|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 928 |
| Cds size | 924 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig16901.3868.1 >prot_H-paniculata_contig16901.3868.1 ID=prot_H-paniculata_contig16901.3868.1|Name=mRNA_H-paniculata_contig16901.3868.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=308bp
VKEINAQQLRAFSDSPDEPPSSAWRRRKRSSDPTVVMIEPISLSVMEGRT
ATGKSGVIMASSQATELGLGEGSTVTLKGPDSGKTKQCTVKIEDSVLDKS
IVVSKAVMKTLKVKSSQRVSVVRPAVQSRRRHKEKTDKITSAVLDYWAAL
PPSRSTVVGNELKPTDAPLRLGQYLSSSFGSSPGLVGKSQDGEGEGDGDD
TVAAAHLMMGPSARGTGRVITGSFDSSEMLWEAGGVGKKLKTDIIDITQR
KTSWKHLPYDIPTKDSPPVTTATMSVKKGQLIVETTYAMAIGTYTRVTYR
SPAPRGWW back to topmRNA from alignment at H-paniculata_contig16901:2..2524- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig16901.3868.1 ID=mRNA_H-paniculata_contig16901.3868.1|Name=mRNA_H-paniculata_contig16901.3868.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2523bp|location=Sequence derived from alignment at H-paniculata_contig16901:2..2524- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTGAAGGAGATCAATGCACAGCAGCTCAGAGCCTTCTCCGACAGCCCCGA
TGAGCCGCCGTCATCCGCCTGGCGCCGCCGAAAGCGGAGCTCCGACCCGA
CCGTGGTCATGATCGAGCCCATCAGCCTGAGCGTCATGGAAGGCCGTACC
GCAACTGGAAAATCGGGTGTAATCATGGCTTCCTCTCAGGTGATAGTGGT
AGACAAAACAGCCGACAATCCGTGGCTCACAGTGGGGTTTATAGCTAGCG
GTTTTTCCGTTTTTGGAAAAGATATATCTGAGCCATATTGTAATGCTGTA
TTTCGAGTTGTGCCCCCGACTTCTCGGAATCCAACCTATTTCTTGAAAAC
GATATGTAGTCGTATGTTTTGGGGTCGAGTGTGCTTTTACGTTGTACTCT
AGAGGGGAACTCCAAGTGTCGATCGAGTACGGCAGCTTTGCAGCATGCTG
TGCAACGGAGAGCTGGCCTAGATGTACCTACCATTCAGCACTCCCCCCCA
ATGTCGTCGATAACTTCATGTCTGGGGAGAGGGTGTTATTCATCGTCAGC
CGTATATAGCGGGGCAGTGGACGACGTACGTTATGTTTTGGGAGTAGGAA
TGGCTTTCTCTGCTTTACGCCTGGCCGTCTGACCGTAGTGTTATTGTCTG
CTCGAAGACTATATCCCAGTTCAAGCATATATCGGTGAACTTCCTCCTCT
CCTCGACGTATTGTCGGGTGCCCCTTTCGCTCGACCCCTGCGTAAACGCG
TCAGGCGACCGAGCTCGGGCTTGGCGAGGGCTCGACGGTGACGCTAAAGG
GACCCGACTCGGGAAAAACGAAGCAATGTACCGTCAAGATCGAGGACAGC
GTCCTCGACAAGTCGATCGTGGTATCAAAGGTGAGCACATGTTTGTATAT
ACGATATATATCTGATACATTGCATTTTTCGTAGTTGTAATGAGGAACGA
AGATCCCCGGTGCTGTAGATTCTTTTACCTCAAGGCTTTCCTGTTTCCCC
TGTTGATAGCAATACGCTTCAGCCCTTACGATCAAATCAAACTAAATCGA
GTGTTCGTTGCGTCTCTTCAAGTCGCGTCACTTCGTCTTTGAATAATAAT
TGTAGAATGGCTCAACACTACTACAGTAGGACGGTACGAAATAGCTACAT
ATTCCGATAGCTTCGGTCTAGCCGTGCGAATCCCTATGGCGGTTACCAAC
GTATGGCAACTAAATATTCTTGTTAAGGTGCTTGTCAGTGCTCGTCAGTG
TTGACTAGGCGAGAATGCAATTTTCCATGAGGCACGTTTTATCTTCCAGA
AGGATTGGAATGCCCACGCTTGGGCAATACTTTCGAACTCACTGTCGCGC
GCGGTGTCACGTACGCGACCGAAGACACGTTTCAACAGCCGCTCGCCTCT
TGTGCTATTGACCAAAATATTGTTTTAAAAATCTCTCCAGCAATAAGAAC
TCTTGACCGAAATTCCACCTGCCCAGTTAATGCATGGGACCAACACTAGG
TAGAGCCAGCTCCTATTTAGCGTTTCGGGCTGACGGCAAAGACTAGACAC
CAACATCCCCTTGCGCCGTGGTGGATTGGTTTATTTGATATATGTACGTG
ATGGACAGGCGGTCATGAAAACATTGAAGGTCAAGTCTTCTCAGCGGGTA
TCTGTCGTGCGGCCAGCAGTACAGTCACGGAGAAGGCACAAGGAGAAAAC
CGACAAGATCACCTCGGCCGTTCTCGACTACTGGGCCGCCCTTCCTCCTG
TGAGTGTTGCGTGCTCAAGCTGCATAGTCCCGTTTTCGAGACCTTGTACA
AATATGAACACAGAGAGAGACAAGACTTTAAGCAGGCGCTCTTACCTGTT
TCAAGACAAAAGCGGGTGGATATCGATGCCGATGCCGATGTCGATGCCGA
TGACTGGCCCGAGAGACAGAAAAACATTCGCTCACGAGAGTCACCGTTGC
GCGTGATGTACAGTAATATTGCATCGTGTGAAGAGGTAATCGCTATATTT
TTCTTATAAGTATCTGGTGCCTTCCTCTATGCATTCATATTTTTTGGTTG
CAGTCCAGGTCCACAGTAGTGGGGAACGAGTTGAAGCCAACCGACGCTCC
GCTGCGCCTAGGGCAGTATCTTTCGTCATCGTTCGGCAGCTCACCCGGCC
TCGTAGGAAAATCACAGGATGGTGAAGGTGAAGGTGATGGTGATGACACG
GTGGCCGCAGCGCACCTCATGATGGGTCCTTCGGCCAGAGGGACTGGCAG
GGTGATCACAGGCTCTTTCGACAGCTCCGAGATGCTCTGGGAAGCTGGGG
GGGTCGGAAAAAAGTTGAAGACTGACATCATCGATATCACGCAGAGGAAG
ACTTCATGGAAGCACTTGCCGTACGATATTCCCACGAAGGACTCTCCGCC
TGTTACGACTGCAACCATGAGCGTGAAGAAAGGTCAGCTGATTGTCGAGA
CCACCTACGCCATGGCGATCGGAACGTACACGCGAGTCACCTACAGGTCT
CCCGCCCCTCGCGGCTGGTGGGA back to topCoding sequence (CDS) from alignment at H-paniculata_contig16901:2..2524- >mRNA_H-paniculata_contig16901.3868.1 ID=mRNA_H-paniculata_contig16901.3868.1|Name=mRNA_H-paniculata_contig16901.3868.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1848bp|location=Sequence derived from alignment at H-paniculata_contig16901:2..2524- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTGAAGGAGATCAATGCACAGCAGCTCAGAGCCTTCTCCGACAGCCCCGA
TGAGCCGCCGTCATCCGCCTGGCGCCGCCGAAAGCGGAGCTCCGACCCGA
CCGTGGTCATGATCGAGCCCATCAGCCTGAGCGTCATGGAAGGCCGTACC
GCAACTGGAAAATCGGGTGTAATCATGGCTTCCTCTCAGGTGAAGGAGAT
CAATGCACAGCAGCTCAGAGCCTTCTCCGACAGCCCCGATGAGCCGCCGT
CATCCGCCTGGCGCCGCCGAAAGCGGAGCTCCGACCCGACCGTGGTCATG
ATCGAGCCCATCAGCCTGAGCGTCATGGAAGGCCGTACCGCAACTGGAAA
ATCGGGTGTAATCATGGCTTCCTCTCAGGCGACCGAGCTCGGGCTTGGCG
AGGGCTCGACGGTGACGCTAAAGGGACCCGACTCGGGAAAAACGAAGCAA
TGTACCGTCAAGATCGAGGACAGCGTCCTCGACAAGTCGATCGTGGTATC
AAAGGCGACCGAGCTCGGGCTTGGCGAGGGCTCGACGGTGACGCTAAAGG
GACCCGACTCGGGAAAAACGAAGCAATGTACCGTCAAGATCGAGGACAGC
GTCCTCGACAAGTCGATCGTGGTATCAAAGGCGGTCATGAAAACATTGAA
GGTCAAGTCTTCTCAGCGGGTATCTGTCGTGCGGCCAGCAGTACAGTCAC
GGAGAAGGCACAAGGAGAAAACCGACAAGATCACCTCGGCCGTTCTCGAC
TACTGGGCCGCCCTTCCTCCTGCGGTCATGAAAACATTGAAGGTCAAGTC
TTCTCAGCGGGTATCTGTCGTGCGGCCAGCAGTACAGTCACGGAGAAGGC
ACAAGGAGAAAACCGACAAGATCACCTCGGCCGTTCTCGACTACTGGGCC
GCCCTTCCTCCTTCCAGGTCCACAGTAGTGGGGAACGAGTTGAAGCCAAC
CGACGCTCCGCTGCGCCTAGGGCAGTATCTTTCGTCATCGTTCGGCAGCT
CACCCGGCCTCGTAGGAAAATCACAGGATGGTGAAGGTGAAGGTGATGGT
GATGACACGGTGGCCGCAGCGCACCTCATGATGGGTCCTTCGGCCAGAGG
GACTGGCAGGGTGATCACAGGCTCTTTCGACAGCTCCGAGATGCTCTGGG
AAGCTGGGGGGGTCGGAAAAAAGTTGAAGACTGACATCATCGATATCACG
CAGAGGAAGACTTCATGGAAGCACTTGCCGTACGATATTCCCACGAAGGA
CTCTCCGCCTGTTACGACTGCAACCATGAGCGTGAAGAAAGGTCAGCTGA
TTGTCGAGACCACCTACGCCATGGCGATCGGAACGTACACGCGAGTCACC
TACAGGTCTCCCGCCCCTCGCGGCTGGTGGTCCAGGTCCACAGTAGTGGG
GAACGAGTTGAAGCCAACCGACGCTCCGCTGCGCCTAGGGCAGTATCTTT
CGTCATCGTTCGGCAGCTCACCCGGCCTCGTAGGAAAATCACAGGATGGT
GAAGGTGAAGGTGATGGTGATGACACGGTGGCCGCAGCGCACCTCATGAT
GGGTCCTTCGGCCAGAGGGACTGGCAGGGTGATCACAGGCTCTTTCGACA
GCTCCGAGATGCTCTGGGAAGCTGGGGGGGTCGGAAAAAAGTTGAAGACT
GACATCATCGATATCACGCAGAGGAAGACTTCATGGAAGCACTTGCCGTA
CGATATTCCCACGAAGGACTCTCCGCCTGTTACGACTGCAACCATGAGCG
TGAAGAAAGGTCAGCTGATTGTCGAGACCACCTACGCCATGGCGATCGGA
ACGTACACGCGAGTCACCTACAGGTCTCCCGCCCCTCGCGGCTGGTGG back to top
|