mRNA_H-paniculata_contig17097.3964.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig17097.3964.1 vs. uniprot
Match: A0A6H5K2M1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M1_9PHAE) HSP 1 Score: 79.3 bits (194), Expect = 2.540e-12 Identity = 45/114 (39.47%), Postives = 60/114 (52.63%), Query Frame = 3
Query: 909 AARKVGNLVHKAKITTLLSLLDSLPPAGRPPGPDDPLGGVEQADAAKSRFRGMSGTEALTVERAQPSDNARTVPPAEYVLMERRFLGIEPYLAARCPCCG----AEDVTTRHAR 1238
A K+G ++K ++ + L+ LP PP D P GG E + A +R R G T RA P+D AR +P E+V RR LG+E +LA RCP C E +TT HAR
Sbjct: 389 AQHKLGKAINKIQLEKFMESLEHLPQEAVPPTRDSPYGGQEARNMAYARTRCSQGQRGRTFLRAAPTDRAREIPSNEFVYATRRALGVEEFLAERCPRCHRGREGEIITTVHAR 502
BLAST of mRNA_H-paniculata_contig17097.3964.1 vs. uniprot
Match: A0A6H5JTC7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTC7_9PHAE) HSP 1 Score: 79.0 bits (193), Expect = 4.770e-12 Identity = 46/114 (40.35%), Postives = 60/114 (52.63%), Query Frame = 3
Query: 909 AARKVGNLVHKAKITTLLSLLDSLPPAGRPPGPDDPLGGVEQADAAKSRFRGMSGTEALTVERAQPSDNARTVPPAEYVLMERRFLGIEPYLAARCPCCG----AEDVTTRHAR 1238
A K+G V+K ++ L+ L LP PP D+P GG E + A +R R G RA P+D AR +P E+V RR LG+E +LA RCP C E +TT HAR
Sbjct: 537 AQHKLGKAVNKIQLEKLIESLGHLPQEAVPPTSDNPYGGQEARNMAYARTRSSQGQGGHAFLRAAPTDRAREIPSNEFVYATRRALGVEEFLAERCPRCHRGREGEIITTVHAR 650
BLAST of mRNA_H-paniculata_contig17097.3964.1 vs. uniprot
Match: A0A6H5KMQ2_9PHAE (Reverse transcriptase domain-containing protein n=16 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ2_9PHAE) HSP 1 Score: 78.2 bits (191), Expect = 9.930e-12 Identity = 45/114 (39.47%), Postives = 60/114 (52.63%), Query Frame = 3
Query: 909 AARKVGNLVHKAKITTLLSLLDSLPPAGRPPGPDDPLGGVEQADAAKSRFRGMSGTEALTVERAQPSDNARTVPPAEYVLMERRFLGIEPYLAARCPCCG----AEDVTTRHAR 1238
A K+G ++K ++ + L+ LP PP D+P GG E + A +R R G RA P+D AR +P E+V RR LGIE +LA RCP C E +TT HAR
Sbjct: 906 AQHKLGKAINKIQLEKFMESLEHLPQEAVPPTRDNPYGGQEARNMAYARTRSSQGQGGHAFLRAAPTDRAREIPSNEFVYATRRALGIEEFLAERCPRCHRGREGEIITTVHAR 1019
BLAST of mRNA_H-paniculata_contig17097.3964.1 vs. uniprot
Match: A0A6H5KUZ8_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUZ8_9PHAE) HSP 1 Score: 77.8 bits (190), Expect = 1.040e-11 Identity = 44/114 (38.60%), Postives = 60/114 (52.63%), Query Frame = 3
Query: 909 AARKVGNLVHKAKITTLLSLLDSLPPAGRPPGPDDPLGGVEQADAAKSRFRGMSGTEALTVERAQPSDNARTVPPAEYVLMERRFLGIEPYLAARCPCCG----AEDVTTRHAR 1238
A K+G ++K ++ + L+ LP PP D+P GG E + A +R R G RA P+D AR +P E+V RR LG+E +LA RCP C E +TT HAR
Sbjct: 452 AQHKLGKAINKIQLEKFMESLEHLPQEAVPPTRDNPYGGQEARNMAYARTRSSQGQGGHAFLRAAPTDRAREIPSNEFVYATRRALGVEEFLAERCPRCHRGREGEIITTVHAR 565
BLAST of mRNA_H-paniculata_contig17097.3964.1 vs. uniprot
Match: A0A6H5JQ53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ53_9PHAE) HSP 1 Score: 76.6 bits (187), Expect = 1.830e-11 Identity = 44/114 (38.60%), Postives = 60/114 (52.63%), Query Frame = 3
Query: 909 AARKVGNLVHKAKITTLLSLLDSLPPAGRPPGPDDPLGGVEQADAAKSRFRGMSGTEALTVERAQPSDNARTVPPAEYVLMERRFLGIEPYLAARCPCCG----AEDVTTRHAR 1238
A K+G ++K ++ + L+ LP PP D+P GG E + A +R R G T RA +D AR +P E+V RR LG+E +LA RCP C E +TT HAR
Sbjct: 159 AQHKLGKAINKIQLEKFMESLEHLPQEAVPPTRDNPYGGQEARNMAYARTRSSQGQGGHTFLRAAATDRAREIPSNEFVYATRRALGVEEFLAERCPRCHRGREGEIITTVHAR 272
BLAST of mRNA_H-paniculata_contig17097.3964.1 vs. uniprot
Match: A0A6H5JHZ7_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHZ7_9PHAE) HSP 1 Score: 76.6 bits (187), Expect = 2.330e-11 Identity = 44/114 (38.60%), Postives = 60/114 (52.63%), Query Frame = 3
Query: 909 AARKVGNLVHKAKITTLLSLLDSLPPAGRPPGPDDPLGGVEQADAAKSRFRGMSGTEALTVERAQPSDNARTVPPAEYVLMERRFLGIEPYLAARCPCCG----AEDVTTRHAR 1238
A ++G V+K ++ + L+ LP PP D+P GG E + A +R R G RA P+D AR +P E+V RR LG+E +LA RCP C E +TT HAR
Sbjct: 382 AQHELGKAVNKIQLEKFMESLEHLPQEAVPPTRDNPYGGQEARNMAYARTRSSQGQGGHAFLRAAPTDRAREIPSNEFVYATRRALGVEEFLAERCPRCHRGREGEIITTVHAR 495
BLAST of mRNA_H-paniculata_contig17097.3964.1 vs. uniprot
Match: A0A6H5K195_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K195_9PHAE) HSP 1 Score: 76.6 bits (187), Expect = 3.030e-11 Identity = 43/114 (37.72%), Postives = 60/114 (52.63%), Query Frame = 3
Query: 909 AARKVGNLVHKAKITTLLSLLDSLPPAGRPPGPDDPLGGVEQADAAKSRFRGMSGTEALTVERAQPSDNARTVPPAEYVLMERRFLGIEPYLAARCPCCG----AEDVTTRHAR 1238
A K+G ++K ++ + L+ LP PP D+P GG E + A +R R G RA P+D AR +P E+V RR LG+E +LA +CP C E +TT HAR
Sbjct: 863 AQHKLGKAINKIQLEKFMESLEHLPQEAVPPTRDNPYGGQEARNMAYARTRSSQGQGGHAFLRAAPTDRAREIPSNEFVYATRRALGVEEFLAEKCPRCHRGREGEIITTVHAR 976
BLAST of mRNA_H-paniculata_contig17097.3964.1 vs. uniprot
Match: A0A6H5JNP7_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNP7_9PHAE) HSP 1 Score: 75.9 bits (185), Expect = 3.530e-11 Identity = 45/114 (39.47%), Postives = 59/114 (51.75%), Query Frame = 3
Query: 909 AARKVGNLVHKAKITTLLSLLDSLPPAGRPPGPDDPLGGVEQADAAKSRFRGMSGTEALTVERAQPSDNARTVPPAEYVLMERRFLGIEPYLAARCPCCG----AEDVTTRHAR 1238
A K+G V+K ++ + L+ LP PP D+P GG E + A +R R G RA PSD AR + E+V RR LG+E +LA RCP C E +TT HAR
