mRNA_H-paniculata_contig16734.3800.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig16734.3800.1
Unique NamemRNA_H-paniculata_contig16734.3800.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig16734.3800.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE)

HSP 1 Score: 143 bits (360), Expect = 6.170e-36
Identity = 78/201 (38.81%), Postives = 126/201 (62.69%), Query Frame = 1 
Query:    1 LIALDCTNAFNSVERAAILKEVPIRTPGLTPFVAKCYGEKPADIIFQMDTGERLKISSNTGIHQSDGMGPALFSM-------PCREQFEALGVELLAYLDDLVLAMGELTGENLRAIHFLVQELARIGVQINNAKTKVVPPMNHIPTEREVAALAAMGISVAEGRGAVVVGTPMGP-TISRSASRRHSSQGKGAEHLARLL 579
            +I  DC+NAFN+ +R AI+ +     P L  ++A+CY E PA  +++MD+GER  +   +G+ Q DGMGP LFS+         +++++ LGV   AY+DD+ L + +LT E+++A+  LV ELA +G+ +N AK+  +PP  H+ T+++   L  +G++VA G G  VVG P+G     R  + +  ++G GAE LAR+L
Sbjct:  677 IIQTDCSNAFNTGKRTAIMAQAAKSLPDLVGYIARCYDEIPATAVYEMDSGERRTLECTSGVQQGDGMGPPLFSLILIPIILKLQDKYKPLGVAFKAYMDDITLHLKDLTEESVQAMTDLVDELAEVGIVVNRAKSSALPPPGHMITDQQRRLLEGVGLTVA-GEGITVVGVPIGTDNYVREFAMKVITEG-GAEKLARML 875
[Close]
BLAST of mRNA_H-paniculata_contig16734.3800.1 vs. uniprot
Match: A0A6H5KDD0_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDD0_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 1.730e-32
Identity = 76/204 (37.25%), Postives = 114/204 (55.88%), Query Frame = 1 
Query:    1 LIALDCTNAFNSVERAAILKEVPIRTPGLTPFVAKCYGEKPADIIFQMDTGERLKISSNTGIHQSDGMGPALFS-------MPCREQFEALGVELLAYLDDLVLAMGELTGENLRAIHFLVQELARIGVQINNAKTKVVPPMNHIPTEREVAALAAMGISVAEGRGAVVVGTPMGP-TISRSASRRHSSQGKGAEHLARLLAHI 588
            ++  DC+NAFN+ +R AI+ +     P L  ++A+CY E  A  I+ MD+GER  I   +G+ Q DGMGP LF        +  R +++ LGV L AY+DD+ L    +T EN++ I  LV EL  +G+ +N  K+  +PP  H  T  E   L   G+ +AE  G  VVG P+G        + +  ++G GA+ LAR+L H+
Sbjct:   95 VVQTDCSNAFNTGKRTAIMAKAAKSVPNLVGYIARCYDEISAKSIYAMDSGERRTIECKSGVQQGDGMGPPLFFFILFPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAE-EGITVVGVPIGTDAYVEDIAMKVLTEG-GADKLARMLVHM 296
[Close]
BLAST of mRNA_H-paniculata_contig16734.3800.1 vs. uniprot
Match: A0A6H5KKQ2_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKQ2_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 1.030e-31
Identity = 77/201 (38.31%), Postives = 113/201 (56.22%), Query Frame = 1 
Query:    1 LIALDCTNAFNSVERAAILKEVPIRTPGLTPFVAKCYGEKPADIIFQMDTGERLKISSNTGIHQSDGMGPALFS-------MPCREQFEALGVELLAYLDDLVLAMGELTGENLRAIHFLVQELARIGVQINNAKTKVVPPMNHIPTEREVAALAAMGISVAEGRGAVVVGTPMGP-TISRSASRRHSSQGKGAEHLARLL 579
            ++  DC+NAFN+ +R AI+ +     P L  ++A+CY E PA  I+ MD+GER  I   +G+ Q DGMGP LF        +  R +++ LGV L AY+DD+ L   ++T EN++    LV EL  +G+ +N  K+  +PP  H  T  E   L   G+ +AE  G  VVG P+G        + +  ++G GAE LARLL
