prot_H-paniculata_contig1696.3897.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1696.3897.1
Unique Nameprot_H-paniculata_contig1696.3897.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length251
Homology
BLAST of mRNA_H-paniculata_contig1696.3897.1 vs. uniprot
Match: D8LP04_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LP04_ECTSI)

HSP 1 Score: 265 bits (677), Expect = 4.150e-86
Identity = 134/195 (68.72%), Postives = 156/195 (80.00%), Query Frame = 0
Query:    5 LASLTLTVATVPLARAQFGMPPKQRSSPIKGDLSAIKCGVCQALADHMYAKVDEMREVAPFGKVHEDEISSVMELACDPTTPEGRWMTQYDIVEDEEYLKLKKPGGMSHCKEECETIAKSCSALVGDELDEEELVVALWKNKLESEAFRKVMCEDWSERCSGK-RVKAPKDRQDFEFMEKSAKDFEMDDLMASLQ 198
            LA LTL  A +PL  AQFGMPPK +S P+KGDL+AIKCGVCQ LA+H+Y KV EMRE APFGKVHED+IS+V+E ACDP T EGRW+T+YDIVE+  YL+LKK    SHCKEECETIAKSC+ LV DELD EE+VVALWKNKL     +K  C +WS+RCSGK RVKAPKDRQD+EF  K+AKDFE+ + M  LQ
Sbjct:    4 LAVLTLAAAAIPL-NAQFGMPPKPKSDPVKGDLAAIKCGVCQGLAEHLYEKVAEMREAAPFGKVHEDDISTVIEGACDPATKEGRWITEYDIVEEGGYLELKKQDSFSHCKEECETIAKSCTVLVDDELDVEEVVVALWKNKLGLSELQKAACGEWSDRCSGKKRVKAPKDRQDYEFEPKTAKDFEVAEAMERLQ 197          
BLAST of mRNA_H-paniculata_contig1696.3897.1 vs. uniprot
Match: UPI000A2A7991 (uncharacterized protein LOC110237839 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A7991)

HSP 1 Score: 100 bits (249), Expect = 1.300e-21
Identity = 52/176 (29.55%), Postives = 94/176 (53.41%), Query Frame = 0
Query:   25 PPKQRSSPIKGDLSAIKCGVCQALADHMYAKVDEMREVAPFGKVHEDEISSVMELACDPTTPEGRWMTQYDIVEDEEYLKLKKPGGMSHCKEECETIAKSCSALVGDELDEEELVVALWKNKLESEAFRKVMCEDWSERCSGKRVKAPKDRQDFEFMEKSAKDFEMDDLMASLQGM 200
            P K++   +K ++  I+C  CQ    ++Y K  EM++ A   K+ E+EI +++E +C+P   EG W++++D+V D   L+L +      C++EC+TIAK+C   +G+   + +L   LW++KL         C   S  C     K    R D EF+  S  + + D ++  ++G+
Sbjct:   31 PKKEKFYAVKEEVKFIRCETCQKAVKYLYRKAKEMKDKATTKKISEEEIINLVEKSCNPGKEEGEWISKFDLVADNNELRLVEKQBFGRCRKECQTIAKACEESIGEA--DTDLGELLWQDKLSLSKLINKFCYSMSSSCKSNNPKFKGKRADEEFLVMSEDERKADQVLKQMRGI 204          
BLAST of mRNA_H-paniculata_contig1696.3897.1 vs. uniprot
Match: A0A7S0QAU7_9EUKA (Hypothetical protein n=2 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0QAU7_9EUKA)

HSP 1 Score: 76.3 bits (186), Expect = 6.150e-13
Identity = 66/212 (31.13%), Postives = 102/212 (48.11%), Query Frame = 0
Query:    8 LTLTVATVPLARAQFGM---PPKQRSSPIKGDLSAIKCGVCQALADHMYAKVDEMREVAPFGKVHEDEISSVMELACDPTTP-------EGRWMTQYDIVEDEEYLKLKKPGGMSHCKEECETIAKSCSALVGDELDEEELVVALWKNKLESEA---FRKVMCEDWSERCSGKRVKAP-----KDRQDFEFMEKSAKDFEMDDLMASLQGMG 201
            LT  VA+V    AQFGM   P K +S+P+  DL  +KC  C+ +        + +R+ +      +  +  ++E  CD           EG WM++ DI +  + L L   G   HC+ EC TIAK C  ++G  LD +E+   +     E  +     + +C   +  C  K+ K P     K R+D  F  K  KD E++DL+AS++GMG
Sbjct:   17 LTAAVASV---CAQFGMDQMPKKPKSAPLPDDLKYLKCETCKRMV------TEAVRQASSLST--QSAVEDMLEKVCDADADGKEGRGSEGIWMSELDISKKGQALVLSHRGA-GHCRRECRTIAKVCDGVLG-RLDADEIAEVIRDGAREGTSAGMMAQRVCTKMAGVC--KKGKVPLWPEGKVRKDETFKPKDKKDDELEDLLASMKGMG 213          
BLAST of mRNA_H-paniculata_contig1696.3897.1 vs. uniprot
Match: A0A7S4MLP3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4MLP3_9EUKA)

HSP 1 Score: 67.4 bits (163), Expect = 3.580e-10
Identity = 48/154 (31.17%), Postives = 77/154 (50.00%), Query Frame = 0
Query:   17 LARAQFGM---PPKQRSSPIKGDLSAIKCGVCQALADHMYAKVD---EMREVAPFGKVH----------EDEISSVMELACDPTTPEGRWMTQYDIVEDEEYLKLKKP------GGMSHCKEECETIAKSCSALVGDELDEE--ELVVALWKNK 146
            +ARAQ GM   P K +  PI  D+  I+C  C+ +      +V+   ++ +  P  K            E  +  V+   C    P+G+WM++YDIV+ +  LKL+        GG  HCK EC TI K+C+ ++ + +DE+  EL++   K K
Sbjct:   19 VARAQMGMDGLPKKPKPQPIDSDVKYIRCQTCELMVARALEQVNTAVKLEKPKPQQKRRFDSSSNLGGLESTVEDVVTSICSSEDPQGKWMSEYDIVKRDRALKLENQVNDDVVGG--HCKRECRTIEKACAGVL-EAVDEDLPELLLEAAKTK 169          
BLAST of mRNA_H-paniculata_contig1696.3897.1 vs. uniprot
Match: A0A7S2CPR7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CPR7_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 5.870e-7
Identity = 56/207 (27.05%), Postives = 87/207 (42.03%), Query Frame = 0
Query:   34 KGDLSAIKCGVCQALADHMYAKVDEMREVAPFGKV-------------HEDEISSVMELACDPTTPEGRWMTQYDIVE--------DEEYL-----KLKKPGGMSHC------------KEECETIAKSCSALVGDELDEEELVVALWKNKLESEAFRKVMCEDWSERCSGK-RVKAPKDRQDFEFMEKSAKDFEMDDLMASLQGMG 201
            K DL  I C VC+ + + +    +E R  AP   V              EDE+  ++   C      G W+ + D+VE        ++ ++     K +K  G S+               E  T+ +SC  L  D +D +EL VALWK +L+  A   + CE+ S  C  K R K   +R D  F    A+  E + +M S++  G
Sbjct:   47 KYDLKLIGCDVCRFVVEQVREATEEKRAEAPIVSVAVRPGKKERRSSFSEDEVQEILGDVCHRKKKVGAWLWRTDLVEHTAKSTKHNQSFVYRPITKSEKKNGGSYLLIEHHPDYYGVWDREKATVQRSCERLFED-MDVDELSVALWKGELDEAALVSLTCEELSNSCGKKNRPKLMLERDDIAFEVTDAQLVETEQMMQSMEDSG 252          
BLAST of mRNA_H-paniculata_contig1696.3897.1 vs. uniprot
Match: A0A2P6TZY0_CHLSO (CURVATURE THYLAKOID chloroplastic-like isoform A n=2 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TZY0_CHLSO)

HSP 1 Score: 54.3 bits (129), Expect = 4.130e-5
Identity = 30/108 (27.78%), Postives = 53/108 (49.07%), Query Frame = 0
Query:   68 VHEDEISSVMELACDPTTPEGRWMTQYDIVEDEEYLKLKKPGGMSHCKEECETIAKSCSALVGDELDEEELVVALWKNKLESEAFRKVMCEDWSERCSGKRVKAPKDR 175
            +HED +  ++E       PEG+W+TQ ++VE  E L +++      C E C T+ ++   ++G+   + ++  AL+  K     F   +C + S  C  K    PK R
Sbjct:    1 MHEDRLIELVEQLTSAGQPEGKWLTQLELVEQGERLVVQETQQAGTCGEACRTVERAAEQIMGEH--DTDVAEALFVGKKSRAQFSNWLCYELSSACKHKPPPLPKAR 106          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1696.3897.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LP04_ECTSI4.150e-8668.72Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
UPI000A2A79911.300e-2129.55uncharacterized protein LOC110237839 n=1 Tax=Exaip... [more]
A0A7S0QAU7_9EUKA6.150e-1331.13Hypothetical protein n=2 Tax=Coccolithus braarudii... [more]
A0A7S4MLP3_9EUKA3.580e-1031.17Hypothetical protein (Fragment) n=1 Tax=Prymnesium... [more]
A0A7S2CPR7_9STRA5.870e-727.05Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A2P6TZY0_CHLSO4.130e-527.78CURVATURE THYLAKOID chloroplastic-like isoform A n... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36058:SF1NUCLEOPHOSMINcoord: 10..221
NoneNo IPR availablePANTHERPTHR36058FAMILY NOT NAMEDcoord: 10..221
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..250
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.643

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1696contigH-paniculata_contig1696:19208..22881 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1696.3897.1mRNA_H-paniculata_contig1696.3897.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1696 19147..23429 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1696.3897.1 ID=prot_H-paniculata_contig1696.3897.1|Name=mRNA_H-paniculata_contig1696.3897.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=251bp
MRTGLASLTLTVATVPLARAQFGMPPKQRSSPIKGDLSAIKCGVCQALAD
HMYAKVDEMREVAPFGKVHEDEISSVMELACDPTTPEGRWMTQYDIVEDE
EYLKLKKPGGMSHCKEECETIAKSCSALVGDELDEEELVVALWKNKLESE
AFRKVMCEDWSERCSGKRVKAPKDRQDFEFMEKSAKDFEMDDLMASLQGM
GGMGGPGTQAYTPEDMEDMMGGMGGMGGMGGMEDMMGMGDRYGDFGDMEF
*
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