mRNA_H-paniculata_contig16757.3809.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig16757.3809.1 vs. uniprot
Match: D7FKE3_ECTSI (Wheel domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKE3_ECTSI) HSP 1 Score: 238 bits (608), Expect = 1.450e-74 Identity = 120/158 (75.95%), Postives = 137/158 (86.71%), Query Frame = 1
Query: 7 KKKCEKALRAAEEAAAAMNRDKEERLERLAAVWDACESVGLKLGPSAFDETHHEKRNSFLPLADDE----GQVSWPVLLLYPQYGQSDLIQVFRHQDLLAEQLAAAFPEEGPPAPWDESFEYRCSELEIYLPLRTVEPSTSVFEWVAEFEDMEASKAA 468
KK+C +AL+AAE+A AA+NR+KEERLERLAAVWD CE+ G+KLGPS FDE++HE+RN+FLP+ADDE G V WPVLLLYPQYGQSDLIQ FR D+LAE LAAAFPEEGPPAPWD SFEYRCSEL IYLPLR VEPS SVF+WVAEFE MEA+K +
Sbjct: 204 KKECGRALKAAEDATAALNREKEERLERLAAVWDECEAAGVKLGPSGFDESNHEQRNAFLPMADDEHGDKGGVIWPVLLLYPQYGQSDLIQAFRDADMLAEHLAAAFPEEGPPAPWDTSFEYRCSELVIYLPLRPVEPSPSVFDWVAEFEKMEAAKVS 361
BLAST of mRNA_H-paniculata_contig16757.3809.1 vs. uniprot
Match: A0A835Z6T6_9STRA (Wheel domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6T6_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 7.770e-18 Identity = 45/99 (45.45%), Postives = 59/99 (59.60%), Query Frame = 1
Query: 109 ACESVGLKLGPSAFDETHHEKRNSFLPLAD---DEGQVSWPVLLLYPQYGQSDLIQVFRHQDLLAEQLAAAFPEEGPPAPWDES-FEYRCSELEIYLPL 393
A + G+ LGPSAFD +H + P D D ++ WP+LLLYP GQSD+++ +D + LA FPE GPP PWD + +EYRCS LE Y L
Sbjct: 286 AAAARGVALGPSAFDASHAHFGSDLAPTPDPDSDSSELLWPLLLLYPANGQSDVVRSVAERDTVGAHLAVVFPEGGPPPPWDAAAYEYRCSRLEAYARL 384
BLAST of mRNA_H-paniculata_contig16757.3809.1 vs. uniprot
Match: A0A8K1CVK3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CVK3_PYTOL) HSP 1 Score: 84.7 bits (208), Expect = 3.310e-16 Identity = 43/106 (40.57%), Postives = 55/106 (51.89%), Query Frame = 1
Query: 112 CESVGLKLGPSAFDETHHEKRNSFLPLADDEGQVSWPVLLLYPQYGQSDLIQVFRHQDLLAEQLAAAFPEEGPPAPWDESFEYRCSELEIYLPLRTVEPSTSVFEW 429
CE +K+G + D+ ++ L + GQ+ WPVL+LY +YG SD IQVF D E LA FPE+GP WD EY S L +Y V P S EW
Sbjct: 224 CEVRQVKVGRALIDDERVKQYEGKADLDSESGQLCWPVLMLYDEYGTSDFIQVFAENDAFIEHLANMFPEDGPFCEWDAKHEYVASRLVVYAAAEIVLPFESTEEW 329
BLAST of mRNA_H-paniculata_contig16757.3809.1 vs. uniprot
Match: A0A024U045_9STRA (Wheel domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U045_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 1.960e-14 Identity = 43/119 (36.13%), Postives = 62/119 (52.10%), Query Frame = 1
Query: 112 CESVGLKLGPSAFDETHHEKRNSFLPLADDEGQVSWPVLLLYPQYGQSDLIQVFRHQDLLAEQLAAAFPEEGPPAPWDESFEYRCSELEIYLPLRTVEPSTSVFEW-VAEFEDMEASKA 465
C +++GP+ + L D G ++WPVL LY +YGQSD IQ F D++ E LA FPE+GP WD +Y+ S+L +Y+ V P + W VA D+E+ A
Sbjct: 64 CTLRKVRVGPAIISDRRVADFQGKADLNPDSGNMAWPVLFLYDEYGQSDFIQAFDEHDMVVEHLANMFPEDGPFCMWDTRCDYKASQLVLYVVADAVLPFATDDAWHVALSGDVESDVA 182
BLAST of mRNA_H-paniculata_contig16757.3809.1 vs. uniprot
Match: A0A6A5A414_9STRA (Wheel domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5A414_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 4.680e-14 Identity = 39/106 (36.79%), Postives = 53/106 (50.00%), Query Frame = 1
Query: 112 CESVGLKLGPSAFDETHHEKRNSFLPLADDEGQVSWPVLLLYPQYGQSDLIQVFRHQDLLAEQLAAAFPEEGPPAPWDESFEYRCSELEIYLPLRTVEPSTSVFEW 429
C +++GP+ + L D G ++WPVL LY +YGQSD IQ F QD+ E LA FPEEG WD +Y+ S+L +Y V P + W
Sbjct: 108 CNLRHVRVGPAVISDRRVTDFEGKADLNPDTGNLAWPVLFLYDEYGQSDFIQQFDEQDMFVEHLANMFPEEGALCMWDARGDYKASQLVVYAVANVVVPFATDDAW 213
BLAST of mRNA_H-paniculata_contig16757.3809.1 vs. uniprot
Match: W4G1Q5_9STRA (Wheel domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G1Q5_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 1.350e-13 Identity = 39/106 (36.79%), Postives = 53/106 (50.00%), Query Frame = 1
Query: 112 CESVGLKLGPSAFDETHHEKRNSFLPLADDEGQVSWPVLLLYPQYGQSDLIQVFRHQDLLAEQLAAAFPEEGPPAPWDESFEYRCSELEIYLPLRTVEPSTSVFEW 429
C +++GP+ + L D G ++WPVL LY +YGQSD IQ F QD+ E LA FPEEG WD +Y+ S+L +Y V P + W
Sbjct: 234 CNLRHVRVGPAVISDRRVTDFEGKADLNPDTGNLAWPVLFLYDEYGQSDFIQQFDDQDMFVEHLANMFPEEGALCMWDARGDYKASQLVVYAVANVVVPFVTDDAW 339
BLAST of mRNA_H-paniculata_contig16757.3809.1 vs. uniprot
Match: A0A418AZ57_9STRA (Wheel domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418AZ57_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 1.350e-13 Identity = 43/119 (36.13%), Postives = 62/119 (52.10%), Query Frame = 1
Query: 112 CESVGLKLGPSAFDETHHEKRNSFLPLADDEGQVSWPVLLLYPQYGQSDLIQVFRHQDLLAEQLAAAFPEEGPPAPWDESFEYRCSELEIYLPLRTVEPSTSVFEW-VAEFEDMEASKA 465
C +++GP+ + L D G ++WPVL LY +YGQSD IQ F D++ E LA FPE+GP WD +Y+ S+L +Y+ V P + W VA D+E+ A
Sbjct: 234 CTLRKVRVGPAIISDRRVADFQGKADLNPDSGNMAWPVLFLYDEYGQSDFIQSFDEHDMVVEHLANMFPEDGPFCMWDTRCDYKASQLVLYVVADAVLPFATDDAWHVALSGDVESDVA 352
BLAST of mRNA_H-paniculata_contig16757.3809.1 vs. uniprot
Match: A0A7S2XZ49_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZ49_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 6.030e-13 Identity = 44/108 (40.74%), Postives = 58/108 (53.70%), Query Frame = 1
Query: 100 VWDACESVGLKLGPSAFDE--THHEKRNSFLPLADD----EGQV-----SWPVLLLYPQYGQSDLIQVFRHQDLLAEQLAAAFPE--EGPPAPWDESFEYRCSELEIY 384
VW+ C +KLGP F T H +P D+ EGQ+ SWPV+ +YP++ QSDLIQ F D++A LA PE EG PWD +Y CS +E+Y
Sbjct: 44 VWEHCAKRSIKLGPCLFQGGGTSHG-----IPGPDEDSSNEGQMDADSWSWPVVFVYPEHRQSDLIQCFGEDDMVAPYLAQMLPEPGEGERPPWDRRGDYVCSNVEVY 146
BLAST of mRNA_H-paniculata_contig16757.3809.1 vs. uniprot
Match: A0A7S1C5P0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C5P0_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 6.650e-11 Identity = 35/95 (36.84%), Postives = 48/95 (50.53%), Query Frame = 1
Query: 118 SVGLKLGPSAFDETHHEKRNSFLPLADDEGQVSWPVLLLYPQYGQSDLIQVFRHQDLLAEQLAAAFPEEGPPAPWDESFEYRCSELEIYLPLRTV 402
S G+++GP F P D+ G + WPV+LLYP+ G+SD I F AE LA PE G P WD + YR S ++++ R V
Sbjct: 2 SRGVQVGPPMFTSFRAYDAE---PHVDEAGCMHWPVVLLYPESGESDFIADFAEVSTFAEHLAVVLPEVGRPPAWDAAGRYRASNVDVFWQERVV 93
BLAST of mRNA_H-paniculata_contig16757.3809.1 vs. uniprot
Match: A0A8J4XLF7_CHIOP (Tetratricopeptide repeat protein 4 n=1 Tax=Chionoecetes opilio TaxID=41210 RepID=A0A8J4XLF7_CHIOP) HSP 1 Score: 68.6 bits (166), Expect = 1.580e-10 Identity = 36/112 (32.14%), Postives = 54/112 (48.21%), Query Frame = 1
Query: 100 VWDACESVGLKLGPSAFD----------ETHHEKRNSFLPLADDEGQVSWPVLLLYPQYGQSDLIQVFRHQDLLAEQLAAAFPEEGPPAPWDESFEYRCSELEIYLPLRTVE 405
V +S G++LG S E+HH G++ WPV+L+YP+Y +SD IQ F D ++ L F + PPAPWD +YR +L+++ R E
Sbjct: 251 VLSVIKSRGVRLGASHIKGSSTITLEDLESHHPAAQGSRVHLSHSGELVWPVMLVYPEYQESDFIQEFTESDYFSDHLEVMFGADLPPAPWDAEHKYRLRDLQVFFEDRAKE 362 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16757.3809.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig16757.3809.1 >prot_H-paniculata_contig16757.3809.1 ID=prot_H-paniculata_contig16757.3809.1|Name=mRNA_H-paniculata_contig16757.3809.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=165bp KKKKKCEKALRAAEEAAAAMNRDKEERLERLAAVWDACESVGLKLGPSAFback to top mRNA from alignment at H-paniculata_contig16757:267..4776+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig16757.3809.1 ID=mRNA_H-paniculata_contig16757.3809.1|Name=mRNA_H-paniculata_contig16757.3809.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4510bp|location=Sequence derived from alignment at H-paniculata_contig16757:267..4776+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig16757:267..4776+ >mRNA_H-paniculata_contig16757.3809.1 ID=mRNA_H-paniculata_contig16757.3809.1|Name=mRNA_H-paniculata_contig16757.3809.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=990bp|location=Sequence derived from alignment at H-paniculata_contig16757:267..4776+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |