prot_H-paniculata_contig17052.3950.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17052.3950.1
Unique Nameprot_H-paniculata_contig17052.3950.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length181
Homology
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BLAST of mRNA_H-paniculata_contig17052.3950.1 vs. uniprot
Match: A0A6H5JNU2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JNU2_9PHAE)

HSP 1 Score: 157 bits (397), Expect = 3.830e-41
Identity = 92/169 (54.44%), Postives = 107/169 (63.31%), Query Frame = 0 
Query:   25 GPDPPVVTRVLPPGLEPSRAEPPEFDPDPALRLERALCYTGDSLSD--TLAFVG-GDRLVAFPSNNVVVLMETPSTSE-----------------QQQQQPSTGLPSSGLPGNDKVTPCRSHVFLRGHTDRVTHLKMSTAGHILASAQGDALGGAGGRGIVRLWDMASF 173
            G DPPVV+RVLPPGLE SR +PPEFDPDPALRL+RALCYTG  LS   T+ FVG G   +AFP NNV+VLMETP   E                 +++          GL    +  P   H+FLRGHTD VT L++S AGH+LASAQGD LG AGG GIVRLW+  S 
Sbjct:  597 GMDPPVVSRVLPPGLESSRPDPPEFDPDPALRLQRALCYTGGDLSGSTTVTFVGRGAEFMAFPCNNVIVLMETPVMPEAVFLGDGPAGMDEGVGAEKEAXXXXXXXRDGLLALQQPAPA-PHIFLRGHTDTVTRLQLSHAGHLLASAQGDPLGAAGGHGIVRLWNATSL 764
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17052.3950.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JNU2_9PHAE3.830e-4154.44Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 56..176
e-value: 8.2E-7
score: 30.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17052contigH-paniculata_contig17052:2900..5241 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17052.3950.1mRNA_H-paniculata_contig17052.3950.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17052 2900..5242 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17052.3950.1 ID=prot_H-paniculata_contig17052.3950.1|Name=mRNA_H-paniculata_contig17052.3950.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=181bp
EEEGGGEEVGGMGARLARECETEGGPDPPVVTRVLPPGLEPSRAEPPEFD
PDPALRLERALCYTGDSLSDTLAFVGGDRLVAFPSNNVVVLMETPSTSEQ
QQQQPSTGLPSSGLPGNDKVTPCRSHVFLRGHTDRVTHLKMSTAGHILAS
AQGDALGGAGGRGIVRLWDMASFADGASSGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf