prot_H-paniculata_contig16913.3874.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig16913.3874.1
Unique Nameprot_H-paniculata_contig16913.3874.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length87
Homology
BLAST of mRNA_H-paniculata_contig16913.3874.1 vs. uniprot
Match: D8LKW8_ECTSI (CCHC-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKW8_ECTSI)

HSP 1 Score: 157 bits (397), Expect = 6.390e-43
Identity = 70/74 (94.59%), Postives = 72/74 (97.30%), Query Frame = 0
Query:    1 QWVKTSTNKQRCPVFCLAWAPEGVTRCITGNSSGEFTLWKDGAFNFVTILQAHESAVRSMAWSNSGNTLISGDH 74
            QWVKTSTNKQRCPVFCLAWAP GVTRCITGNSSGEFTLWKDG+FNFVTILQAH SAVRSMAWS+SGNTLISGDH
Sbjct:   71 QWVKTSTNKQRCPVFCLAWAPAGVTRCITGNSSGEFTLWKDGSFNFVTILQAHSSAVRSMAWSHSGNTLISGDH 144          
BLAST of mRNA_H-paniculata_contig16913.3874.1 vs. uniprot
Match: A0A6J8CE71_MYTCO (PFS2 n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8CE71_MYTCO)

HSP 1 Score: 123 bits (309), Expect = 4.050e-32
Identity = 52/82 (63.41%), Postives = 67/82 (81.71%), Query Frame = 0
Query:    1 QWVKTSTNKQRCPVFCLAWAPEGVTRCITGNSSGEFTLWKDGAFNFVTILQAHESAVRSMAWSNSGNTLISGDHNGIIKYWQ 82
            ++++TSTNK RCP+FCLAW PEG  R +TG SSGEFTLW    FNF TILQAH+++VR+M WSN+ + +I+GDH+G IKYWQ
Sbjct:  135 KFIRTSTNKFRCPIFCLAWTPEG-RRLVTGASSGEFTLWNGLTFNFETILQAHDTSVRAMVWSNNDSWMITGDHSGFIKYWQ 215          
BLAST of mRNA_H-paniculata_contig16913.3874.1 vs. uniprot
Match: A0A0T6BFK7_9SCAR (WD40 domain-containing protein n=1 Tax=Oryctes borbonicus TaxID=1629725 RepID=A0A0T6BFK7_9SCAR)

HSP 1 Score: 120 bits (301), Expect = 9.780e-32
Identity = 50/82 (60.98%), Postives = 65/82 (79.27%), Query Frame = 0
Query:    1 QWVKTSTNKQRCPVFCLAWAPEGVTRCITGNSSGEFTLWKDGAFNFVTILQAHESAVRSMAWSNSGNTLISGDHNGIIKYWQ 82
            ++VKT+TNK RCP+FC+AW PEG  R +TG SSGEFTLW    FNF TILQAH+S VR+M WS++ + +++GDH G +KYWQ
Sbjct:  128 RFVKTATNKMRCPIFCMAWTPEG-RRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRTMVWSHNDSWMVTGDHAGYVKYWQ 208          
BLAST of mRNA_H-paniculata_contig16913.3874.1 vs. uniprot
Match: A0A2S2R372_9HEMI (Pre-mRNA 3' end processing protein WDR33 n=12 Tax=Aphididae TaxID=27482 RepID=A0A2S2R372_9HEMI)

HSP 1 Score: 125 bits (314), Expect = 1.380e-31
Identity = 57/81 (70.37%), Postives = 63/81 (77.78%), Query Frame = 0
Query:    2 WVKTSTNKQRCPVFCLAWAPEGVTRCITGNSSGEFTLWKDGAFNFVTILQAHESAVRSMAWSNSGNTLISGDHNGIIKYWQ 82
            +VKT TNK RCPVFCLAW PEG  R ITG SSGEFTLW    FNF TILQAH+S VRSM WS++GN + +GDH G IKYWQ
Sbjct:  134 FVKTVTNKVRCPVFCLAWTPEG-RRLITGASSGEFTLWNGLTFNFETILQAHDSPVRSMVWSHNGNWMTTGDHTGFIKYWQ 213          
BLAST of mRNA_H-paniculata_contig16913.3874.1 vs. uniprot
Match: A0A8K0KG33_LADFU (Uncharacterized protein n=1 Tax=Ladona fulva TaxID=123851 RepID=A0A8K0KG33_LADFU)

HSP 1 Score: 120 bits (302), Expect = 1.800e-31
Identity = 51/82 (62.20%), Postives = 65/82 (79.27%), Query Frame = 0
Query:    1 QWVKTSTNKQRCPVFCLAWAPEGVTRCITGNSSGEFTLWKDGAFNFVTILQAHESAVRSMAWSNSGNTLISGDHNGIIKYWQ 82
            ++VKT+TNK RCP+FCLAW PEG  R +TG SSGEFTLW    FNF TILQAH+S VR+M WS++   +++GDH+G +KYWQ
Sbjct:  128 RFVKTATNKMRCPIFCLAWTPEG-RRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRTMVWSHNDVWMVTGDHSGYVKYWQ 208          
BLAST of mRNA_H-paniculata_contig16913.3874.1 vs. uniprot
Match: A0A2R5LNS0_9ACAR (Putative polyadenylation factor i complex subunit pfs2 (Fragment) n=1 Tax=Ornithodoros turicata TaxID=34597 RepID=A0A2R5LNS0_9ACAR)

HSP 1 Score: 118 bits (296), Expect = 2.240e-31
Identity = 50/82 (60.98%), Postives = 63/82 (76.83%), Query Frame = 0
Query:    1 QWVKTSTNKQRCPVFCLAWAPEGVTRCITGNSSGEFTLWKDGAFNFVTILQAHESAVRSMAWSNSGNTLISGDHNGIIKYWQ 82
            ++V+TSTNK RCP+FC+ W PEG  R ITG SSGEFTLW    FNF TILQAH+S+VR M WS++   +++GDH G +KYWQ
Sbjct:   76 KFVRTSTNKMRCPIFCVVWTPEG-RRLITGASSGEFTLWNGLTFNFETILQAHDSSVRCMVWSHNDTWMVTGDHAGYVKYWQ 156          
BLAST of mRNA_H-paniculata_contig16913.3874.1 vs. uniprot
Match: A0A2P8Z677_BLAGE (Pre-mRNA 3' end processing protein WDR33 n=1 Tax=Blattella germanica TaxID=6973 RepID=A0A2P8Z677_BLAGE)

HSP 1 Score: 119 bits (297), Expect = 2.390e-31
Identity = 50/82 (60.98%), Postives = 64/82 (78.05%), Query Frame = 0
Query:    1 QWVKTSTNKQRCPVFCLAWAPEGVTRCITGNSSGEFTLWKDGAFNFVTILQAHESAVRSMAWSNSGNTLISGDHNGIIKYWQ 82
            ++VKT+TNK RCP+FC+AW PEG  R +TG SSGEFTLW    FNF TILQAH+S VR+M WS++   +++GDH G +KYWQ
Sbjct:  128 RFVKTATNKMRCPIFCMAWTPEG-RRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRTMVWSHNDVWMVTGDHAGYVKYWQ 208          
BLAST of mRNA_H-paniculata_contig16913.3874.1 vs. uniprot
Match: A0A293LLG7_ORNER (Uncharacterized protein (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293LLG7_ORNER)

HSP 1 Score: 118 bits (296), Expect = 2.410e-31
Identity = 50/82 (60.98%), Postives = 63/82 (76.83%), Query Frame = 0
Query:    1 QWVKTSTNKQRCPVFCLAWAPEGVTRCITGNSSGEFTLWKDGAFNFVTILQAHESAVRSMAWSNSGNTLISGDHNGIIKYWQ 82
            ++V+TSTNK RCP+FC+ W PEG  R ITG SSGEFTLW    FNF TILQAH+S+VR M WS++   +++GDH G +KYWQ
Sbjct:  120 KFVRTSTNKMRCPIFCVVWTPEG-RRLITGASSGEFTLWNGLTFNFETILQAHDSSVRCMVWSHNDTWMVTGDHAGYVKYWQ 200          
BLAST of mRNA_H-paniculata_contig16913.3874.1 vs. uniprot
Match: A0A0C9QT63_9HYME (Wdr33 protein n=1 Tax=Fopius arisanus TaxID=64838 RepID=A0A0C9QT63_9HYME)

HSP 1 Score: 120 bits (300), Expect = 2.430e-31
Identity = 50/82 (60.98%), Postives = 65/82 (79.27%), Query Frame = 0
Query:    1 QWVKTSTNKQRCPVFCLAWAPEGVTRCITGNSSGEFTLWKDGAFNFVTILQAHESAVRSMAWSNSGNTLISGDHNGIIKYWQ 82
            ++VKT+TNK RCP+FC+AW PEG  R +TG SSGEFTLW    FNF TILQAH+S VR+M WS++ + +++GDH G +KYWQ
Sbjct:  148 RFVKTATNKMRCPIFCMAWTPEG-RRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRTMVWSHNESWMVTGDHAGYVKYWQ 228          
BLAST of mRNA_H-paniculata_contig16913.3874.1 vs. uniprot
Match: A0A158NE97_ATTCE (Uncharacterized protein n=3 Tax=Aculeata TaxID=7434 RepID=A0A158NE97_ATTCE)

HSP 1 Score: 120 bits (300), Expect = 2.860e-31
Identity = 50/82 (60.98%), Postives = 65/82 (79.27%), Query Frame = 0
Query:    1 QWVKTSTNKQRCPVFCLAWAPEGVTRCITGNSSGEFTLWKDGAFNFVTILQAHESAVRSMAWSNSGNTLISGDHNGIIKYWQ 82
            ++VKT+TNK RCP+FC+AW PEG  R +TG SSGEFTLW    FNF TILQAH+S VR+M WS++ + +++GDH G +KYWQ
Sbjct:  149 RFVKTATNKMRCPIFCMAWTPEG-RRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRTMVWSHNESWMVTGDHAGYVKYWQ 229          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16913.3874.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKW8_ECTSI6.390e-4394.59CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6J8CE71_MYTCO4.050e-3263.41PFS2 n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0... [more]
A0A0T6BFK7_9SCAR9.780e-3260.98WD40 domain-containing protein n=1 Tax=Oryctes bor... [more]
A0A2S2R372_9HEMI1.380e-3170.37Pre-mRNA 3' end processing protein WDR33 n=12 Tax=... [more]
A0A8K0KG33_LADFU1.800e-3162.20Uncharacterized protein n=1 Tax=Ladona fulva TaxID... [more]
A0A2R5LNS0_9ACAR2.240e-3160.98Putative polyadenylation factor i complex subunit ... [more]
A0A2P8Z677_BLAGE2.390e-3160.98Pre-mRNA 3' end processing protein WDR33 n=1 Tax=B... [more]
A0A293LLG7_ORNER2.410e-3160.98Uncharacterized protein (Fragment) n=1 Tax=Ornitho... [more]
A0A0C9QT63_9HYME2.430e-3160.98Wdr33 protein n=1 Tax=Fopius arisanus TaxID=64838 ... [more]
A0A158NE97_ATTCE2.860e-3160.98Uncharacterized protein n=3 Tax=Aculeata TaxID=743... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 43..82
e-value: 7.1E-7
score: 38.8
coord: 1..40
e-value: 5.2
score: 12.5
IPR001680WD40 repeatPFAMPF00400WD40coord: 46..81
e-value: 9.2E-6
score: 26.3
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 50..86
score: 14.452
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..86
e-value: 9.7E-17
score: 62.6
NoneNo IPR availablePANTHERPTHR22836WD40 REPEAT PROTEINcoord: 2..82
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 7..86
score: 15.32
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 10..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16913contigH-paniculata_contig16913:3932..4868 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16913.3874.1mRNA_H-paniculata_contig16913.3874.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig16913 3932..4868 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig16913.3874.1 ID=prot_H-paniculata_contig16913.3874.1|Name=mRNA_H-paniculata_contig16913.3874.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=87bp
QWVKTSTNKQRCPVFCLAWAPEGVTRCITGNSSGEFTLWKDGAFNFVTIL
QAHESAVRSMAWSNSGNTLISGDHNGIIKYWQVTNH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf