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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 1893 |
| Cds size | 1890 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig17084.3958.1 >prot_H-paniculata_contig17084.3958.1 ID=prot_H-paniculata_contig17084.3958.1|Name=mRNA_H-paniculata_contig17084.3958.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=630bp
SPATAPSVTLPPTTSTASESTIAPVASPQPVAPQLVTLQPGTISLTDPPI
EPPASTPLVPSPSPVIKPPFSMTPSPSVTPPTTSSSDVILTTQPVTTLMT
PPPGDSVAPVQPGASTTVSPQVQPPVAPSDEPIVSPSIAPGEAMPPAISS
SPPAVTLPVVSTGFPSPAPTVVPPALDMPMAMPTDATISPEAQRAETSNP
PFMSPSTSEQPVFLLPVASDSPVPKSVAPAAQTTTTMLPTPVPNPTSTIG
TPSPARTVRPVSTSTDSPITTVPSPPTVDTSLDATPSPSTTTTQQTVSPE
TSISSAVSTAPPLASDETNSPSHTVSPIATPGPSLTNRALPIASNYEPPT
SPPNLAPGATAAPYETREPTTPVPVTPAPSESPVTPSPFILEPPLEDTAD
VTTTAVNAAVASSAAVVTVTSVTATTGATAAAGSTAATGAAAAAGAAGGA
AGAASGATGAVAAGSGASVTTGGVVVGGATGATTGVTAAGGATSGAAAGA
GAAGAGSSAATGAGAATGAAGAGSSAATGAGAATGATGAGATTATGAGAA
TGTGAATGATGAGAATGTGAATGATGTGAATGATGGGGATGATGTGVATG
ATGTGAATGATGTGAATGATGTGVATGATS back to topmRNA from alignment at H-paniculata_contig17084:268..3588- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig17084.3958.1 ID=mRNA_H-paniculata_contig17084.3958.1|Name=mRNA_H-paniculata_contig17084.3958.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3321bp|location=Sequence derived from alignment at H-paniculata_contig17084:268..3588- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCACCTGCGACAGCGCCATCGGTTACTCTACCACCAACTACTTCAACAGC
ATCTGAGTCAACAATAGCCCCCGTTGCCAGCCCACAGCCAGTTGCTCCGC
AACTGGTAACTTTGCAGCCCGGTACAATCTCGCTCACCGACCCTCCGATA
GAACCACCGGCTTCAACACCACTAGTGCCGTCTCCATCCCCCGTGATAAA
GCCGCCTTTTTCGATGACACCGTCGCCTAGTGTCACACCGCCTACTACGT
CGTCTTCCGACGTTATCCTTACGACACAGCCGGTGACAACGCTGATGGTA
CGTCCTTTGTGCTTGTTTTGAGAATAGTTATGGTTTTGGTGTTGTTGCGT
AGGATTCGCCAGCCTGCGTTCTTCTGTTTATATTATGCTCGTGAGGATTC
CTTGAGCATTAGGTTTGACTGTTTTTTTTTATGTTCATTTTAGTACCATT
TACAAACACGAATAGACGAAGTCCATCCGTTATACGCAGTCTCACGCTTT
CTCATTTGAACTCATTTTTGCAGACACCGCCTCCGGGCGATTCTGTCGCT
CCCGTGCAACCAGGTGCATCGACAACGGTCTCGGTGAGTAACTTCTAAAG
AAGGAAGAATGTTGCCGGCAGTTCAGTTTTTTTTCTTTTTCTTTGCAAGC
TGTATTTGTGTGTATTGAGGCATGTCCGAGTAGTTAGTAGCCGCTTCTCC
TGTTGCTGTTTGATTTACGTTCATATTCTACAAAACTGGCCCAACGCTTC
ACGGTAATACCTCGCCGAAATTTATTCGTGTGCTCCTTTATTCTTGGACG
CTCCTTCCCGTACATGGCTTGCAAATGACCCACGTGGATCCGGGGTCTGA
ACCTCTTACGTCGTAAGACCTTGACATCATTACAGGGAAAATGGACCGCT
TTGTTACAGCAGAATGAGTTGCATGATAAATGGCACGGCTTGGCGTGACT
CTGTGCGCGACGACTGTAGCTCTTTGCATGTTGATTAGGCGGCAATGCAT
ATGCAGTTCGTTACTATTGCACAGATGGATTGAGGCGAATTCCATCGTTT
TCTTAGGGTGGTTCTGTCAGATACGAAGTCCGTTGGTTTGTGTCAACAAT
CCTTACTAGTGGAAAATGGCGTGTTCACTGGGATGATCGTATTTTCGGAT
TGTAAAACAAAATCCACGCGCCGACTGTGACGGTGCAGGGGTGTATGATT
ATAGCATCTTCGCACAAAGTCAAGAAATTATTCGAACGTTGTCATAGGGC
AAGAGGTCACGGGAAATTATACGAACGCTGTCATTTTTGCAGGAGATGCC
ACCAGCCGGTGCGACCAATAACTATACCCAGCCCATTTTGCCTACCCTTC
TGTTCCTCTCTTGGTTCATCAGACTTGGCGTGCCTTGGTGATAGGTGGTT
TCTTTTTATAGTTTAACGCATCGTTGGTGATCGACCACGTGCTGGTAGCA
CCCAGGGAATATCCAGATCAAGGACGTTTTTCCCCGTAATCTATTGCCAA
GCATTTTATGCCCCTTGTCTGCGTCTTTTCCCATCCCCTTGTTCGTGTAC
GCAGCCACAAGTTCAACCTCCCGTGGCACCAAGTGATGAACCGATCGGTA
AGTGATTTGTTGCGTAGTTAAAAGTAAAGGTATGTCCACTATTTTTCCCC
GTTTTTGGTTCATGATGTTGATGAAGCATTAGACCAGAAACATACATCCT
GTGTCGTGGACTATATACGGTGCATTTTTATCAACTCTGATACCGTGCGC
CGTCGCCTCGTCTTGTGGTTCCATCTCCCTTCACGTCTACCATCTTGTTC
TTCACTACCGCATTGTGATGACTCAACAGTGTCGCCATCGATCGCACCAG
GCGAAGCAATGCCGCCTGCGATATCTTCGTCACCACCTGCGGTAACACTT
CCCGTTGTTTCAACCGGATTCCCTTCCCCCGCCCCCACAGTCGTACCACC
CGCTCTTGATATGCCCATGGCCATGCCAACAGATGCAACTATTTCCCCGG
AGGCACAGCGGGCAGAAACCTCCAACCCCCCTTTCATGTCCCCTTCTACA
TCAGAGCAACCAGTTTTTCTATTACCAGTAGCTTCCGATTCCCCTGTTCC
AAAGTCTGTAGCACCTGCCGCTCAGACAACGACAACAATGTTGCCGACCC
CTGTACCGAATCCCACCTCGACTATCGGCACACCGTCCCCCGCACGCACC
GTCAGGCCGGTCAGTACATCGACTGACTCACCCATCACGACTGTTCCCTC
CCCGCCCACTGTTGACACGTCACTCGATGCCACTCCTTCACCATCAACAA
CGACAACCCAACAAACTGTATCTCCGGAGACCTCAATATCGAGTGCCGTG
AGTACTGCTCCCCCCCTCGCTTCAGATGAAACCAACTCGCCCAGCCATAC
TGTCTCACCCATCGCGACCCCGGGGCCGAGCTTGACCAACCGTGCCCTCC
CTATTGCATCAAACTATGAGCCTCCGACTTCCCCACCCAACCTGGCACCG
GGTGCCACTGCAGCCCCGTACGAGACGCGCGAACCCACTACACCCGTCCC
AGTCACCCCAGCACCCAGTGAAAGCCCAGTTACTCCGAGTCCATTCATAC
TCGAACCACCTCTCGAGGATACGGCCGATGTTACCACTACTGCAGTGAAC
GCCGCGGTGGCCAGCTCTGCCGCCGTGGTTACGGTAACTTCCGTCACAGC
CACTACAGGGGCAACTGCAGCCGCGGGATCGACCGCCGCTACAGGGGCAG
CTGCCGCTGCCGGGGCGGCGGGCGGCGCCGCAGGGGCGGCTAGTGGCGCT
ACGGGAGCGGTGGCTGCAGGAAGTGGAGCTTCTGTCACCACCGGAGGCGT
TGTTGTTGGGGGGGCTACGGGAGCCACCACTGGAGTCACTGCAGCTGGTG
GAGCAACATCAGGCGCTGCCGCGGGTGCAGGAGCCGCAGGTGCTGGAAGT
TCTGCGGCGACTGGCGCCGGAGCGGCCACGGGTGCCGCGGGTGCCGGAAG
TTCCGCGGCTACTGGTGCCGGAGCGGCTACAGGTGCCACCGGCGCGGGAG
CCACGACAGCTACCGGCGCCGGAGCGGCCACCGGAACTGGAGCGGCGACG
GGTGCCACCGGCGCCGGAGCGGCCACCGGCACTGGAGCGGCGACGGGAGC
TACCGGTACTGGAGCAGCGACGGGAGCCACCGGCGGTGGAGGGGCGACCG
GTGCCACCGGCACTGGAGTGGCGACCGGTGCCACTGGTACTGGAGCGGCG
ACGGGAGCCACCGGTACTGGAGCGGCGACGGGAGCCACCGGCACTGGAGT
GGCGACCGGTGCCACTAGTAC back to topCoding sequence (CDS) from alignment at H-paniculata_contig17084:268..3588- >mRNA_H-paniculata_contig17084.3958.1 ID=mRNA_H-paniculata_contig17084.3958.1|Name=mRNA_H-paniculata_contig17084.3958.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3780bp|location=Sequence derived from alignment at H-paniculata_contig17084:268..3588- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCACCTGCGACAGCGCCATCGGTTACTCTACCACCAACTACTTCAACAGC
ATCTGAGTCAACAATAGCCCCCGTTGCCAGCCCACAGCCAGTTGCTCCGC
AACTGGTAACTTTGCAGCCCGGTACAATCTCGCTCACCGACCCTCCGATA
GAACCACCGGCTTCAACACCACTAGTGCCGTCTCCATCCCCCGTGATAAA
GCCGCCTTTTTCGATGACACCGTCGCCTAGTGTCACACCGCCTACTACGT
CGTCTTCCGACGTTATCCTTACGACACAGCCGGTGACAACGCTGATGTCA
CCTGCGACAGCGCCATCGGTTACTCTACCACCAACTACTTCAACAGCATC
TGAGTCAACAATAGCCCCCGTTGCCAGCCCACAGCCAGTTGCTCCGCAAC
TGGTAACTTTGCAGCCCGGTACAATCTCGCTCACCGACCCTCCGATAGAA
CCACCGGCTTCAACACCACTAGTGCCGTCTCCATCCCCCGTGATAAAGCC
GCCTTTTTCGATGACACCGTCGCCTAGTGTCACACCGCCTACTACGTCGT
CTTCCGACGTTATCCTTACGACACAGCCGGTGACAACGCTGATGACACCG
CCTCCGGGCGATTCTGTCGCTCCCGTGCAACCAGGTGCATCGACAACGGT
CTCGACACCGCCTCCGGGCGATTCTGTCGCTCCCGTGCAACCAGGTGCAT
CGACAACGGTCTCGCCACAAGTTCAACCTCCCGTGGCACCAAGTGATGAA
CCGATCGCCACAAGTTCAACCTCCCGTGGCACCAAGTGATGAACCGATCG
TGTCGCCATCGATCGCACCAGGCGAAGCAATGCCGCCTGCGATATCTTCG
TCACCACCTGCGGTAACACTTCCCGTTGTTTCAACCGGATTCCCTTCCCC
CGCCCCCACAGTCGTACCACCCGCTCTTGATATGCCCATGGCCATGCCAA
CAGATGCAACTATTTCCCCGGAGGCACAGCGGGCAGAAACCTCCAACCCC
CCTTTCATGTCCCCTTCTACATCAGAGCAACCAGTTTTTCTATTACCAGT
AGCTTCCGATTCCCCTGTTCCAAAGTCTGTAGCACCTGCCGCTCAGACAA
CGACAACAATGTTGCCGACCCCTGTACCGAATCCCACCTCGACTATCGGC
ACACCGTCCCCCGCACGCACCGTCAGGCCGGTCAGTACATCGACTGACTC
ACCCATCACGACTGTTCCCTCCCCGCCCACTGTTGACACGTCACTCGATG
CCACTCCTTCACCATCAACAACGACAACCCAACAAACTGTATCTCCGGAG
ACCTCAATATCGAGTGCCGTGAGTACTGCTCCCCCCCTCGCTTCAGATGA
AACCAACTCGCCCAGCCATACTGTCTCACCCATCGCGACCCCGGGGCCGA
GCTTGACCAACCGTGCCCTCCCTATTGCATCAAACTATGAGCCTCCGACT
TCCCCACCCAACCTGGCACCGGGTGCCACTGCAGCCCCGTACGAGACGCG
CGAACCCACTACACCCGTCCCAGTCACCCCAGCACCCAGTGAAAGCCCAG
TTACTCCGAGTCCATTCATACTCGAACCACCTCTCGAGGATACGGCCGAT
GTTACCACTACTGCAGTGAACGCCGCGGTGGCCAGCTCTGCCGCCGTGGT
TACGGTAACTTCCGTCACAGCCACTACAGGGGCAACTGCAGCCGCGGGAT
CGACCGCCGCTACAGGGGCAGCTGCCGCTGCCGGGGCGGCGGGCGGCGCC
GCAGGGGCGGCTAGTGGCGCTACGGGAGCGGTGGCTGCAGGAAGTGGAGC
TTCTGTCACCACCGGAGGCGTTGTTGTTGGGGGGGCTACGGGAGCCACCA
CTGGAGTCACTGCAGCTGGTGGAGCAACATCAGGCGCTGCCGCGGGTGCA
GGAGCCGCAGGTGCTGGAAGTTCTGCGGCGACTGGCGCCGGAGCGGCCAC
GGGTGCCGCGGGTGCCGGAAGTTCCGCGGCTACTGGTGCCGGAGCGGCTA
CAGGTGCCACCGGCGCGGGAGCCACGACAGCTACCGGCGCCGGAGCGGCC
ACCGGAACTGGAGCGGCGACGGGTGCCACCGGCGCCGGAGCGGCCACCGG
CACTGGAGCGGCGACGGGAGCTACCGGTACTGGAGCAGCGACGGGAGCCA
CCGGCGGTGGAGGGGCGACCGGTGCCACCGGCACTGGAGTGGCGACCGGT
GCCACTGGTACTGGAGCGGCGACGGGAGCCACCGGTACTGGAGCGGCGAC
GGGAGCCACCGGCACTGGAGTGGCGACCGGTGCCACTAGTTGTCGCCATC
GATCGCACCAGGCGAAGCAATGCCGCCTGCGATATCTTCGTCACCACCTG
CGGTAACACTTCCCGTTGTTTCAACCGGATTCCCTTCCCCCGCCCCCACA
GTCGTACCACCCGCTCTTGATATGCCCATGGCCATGCCAACAGATGCAAC
TATTTCCCCGGAGGCACAGCGGGCAGAAACCTCCAACCCCCCTTTCATGT
CCCCTTCTACATCAGAGCAACCAGTTTTTCTATTACCAGTAGCTTCCGAT
TCCCCTGTTCCAAAGTCTGTAGCACCTGCCGCTCAGACAACGACAACAAT
GTTGCCGACCCCTGTACCGAATCCCACCTCGACTATCGGCACACCGTCCC
CCGCACGCACCGTCAGGCCGGTCAGTACATCGACTGACTCACCCATCACG
ACTGTTCCCTCCCCGCCCACTGTTGACACGTCACTCGATGCCACTCCTTC
ACCATCAACAACGACAACCCAACAAACTGTATCTCCGGAGACCTCAATAT
CGAGTGCCGTGAGTACTGCTCCCCCCCTCGCTTCAGATGAAACCAACTCG
CCCAGCCATACTGTCTCACCCATCGCGACCCCGGGGCCGAGCTTGACCAA
CCGTGCCCTCCCTATTGCATCAAACTATGAGCCTCCGACTTCCCCACCCA
ACCTGGCACCGGGTGCCACTGCAGCCCCGTACGAGACGCGCGAACCCACT
ACACCCGTCCCAGTCACCCCAGCACCCAGTGAAAGCCCAGTTACTCCGAG
TCCATTCATACTCGAACCACCTCTCGAGGATACGGCCGATGTTACCACTA
CTGCAGTGAACGCCGCGGTGGCCAGCTCTGCCGCCGTGGTTACGGTAACT
TCCGTCACAGCCACTACAGGGGCAACTGCAGCCGCGGGATCGACCGCCGC
TACAGGGGCAGCTGCCGCTGCCGGGGCGGCGGGCGGCGCCGCAGGGGCGG
CTAGTGGCGCTACGGGAGCGGTGGCTGCAGGAAGTGGAGCTTCTGTCACC
ACCGGAGGCGTTGTTGTTGGGGGGGCTACGGGAGCCACCACTGGAGTCAC
TGCAGCTGGTGGAGCAACATCAGGCGCTGCCGCGGGTGCAGGAGCCGCAG
GTGCTGGAAGTTCTGCGGCGACTGGCGCCGGAGCGGCCACGGGTGCCGCG
GGTGCCGGAAGTTCCGCGGCTACTGGTGCCGGAGCGGCTACAGGTGCCAC
CGGCGCGGGAGCCACGACAGCTACCGGCGCCGGAGCGGCCACCGGAACTG
GAGCGGCGACGGGTGCCACCGGCGCCGGAGCGGCCACCGGCACTGGAGCG
GCGACGGGAGCTACCGGTACTGGAGCAGCGACGGGAGCCACCGGCGGTGG
AGGGGCGACCGGTGCCACCGGCACTGGAGTGGCGACCGGTGCCACTGGTA
CTGGAGCGGCGACGGGAGCCACCGGTACTGGAGCGGCGACGGGAGCCACC
GGCACTGGAGTGGCGACCGGTGCCACTAGT back to top
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