Sbjct: 292 AQHKLGKAVNKIQLEKFMESLEHLPQEAVPPTRDNPYGGQEARNMAYARTRSSQGQGGHAFLRAAPSDRAREIRSNEFVYATRRALGVEEFLAERCPRCHRGREGEIITTVHAR 405
BLAST of mRNA_H-paniculata_contig17097.3964.1 vs. uniprot
Match: A0A6H5KTK7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTK7_9PHAE) HSP 1 Score: 71.6 bits (174), Expect = 5.170e-10 Identity = 44/114 (38.60%), Postives = 59/114 (51.75%), Query Frame = 3
Query: 909 AARKVGNLVHKAKITTLLSLLDSLPPAGRPPGPDDPLGGVEQADAAKSRFRGMSGTEALTVERAQPSDNARTVPPAEYVLMERRFLGIEPYLAARCPCCGA----EDVTTRHAR 1238
A K+G V K ++ + L+ +P PP D+P GG E + A +R R G RA P+D AR +P E+V RR LG+E +LA RCP C E +TT HAR
Sbjct: 159 AQHKLGKAV-KIQLEKFMESLEHVPQEAVPPTRDNPYGGQEARNMAYARTRSSQGQGGHAFLRAAPTDRAREIPSNEFVYATRRALGVEEFLAERCPRCHRGREREIITTVHAR 271
BLAST of mRNA_H-paniculata_contig17097.3964.1 vs. uniprot
Match: A0A6H5JLG6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLG6_9PHAE) HSP 1 Score: 72.0 bits (175), Expect = 8.530e-10 Identity = 44/114 (38.60%), Postives = 59/114 (51.75%), Query Frame = 3
Query: 909 AARKVGNLVHKAKITTLLSLLDSLPPAGRPPGPDDPLGGVEQADAAKSRFRGMSGTEALTVERAQPSDNARTVPPAEYVLMERRFLGIEPYLAARCPCC--GAED--VTTRHAR 1238
A K+G ++ ++ L+ L LP PP D+P GG E + A +R R G RA P+D AR +P E+V RR LG+E +LA RCP C G E +TT AR
Sbjct: 553 AQHKLGKAINDIQLEKLMESLKHLPQEAVPPTRDNPYGGQEARNMAYARTRSSKGQGGHAFLRAAPTDRAREIPSNEFVYATRRALGVEEFLAERCPRCHKGREGQIITTVQAR 666 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17097.3964.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig17097.3964.1 >prot_H-paniculata_contig17097.3964.1 ID=prot_H-paniculata_contig17097.3964.1|Name=mRNA_H-paniculata_contig17097.3964.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=317bp GSEGGAVGLPGRSGAGNGGADGRKLTGDSFSRASASTHRSADQQRQDKGGback to top mRNA from alignment at H-paniculata_contig17097:282..1547+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig17097.3964.1 ID=mRNA_H-paniculata_contig17097.3964.1|Name=mRNA_H-paniculata_contig17097.3964.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1266bp|location=Sequence derived from alignment at H-paniculata_contig17097:282..1547+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig17097:282..1547+ >mRNA_H-paniculata_contig17097.3964.1 ID=mRNA_H-paniculata_contig17097.3964.1|Name=mRNA_H-paniculata_contig17097.3964.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1902bp|location=Sequence derived from alignment at H-paniculata_contig17097:282..1547+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |