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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Hypothetical protein |
| Ec32 ortholog | Ec-17_001620.1 |
| Exons | 6 |
| Model size | 1575 |
| Cds size | 1575 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1688.3850.1 >prot_H-paniculata_contig1688.3850.1 ID=prot_H-paniculata_contig1688.3850.1|Name=mRNA_H-paniculata_contig1688.3850.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=525bp
SSGHGEVEDELLLKIAMLRKYQARNVKALSTLRRNTPAKAWEDGPQLCEP
DRVTGSALAGKTPDGPIKKSRSAFETRTAVEAPRKILKARRTVAWICSSV
PSSSKMKLTTVEPFRGMEASTSAWNRKIARQRERAFREKQADKEGKARTR
ERLLTAVNEGTEFTGVITRSNEMMERRRARIAEAEEREEALRRSYEFKAI
PVHITDENWHTIQERQAIRRKQRTELRKAQMASSSHLPSRMERHAHRQSA
KKAADAKNTRDEKNPDHTTSGGIRSVPADQVRKILARKQRRWDQLLAATK
QRKRHIVPQASPMEEREKLYASRRQEKMQRELEKASVARRNQEEEFRRKK
QNALLAPVPIIPRTTHSFLLKTADVRAQLERKRVEAERESEEQARRCARQ
QETSKALAEVMRDLNRQRGTEPRRDKTRNVEQRARESRKKYRQALQENKI
KLENATAYRPTLWERHDAEIRKKEAKRSALSAIAERLFSNGSAGTNDGRW
TEGSAADKIFDEEERVALGIFSRC* back to topmRNA from alignment at H-paniculata_contig1688:2464..5407- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1688.3850.1 ID=mRNA_H-paniculata_contig1688.3850.1|Name=mRNA_H-paniculata_contig1688.3850.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2944bp|location=Sequence derived from alignment at H-paniculata_contig1688:2464..5407- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGTAGCGGGCATGGTGAAGTAGAAGATGAGCTTCTCCTAAAGATCGCAAT
GCTCAGGAAGTACCAAGCGAGGAACGTCAAAGCCCTGAGCACATTGAGAC
GAAACACGCCAGCCAAGGCGTGGGAAGATGGGCCGCAGCTGTGTGAACCT
GATCGTGTCACCGGCTCCGCTCTCGCTGGCAAGACACCTGACGGACCTAT
AAAAAAGAGCCGCAGCGCGTTTGAGACGCGCACAGCTGTTGAAGCACCAC
GAAAAATTCTGAAGGCTCGGCGTACTGTCGCATGGATTTGCTCCTCCGTA
CCAAGCTCTTCGAAAATGAAGCTGACTACAGTGGAACCCTTTCGCGGCAT
GGAAGCAAGTACAAGTGCGTGGAACCGGAAAATCGCACGACAGCGGGAGG
TATAAGTCTTCTACTAAGATGCATACAAATGTCAAGTTTTTAGGTTATGA
AAAATAAATATCTTACAAATTGTAAATCGTTGGATACTACCGTTGGTTGC
TACTCTTGGTTCATCCATCTATCCATCCTGCAGCGAGCCTTTCGCGAGAA
GCAGGCAGACAAGGAAGGCAAGGCCAGGACTCGTGAGCGCTTACTGACAG
CCGTCAACGAAGGGACAGAATTCACTGGAGTGATCACCAGATCAAACGAG
ATGATGGAGCGCCGCCGAGCGAGGATTGTGAGTTGATCTACAGTCCAACA
TTTAGAACGATGATCACCCTCAATTCGCTTAAAAGCATCCGCGACGACGA
CCAACTATCGACAATGATGTACCGCCTCTTGGCGGCAATTTTCAATTGGA
ATACGGTCCGAGCAGGCAGAAGCCGAAGAGAGGGAGGAGGCGCTGAGAAG
GAGCTACGAGTTTAAAGCTATACCTGTTCACATTACTGATGAGAATTGGC
ACACCATTCAAGAGAGGCAAGCCATCCGGCGGAAGCAGCGAACCGAATTA
CGCAAAGCGCAGGTGCCGACTGCAGCATTTTAACGTCGGGGTCAATCACT
CTTGAAAAATGACGCTCTCCTGAGTACATCGCCCCCGAAACTTAATGCTT
CATATAGTTTTAGCCTCTAGATTATTTTGGATTGAAGTCGAACCATTGTT
CTACTCGCATGCCACAAGCTGTAAGGTGTACTCCACGGGATCCCTCGTAT
CAACTCTGCATGCCCTTTGGATACAGTACATAGTTCTTCTAATTGATCCA
TGCTATCAGGTTGTCTGGACTCACGACCACGAACGCAGGTCTCTCTACGG
CCATTGTAAAGAACTCTTCCAGCCCCTCTAAGGTTTTAGTCATGATTTTC
TCCCGCGCTTTTACGCTAGAGGCTTTGGGCTATCGTCACAGACACGGATA
CATACCAACCGCGATTTTAATTATTGAACCCTCCCAACGGCTCCCCCTTC
CAGATGGCGTCTTCCTCTCATCTCCCTAGCCGAATGGAAAGGCACGCCCA
TAGGCAAAGTGCGAAAAAGGCCGCAGACGCCAAAAATACGAGGGATGAAA
AGAACCCTGATCATACAACTTCTGGTGGTATTAGGTCTGTCCCAGCGGAC
CAGGTTCGAAAGATATTGGCCAGGAAGCAACGGAGGTGGGATCAACTACT
CGCTGCCACGAAACAGAGGAAGAGACACATAGTTCCCCAGGTGAACTCTC
TCCAGGAGTTATGCTGTTGAGTCGAAGTGCAGAATGTGGTAGGTGCTCTT
CACCCATGTGTTTTATTTGGATAGATAATGTATTCGTCGCGAATGGTGAA
GAACCGATATTGGCTTAAGACGCCACCTCTCCGCGTACTGTTTCGTATGC
TCGGCCAAACAAGTTACGTATTTATCGGCTGCTTGAACAGGTAGAATCAA
TGACAGACATATCACGCTATAGCACTAATCACAGGCATGCCGATATCTCC
AAACTTAACCGCGAAAAACCTCCTCAGGCGATCTAACACCATTTATATAC
TGAGACCTTCTTTCAGTTGTGGATTCTATACACGGCGAGCACATGACTTT
GGTGTAGCCACGACACCTTCGTGGCCATATCTAGCATAGGCAATAGTTAA
ACATCTCAAATCACGGTTGCTCCAGGCATCGCCCATGGAGGAGCGGGAGA
AACTCTACGCTAGTCGAAGACAGGAAAAAATGCAGAGGGAACTAGAAAAG
GCTTCGGTAGCCCGACGCAACCAAGAGGAGGAATTTCGTCGAAAGAAACA
AAATGCATTATTAGCCCCAGTACCAATTATACCTCGCACAACCCATAGCT
TTCTACTGAAGACAGCCGATGTACGAGCCCAGCTGGAGCGTAAGCGGGTT
GAGGCCGAACGGGAAAGCGAGGAACAAGCTAGGCGCTGCGCCCGACAGCA
AGAAACAAGCAAAGCACTCGCTGAAGTCATGAGGGATCTGAACCGCCAGC
GGGGAACAGAGCCTCGCCGGGACAAAACACGCAATGTGGAGCAGAGAGCT
CGGGAATCTCGCAAGAAATATCGCCAGGCATTGCAAGAAAACAAGATCAA
GCTGGAAAATGTATGTATCGGGTGTAAAAATCGGATGCTCGATAGCGCGT
GAAACACCGAGTGTATAGTTACATATTCCCATGATGTCAAACCTGCCAAC
AGCAGTTGATTTCTTCGAGTTGCAACAGGGGATTTTGATACAGTATGCTT
GGGAAGGGGTGAGGCATATCTCAAAGTAAAGCTTATTCCGACGGGGGTTA
TCTGATCATATGTCCATGTATCGTTAAACAGGCAACGGCATACCGCCCTA
CTCTATGGGAGCGTCACGACGCCGAGATTCGAAAGAAAGAGGCGAAGCGA
AGCGCACTTTCTGCAATTGCGGAACGGTTGTTCAGCAACGGTTCTGCTGG
TACTAACGACGGACGGTGGACAGAGGGGTCTGCGGCAGACAAGATATTTG
ATGAAGAAGAAAGGGTTGCGTTGGGAATTTTTTCGCGGTGTTAG back to topCoding sequence (CDS) from alignment at H-paniculata_contig1688:2464..5407- >mRNA_H-paniculata_contig1688.3850.1 ID=mRNA_H-paniculata_contig1688.3850.1|Name=mRNA_H-paniculata_contig1688.3850.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3150bp|location=Sequence derived from alignment at H-paniculata_contig1688:2464..5407- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGTAGCGGGCATGGTGAAGTAGAAGATGAGCTTCTCCTAAAGATCGCAAT
GCTCAGGAAGTACCAAGCGAGGAACGTCAAAGCCCTGAGCACATTGAGAC
GAAACACGCCAGCCAAGGCGTGGGAAGATGGGCCGCAGCTGTGTGAACCT
GATCGTGTCACCGGCTCCGCTCTCGCTGGCAAGACACCTGACGGACCTAT
AAAAAAGAGCCGCAGCGCGTTTGAGACGCGCACAGCTGTTGAAGCACCAC
GAAAAATTCTGAAGGCTCGGCGTACTGTCGCATGGATTTGCTCCTCCGTA
CCAAGCTCTTCGAAAATGAAGCTGACTACAGTGGAACCCTTTCGCGGCAT
GGAAGCAAGTACAAGTGCGTGGAACCGGAAAATCGCACGACAGCGGGAGA
GTAGCGGGCATGGTGAAGTAGAAGATGAGCTTCTCCTAAAGATCGCAATG
CTCAGGAAGTACCAAGCGAGGAACGTCAAAGCCCTGAGCACATTGAGACG
AAACACGCCAGCCAAGGCGTGGGAAGATGGGCCGCAGCTGTGTGAACCTG
ATCGTGTCACCGGCTCCGCTCTCGCTGGCAAGACACCTGACGGACCTATA
AAAAAGAGCCGCAGCGCGTTTGAGACGCGCACAGCTGTTGAAGCACCACG
AAAAATTCTGAAGGCTCGGCGTACTGTCGCATGGATTTGCTCCTCCGTAC
CAAGCTCTTCGAAAATGAAGCTGACTACAGTGGAACCCTTTCGCGGCATG
GAAGCAAGTACAAGTGCGTGGAACCGGAAAATCGCACGACAGCGGGAGCG
AGCCTTTCGCGAGAAGCAGGCAGACAAGGAAGGCAAGGCCAGGACTCGTG
AGCGCTTACTGACAGCCGTCAACGAAGGGACAGAATTCACTGGAGTGATC
ACCAGATCAAACGAGATGATGGAGCGCCGCCGAGCGAGGATTCGAGCCTT
TCGCGAGAAGCAGGCAGACAAGGAAGGCAAGGCCAGGACTCGTGAGCGCT
TACTGACAGCCGTCAACGAAGGGACAGAATTCACTGGAGTGATCACCAGA
TCAAACGAGATGATGGAGCGCCGCCGAGCGAGGATTGCAGAAGCCGAAGA
GAGGGAGGAGGCGCTGAGAAGGAGCTACGAGTTTAAAGCTATACCTGTTC
ACATTACTGATGAGAATTGGCACACCATTCAAGAGAGGCAAGCCATCCGG
CGGAAGCAGCGAACCGAATTACGCAAAGCGCAGGCAGAAGCCGAAGAGAG
GGAGGAGGCGCTGAGAAGGAGCTACGAGTTTAAAGCTATACCTGTTCACA
TTACTGATGAGAATTGGCACACCATTCAAGAGAGGCAAGCCATCCGGCGG
AAGCAGCGAACCGAATTACGCAAAGCGCAGATGGCGTCTTCCTCTCATCT
CCCTAGCCGAATGGAAAGGCACGCCCATAGGCAAAGTGCGAAAAAGGCCG
CAGACGCCAAAAATACGAGGGATGAAAAGAACCCTGATCATACAACTTCT
GGTGGTATTAGGTCTGTCCCAGCGGACCAGGTTCGAAAGATATTGGCCAG
GAAGCAACGGAGGTGGGATCAACTACTCGCTGCCACGAAACAGAGGAAGA
GACACATAGTTCCCCAGATGGCGTCTTCCTCTCATCTCCCTAGCCGAATG
GAAAGGCACGCCCATAGGCAAAGTGCGAAAAAGGCCGCAGACGCCAAAAA
TACGAGGGATGAAAAGAACCCTGATCATACAACTTCTGGTGGTATTAGGT
CTGTCCCAGCGGACCAGGTTCGAAAGATATTGGCCAGGAAGCAACGGAGG
TGGGATCAACTACTCGCTGCCACGAAACAGAGGAAGAGACACATAGTTCC
CCAGGCATCGCCCATGGAGGAGCGGGAGAAACTCTACGCTAGTCGAAGAC
AGGAAAAAATGCAGAGGGAACTAGAAAAGGCTTCGGTAGCCCGACGCAAC
CAAGAGGAGGAATTTCGTCGAAAGAAACAAAATGCATTATTAGCCCCAGT
ACCAATTATACCTCGCACAACCCATAGCTTTCTACTGAAGACAGCCGATG
TACGAGCCCAGCTGGAGCGTAAGCGGGTTGAGGCCGAACGGGAAAGCGAG
GAACAAGCTAGGCGCTGCGCCCGACAGCAAGAAACAAGCAAAGCACTCGC
TGAAGTCATGAGGGATCTGAACCGCCAGCGGGGAACAGAGCCTCGCCGGG
ACAAAACACGCAATGTGGAGCAGAGAGCTCGGGAATCTCGCAAGAAATAT
CGCCAGGCATTGCAAGAAAACAAGATCAAGCTGGAAAATGCATCGCCCAT
GGAGGAGCGGGAGAAACTCTACGCTAGTCGAAGACAGGAAAAAATGCAGA
GGGAACTAGAAAAGGCTTCGGTAGCCCGACGCAACCAAGAGGAGGAATTT
CGTCGAAAGAAACAAAATGCATTATTAGCCCCAGTACCAATTATACCTCG
CACAACCCATAGCTTTCTACTGAAGACAGCCGATGTACGAGCCCAGCTGG
AGCGTAAGCGGGTTGAGGCCGAACGGGAAAGCGAGGAACAAGCTAGGCGC
TGCGCCCGACAGCAAGAAACAAGCAAAGCACTCGCTGAAGTCATGAGGGA
TCTGAACCGCCAGCGGGGAACAGAGCCTCGCCGGGACAAAACACGCAATG
TGGAGCAGAGAGCTCGGGAATCTCGCAAGAAATATCGCCAGGCATTGCAA
GAAAACAAGATCAAGCTGGAAAATGCAACGGCATACCGCCCTACTCTATG
GGAGCGTCACGACGCCGAGATTCGAAAGAAAGAGGCGAAGCGAAGCGCAC
TTTCTGCAATTGCGGAACGGTTGTTCAGCAACGGTTCTGCTGGTACTAAC
GACGGACGGTGGACAGAGGGGTCTGCGGCAGACAAGATATTTGATGAAGA
AGAAAGGGTTGCGTTGGGAATTTTTTCGCGGTGTTAGGCAACGGCATACC
GCCCTACTCTATGGGAGCGTCACGACGCCGAGATTCGAAAGAAAGAGGCG
AAGCGAAGCGCACTTTCTGCAATTGCGGAACGGTTGTTCAGCAACGGTTC
TGCTGGTACTAACGACGGACGGTGGACAGAGGGGTCTGCGGCAGACAAGA
TATTTGATGAAGAAGAAAGGGTTGCGTTGGGAATTTTTTCGCGGTGTTAG back to top
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