mRNA_H-paniculata_contig16755.3807.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig16755.3807.1 vs. uniprot
Match: A0A835YSG5_9STRA (U2 snRNP protein Rds3p n=2 Tax=Eukaryota TaxID=2759 RepID=A0A835YSG5_9STRA) HSP 1 Score: 212 bits (539), Expect = 1.030e-69 Identity = 93/96 (96.88%), Postives = 94/96 (97.92%), Query Frame = 1
Query: 1 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYEGRCTICGGPGISDAYYCRECTQQEKDRDGCPKIVNLGSSKT 288
MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCV+CDSYVRPCTLVRICDECNYGSYEGRC ICGG GISDAYYCRECTQQEKDRDGCPKIVNLGSSKT
Sbjct: 1 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSYEGRCVICGGVGISDAYYCRECTQQEKDRDGCPKIVNLGSSKT 96
BLAST of mRNA_H-paniculata_contig16755.3807.1 vs. uniprot
Match: A0A7S0HIU9_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HIU9_9EUKA) HSP 1 Score: 211 bits (538), Expect = 4.020e-69 Identity = 91/96 (94.79%), Postives = 94/96 (97.92%), Query Frame = 1
Query: 1 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYEGRCTICGGPGISDAYYCRECTQQEKDRDGCPKIVNLGSSKT 288
MAKHHPDL+MCRKQPGIA+GRLCEKCDGKC ICDSYVRPCTLVRICDECNYGSYEGRC ICGGPGISDAYYC+ECTQQEKDRDGCPKIVNLGSSKT
Sbjct: 32 MAKHHPDLIMCRKQPGIAVGRLCEKCDGKCPICDSYVRPCTLVRICDECNYGSYEGRCVICGGPGISDAYYCKECTQQEKDRDGCPKIVNLGSSKT 127
BLAST of mRNA_H-paniculata_contig16755.3807.1 vs. uniprot
Match: A0A022QQC9_ERYGU (Uncharacterized protein n=5 Tax=Eukaryota TaxID=2759 RepID=A0A022QQC9_ERYGU) HSP 1 Score: 210 bits (534), Expect = 5.950e-69 Identity = 89/96 (92.71%), Postives = 95/96 (98.96%), Query Frame = 1
Query: 1 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYEGRCTICGGPGISDAYYCRECTQQEKDRDGCPKIVNLGSSKT 288
MAKHHPDL+MCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVR+CDECNYGS++GRC ICGGPGISDAYYC+ECTQQEKDRDGCPKIVNLGS+KT
Sbjct: 1 MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGPGISDAYYCKECTQQEKDRDGCPKIVNLGSAKT 96
BLAST of mRNA_H-paniculata_contig16755.3807.1 vs. uniprot
Match: B3S8G1_TRIAD (Uncharacterized protein n=44 Tax=Eumetazoa TaxID=6072 RepID=B3S8G1_TRIAD) HSP 1 Score: 209 bits (533), Expect = 8.460e-69 Identity = 90/96 (93.75%), Postives = 94/96 (97.92%), Query Frame = 1
Query: 1 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYEGRCTICGGPGISDAYYCRECTQQEKDRDGCPKIVNLGSSKT 288
MAKHHPDL+MCRKQPG+AIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSY+GRC ICGGPGISDAYYC+ECT QEKDRDGCPKIVNLGSSKT
Sbjct: 1 MAKHHPDLIMCRKQPGVAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGISDAYYCKECTIQEKDRDGCPKIVNLGSSKT 96
BLAST of mRNA_H-paniculata_contig16755.3807.1 vs. uniprot
Match: A7SWK0_NEMVE (Predicted protein n=5 Tax=Eumetazoa TaxID=6072 RepID=A7SWK0_NEMVE) HSP 1 Score: 209 bits (533), Expect = 8.460e-69 Identity = 89/96 (92.71%), Postives = 94/96 (97.92%), Query Frame = 1
Query: 1 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYEGRCTICGGPGISDAYYCRECTQQEKDRDGCPKIVNLGSSKT 288
MAKHHPDL+MCRKQPG+AIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSY+GRC ICGGPG+SDAYYC+ECT QEKDRDGCPKIVNLGSSKT
Sbjct: 1 MAKHHPDLIMCRKQPGVAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKECTVQEKDRDGCPKIVNLGSSKT 96
BLAST of mRNA_H-paniculata_contig16755.3807.1 vs. uniprot
Match: A0A7S2RJG3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJG3_9STRA) HSP 1 Score: 209 bits (533), Expect = 8.460e-69 Identity = 92/96 (95.83%), Postives = 93/96 (96.88%), Query Frame = 1
Query: 1 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYEGRCTICGGPGISDAYYCRECTQQEKDRDGCPKIVNLGSSKT 288
MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVICDSYVRP TLVRICDECNYGSYEGRC ICGGPGISDAYYCREC QQEKDRDGCPKI+NLGSSKT
Sbjct: 1 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVICDSYVRPATLVRICDECNYGSYEGRCVICGGPGISDAYYCRECCQQEKDRDGCPKIINLGSSKT 96
BLAST of mRNA_H-paniculata_contig16755.3807.1 vs. uniprot
Match: A0A7S4BG74_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BG74_CHRCT) HSP 1 Score: 210 bits (534), Expect = 2.270e-68 Identity = 90/96 (93.75%), Postives = 94/96 (97.92%), Query Frame = 1
Query: 1 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYEGRCTICGGPGISDAYYCRECTQQEKDRDGCPKIVNLGSSKT 288
MAKHHPDL+MCRKQPGIA+GRLCEKCDGKC ICDSYVRPCTLVRICDECNYGSY+GRC ICGGPGISDAYYC+ECTQQEKDRDGCPKIVNLGSSKT
Sbjct: 6 MAKHHPDLIMCRKQPGIAVGRLCEKCDGKCPICDSYVRPCTLVRICDECNYGSYQGRCIICGGPGISDAYYCKECTQQEKDRDGCPKIVNLGSSKT 101
BLAST of mRNA_H-paniculata_contig16755.3807.1 vs. uniprot
Match: A0A212FIF1_DANPL (PHD finger-like domain-containing protein 5A n=3 Tax=Obtectomera TaxID=104431 RepID=A0A212FIF1_DANPL) HSP 1 Score: 208 bits (529), Expect = 3.450e-68 Identity = 88/96 (91.67%), Postives = 93/96 (96.88%), Query Frame = 1
Query: 1 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYEGRCTICGGPGISDAYYCRECTQQEKDRDGCPKIVNLGSSKT 288
MAKHHPDL+ CRKQPG+AIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSY+GRC ICGGPG+SDAYYC+ECT QEKDRDGCPKIVNLGSSKT
Sbjct: 1 MAKHHPDLIFCRKQPGVAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKECTTQEKDRDGCPKIVNLGSSKT 96
BLAST of mRNA_H-paniculata_contig16755.3807.1 vs. uniprot
Match: A0A7S2HSQ3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HSQ3_9STRA) HSP 1 Score: 207 bits (528), Expect = 4.900e-68 Identity = 92/96 (95.83%), Postives = 93/96 (96.88%), Query Frame = 1
Query: 1 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYEGRCTICGGPGISDAYYCRECTQQEKDRDGCPKIVNLGSSKT 288
MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVICDSYVRP LVRICDECNYGSYEGRC ICGGPGISDAY+CRECTQQEKDRDGCPKIVNLGSSKT
Sbjct: 1 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVICDSYVRPNVLVRICDECNYGSYEGRCVICGGPGISDAYFCRECTQQEKDRDGCPKIVNLGSSKT 96
BLAST of mRNA_H-paniculata_contig16755.3807.1 vs. uniprot
Match: M4E1W9_BRARP (Uncharacterized protein n=15 Tax=Eukaryota TaxID=2759 RepID=M4E1W9_BRARP) HSP 1 Score: 208 bits (530), Expect = 5.470e-68 Identity = 89/96 (92.71%), Postives = 95/96 (98.96%), Query Frame = 1
Query: 1 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYEGRCTICGGPGISDAYYCRECTQQEKDRDGCPKIVNLGSSKT 288
MAKHHPDL+MCRKQPGIAIGRLCEKCDGKCV+CDSYVRPCTLVRICDECNYGS++GRCTICGG GISDAYYC+ECTQQEKDRDGCPKIVNLGS+KT
Sbjct: 26 MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSFQGRCTICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKT 121 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16755.3807.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig16755.3807.1 >prot_H-paniculata_contig16755.3807.1 ID=prot_H-paniculata_contig16755.3807.1|Name=mRNA_H-paniculata_contig16755.3807.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=96bp MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNback to top mRNA from alignment at H-paniculata_contig16755:895..4929+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig16755.3807.1 ID=mRNA_H-paniculata_contig16755.3807.1|Name=mRNA_H-paniculata_contig16755.3807.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4035bp|location=Sequence derived from alignment at H-paniculata_contig16755:895..4929+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig16755:895..4929+ >mRNA_H-paniculata_contig16755.3807.1 ID=mRNA_H-paniculata_contig16755.3807.1|Name=mRNA_H-paniculata_contig16755.3807.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=576bp|location=Sequence derived from alignment at H-paniculata_contig16755:895..4929+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |