTTTATGG
CCAAATTACTCTCGTCCTTGAAGCGAGACGATGCGAAGTCAGCGAGTTCA
ATTCCGGAGCTGATGGCGTTGTTGCCAGGGGCTAGTGATACGGATCTTGA
AGGCTGTGCGGGGACTGTGCCAGTAAGGTTCGTGGGGACTAGGAGGGACG
TTTTGGCGCCGTCGCCTCGCGGTGGAGAGGATGTCCAAGCAGAATTTTCT
GTGCCAAGAACTCCGCATATTTGGGTGGTGAGTCTTGTCTCTGTCTGGAC
GGTGCCGTGTTCGGTGTCGTTTAACTATGCACGTGACGCACGAAGGAAGG
GCCCTGTAGTGTCATGTTTTTTTCCCCTGTGAGCAGACAAGCTTTCACAT
TAACAGCAAGAAGCATAAGATGCCTTCACCAAACCTTTTGATTGGTCCAT
GGTTTCTACGTGTTACAGTACCGTGAGAAACGACAAGAACAGTTAGGTCT
TATGTAGGTTGCGCATTAACGAGATGAACAACTAGCTCTACGCGGGCTAT
TTTTGTCGGCGTCTCTGGCTGGCGCCAAGAAATAATTGGAATGATGGAAA
ATGTAGAATAATCAGTTCCCCTGTACTGGTCCATTTAAATACAAAAAAGT
AGCCCGTCAGCGATTTTCTTGTGTCATTAATGTGCACATAGTTATAATAA
TTCTCATCGTATCTCGTAACAATCACGGGAAAACAAAAAATCAGATCAAA
GTTGGCTCGATATACGATAATTAGATATTCGTTTTTTGGGCGCAACTTTA
GGATAGCGACGAGCTCTGCGATGAAATCAACCAAAATTCGGACCCTCACG
GCAGAAACCGTGTATTCCGATTATCTCAACATTACAGGGTAAAAGACGAA
AAGTGCAGGCAGGGAGCTATTGTTATCGTTCGTGGGCAAATTATCGTCAT
CATTGTGTTCTCTTTTTAAAATTTATTTCAAATCTCGTAAAATCGAGAGG
GGAAAGCTTGGTAAACGATTCGTGTGCTCTTCGGTGCGACCAACCTATGA
TAACAAAGTGTTTTGCCCTCATCACGCTTTACGCTCGATTGTTATCGTCG
ACTCGCTGCTGAGATATGTTAGCGTGCGTGTTTGTAGCCATCTGCAATAA
GTGAGCATTAAGAATTTCACTATCAGCATGCAATCTTTGTTTTTTTCAAT
CTAACACCCATTAATGTCAAAGGCTTGGGTTGGGTGTGCATATTCGTTGT
GTACGGTGGTCCCCGGTAAGGCCTTGTTTCAGTGCTTTTCATGTGTAACG
TATCAACGAGAGTCACCCGGCTAAAACAATAGGCAGCCTCAGTGTCAACC
TGGCCACGTACAACCAGCTCGGGAGTGTAGATTGCCTGGCAGATTTTCGC
ACCGATAAAATTCACCTGGAAGGTAGGACTCACCATTGTGGCGTGATGCT
TTTGTGACCCGTAACACGCACGCCCAGTCTGCGCCAAACCTGAACAAGGG
GGACGAGGAGCATTTCCACAAGTTTTTCGAGGACGTTTTTCGATATCATG
CGGCCGTGGTGGGGTCATGTGAAGGTGGGCGATCACCGATAACGGTAAGT
TCTCTCCATGCTCGGTGTATATTGAGCTTGTTTGGCATGGTGCCAAATAC
ATCCCAGTAGCAGAACGGCCCTCTCCTCTTTTCGTTCTATTCTGTCGGAA
CAACGGCTTTTTCTGCCGCATATGTTAAGCGCACAAGTCAGTATGTTATT
GCGTACCTAGCCGTGTCCCCCTCGCTGTCGTTCGGCGCGCTATGTACCCG
TATTTCCTGGCCGCCCTTGGGTCATATCCTTTCCACGAATTATCAGATGG
TTGCGGTAATGTTCTAATTTACGCTGTGCACCGGATCATCGCCGATTCGT
TTGTTTTGCCGGCGCAAGGTTGTACGTATGTGTTACTCAATCTAATAGGA
CCAATTGTTGGAAAGCTGCAAGGTGCCCCCGCTTTATTGTCACGTTACGT
GTAACTCGGATAAAGGCGTGTGTACTTTCGGCAACGACTGATTGCTATGA
ACGAAGTCTTGGCTGTTGCATGGCATATGTACTGGATATCGACATATATG
TTATATTCCTCAAACTGTGAAGAGTTGTTTTTCTCAACATTGCGTACATT
CGCCGCTTTTAATAACTCAAATTTAAGTTCCAGGCAACCACACGTGTGCA
GTTAAGCCGTTTGGAGAATGTATCCCCTTCGAGAACTTACCGATGGGATT
TACATGGCCGAGGGGTGTAGTGCTTACGTACCCAGTTCATTCTAAAGGTG
AACCATGGTGATTGCCACCACCACCACCATCCCCACCCCCATTACCACCT
CTTACTGCAGGCTCGAGAGCGGGGAGAACTGAGGCATGGGCTTCACCGGC
CAGTACAGCAGGCTCAGCAACAGCGTTTACTTCGGCACGGAGAGCAGAGG
CATTTGACCCTCCACGACTAGCGAACCGGCGCTCACGCCCCCATCATGCA
GAGGCGCGAGTTCCAGAAAGTGGAAATTTGGAGACGTTTGTTGGGGGGTG
GGAACTCGGGACTGAGGGTAAAAGTTGGGGGGGGGGTTGGTAG back to topCoding sequence (CDS) from alignment at H-paniculata_contig1062:17812..26854- >mRNA_H-paniculata_contig1062.400.1 ID=mRNA_H-paniculata_contig1062.400.1|Name=mRNA_H-paniculata_contig1062.400.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1956bp|location=Sequence derived from alignment at H-paniculata_contig1062:17812..26854- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAGTACAATGCAGCACCTCTGTTGACAGAACCGAATCATGCGAGGGT
TTTGGTGGTGGGTCCTATGGGGGCAGGAAAAACGAGCCTGGTTAACTCAT
TATGCCGATATAAGCAGGAACGGCAACATCTCGGGCCGCCACGCCCCACC
ATTGGGTGCAATGTTGATGTGAAGATGGAGTACAATGCAGCACCTCTGTT
GACAGAACCGAATCATGCGAGGGTTTTGGTGGTGGGTCCTATGGGGGCAG
GAAAAACGAGCCTGGTTAACTCATTATGCCGATATAAGCAGGAACGGCAA
CATCTCGGGCCGCCACGCCCCACCATTGGGTGCAATGTTGATGTGAAGCT
ATTGCCAGGAGAATGCGTAGACCGGTCGATTGAATTCTGGGACATCGGCG
GCCATCCGGATGCTGCGCCTGCCCGCCGAATGTTCGTGGAAGATTCTTCT
ATTGCGGGCGTGCTTCTTGTGTTCGACTTGTCAAACACCAGCTATTGCCA
GGAGAATGCGTAGACCGGTCGATTGAATTCTGGGACATCGGCGGCCATCC
GGATGCTGCGCCTGCCCGCCGAATGTTCGTGGAAGATTCTTCTATTGCGG
GCGTGCTTCTTGTGTTCGACTTGTCAAACACCAGGTCCGCCCGGGAGCTT
CGGGCTTGGATTAAAGACCTCACATCCGCAGGTATCGATGTTGGCGCAAG
TCGCATGCCCCATGAAGAGAGGGAATTCGATTTTATGGCCAAATTACTCT
CGTCCTTGAAGCGAGACGATGCGAAGTCAGCGAGTTCAATTCCGGAGCTG
ATGGCGTTGTTGCCAGGGGCTAGTGATACGGATCTTGAAGGCTGTGCGGG
GACTGTGCCAGTAAGGTTCGTGGGGACTAGGAGGGACGTTTTGGCGCCGT
CGCCTCGCGGTGGAGAGGATGTCCAAGCAGAATTTTCTGTGCCAAGAACT
CCGCATATTTGGGTGGTCCGCCCGGGAGCTTCGGGCTTGGATTAAAGACC
TCACATCCGCAGGTATCGATGTTGGCGCAAGTCGCATGCCCCATGAAGAG
AGGGAATTCGATTTTATGGCCAAATTACTCTCGTCCTTGAAGCGAGACGA
TGCGAAGTCAGCGAGTTCAATTCCGGAGCTGATGGCGTTGTTGCCAGGGG
CTAGTGATACGGATCTTGAAGGCTGTGCGGGGACTGTGCCAGTAAGGTTC
GTGGGGACTAGGAGGGACGTTTTGGCGCCGTCGCCTCGCGGTGGAGAGGA
TGTCCAAGCAGAATTTTCTGTGCCAAGAACTCCGCATATTTGGGTGTCTG
CGCCAAACCTGAACAAGGGGGACGAGGAGCATTTCCACAAGTTTTTCGAG
GACGTTTTTCGATATCATGCGGCCGTGGTGGGGTCATGTGAAGTCTGCGC
CAAACCTGAACAAGGGGGACGAGGAGCATTTCCACAAGTTTTTCGAGGAC
GTTTTTCGATATCATGCGGCCGTGGTGGGGTCATGTGAAGGCTCGAGAGC
GGGGAGAACTGAGGCATGGGCTTCACCGGCCAGTACAGCAGGCTCAGCAA
CAGCGTTTACTTCGGCACGGAGAGCAGAGGCATTTGACCCTCCACGACTA
GCGAACCGGCGCTCACGCCCCCATCATGCAGAGGCGCGAGTTCCAGAAAG
TGGAAATTTGGAGACGTTTGTTGGGGGGTGGGAACTCGGGACTGAGGGTA
AAAGTTGGGGGGGGGGTTGGTAGGCTCGAGAGCGGGGAGAACTGAGGCAT
GGGCTTCACCGGCCAGTACAGCAGGCTCAGCAACAGCGTTTACTTCGGCA
CGGAGAGCAGAGGCATTTGACCCTCCACGACTAGCGAACCGGCGCTCACG
CCCCCATCATGCAGAGGCGCGAGTTCCAGAAAGTGGAAATTTGGAGACGT
TTGTTGGGGGGTGGGAACTCGGGACTGAGGGTAAAAGTTGGGGGGGGGGT
TGGTAG back to top
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