Sbjct:  506 VVQTDCSNAFNTGKRTAIMAQASKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKDITAENIQVTPDLVDELEAVGIIVNRGKSSALPPPGHDVTPTERRPLGDAGLPIAE-EGITVVGVPIGTDAYVEDIAMKVITEG-GAEKLARLL 704
[Close]
BLAST of mRNA_H-paniculata_contig16734.3800.1 vs. uniprot
Match: A0A6H5KMQ2_9PHAE (Reverse transcriptase domain-containing protein n=16 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ2_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 2.120e-31
Identity = 76/201 (37.81%), Postives = 113/201 (56.22%), Query Frame = 1 
Query:    1 LIALDCTNAFNSVERAAILKEVPIRTPGLTPFVAKCYGEKPADIIFQMDTGERLKISSNTGIHQSDGMGPALFS-------MPCREQFEALGVELLAYLDDLVLAMGELTGENLRAIHFLVQELARIGVQINNAKTKVVPPMNHIPTEREVAALAAMGISVAEGRGAVVVGTPMGP-TISRSASRRHSSQGKGAEHLARLL 579
            ++  DC+NAFN+ +R AI+ +     P L  ++A+CY E PA  I+ MD+GER  I   +G+ Q DGMGP LF        +  R +++ LGV L AY+DD+ L    +T EN++ I  LV EL  +G+ +N  K+  +PP  H  T  E   L   G+ +AE  G  VVG P+G        + +  ++G GA+ LAR+L
Sbjct:  507 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAE-EGITVVGVPIGTDAYVEDIAMKVITEG-GADKLARML 705
[Close]
BLAST of mRNA_H-paniculata_contig16734.3800.1 vs. uniprot
Match: A0A6H5JLG6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLG6_9PHAE)

HSP 1 Score: 129 bits (324), Expect = 3.770e-31
Identity = 75/201 (37.31%), Postives = 112/201 (55.72%), Query Frame = 1 
Query:    1 LIALDCTNAFNSVERAAILKEVPIRTPGLTPFVAKCYGEKPADIIFQMDTGERLKISSNTGIHQSDGMGPALFSM-------PCREQFEALGVELLAYLDDLVLAMGELTGENLRAIHFLVQELARIGVQINNAKTKVVPPMNHIPTEREVAALAAMGISVAEGRGAVVVGTPMGP-TISRSASRRHSSQGKGAEHLARLL 579
            ++  DC+NAFN+ +R AI+ +     P L  ++A+CY E PA  I+ MD+GER  I   +G+ Q DGMGP LF           R +++ LGV L AY+DD+ L    +T EN++ I  LV EL  +G+ +N  K+  +PP  H  T  E   L   G+ +AE  G  VVG P+G        + +  ++G GA+ LAR++
Sbjct:  146 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVSKVRAKYDHLGVSLKAYVDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAE-EGITVVGVPIGTDAYVEDIAMKVITEG-GADKLARMV 344
[Close]
BLAST of mRNA_H-paniculata_contig16734.3800.1 vs. uniprot
Match: A0A6H5LL14_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL14_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 3.990e-31
Identity = 76/202 (37.62%), Postives = 114/202 (56.44%), Query Frame = 1 
Query:    1 LIALDCTNAFNSVERAAILKEVPIRTPGLTPFVAKCYGEKPADIIFQMDTGERLKISSNTGIHQSDGMGPALFS-------MPCREQFEALGVELLAYLDDLV-LAMGELTGENLRAIHFLVQELARIGVQINNAKTKVVPPMNHIPTEREVAALAAMGISVAEGRGAVVVGTPMGP-TISRSASRRHSSQGKGAEHLARLL 579
            ++  DC+NAFN+ +R AI+ +     P L  ++A+CY E PA  I+ MD+GER  I   +G+ Q DGMGP LF        +  R +++ LGV L AY+DD++ L    +T EN++ I  LV EL  +G+ +N  K+  +PP  H  T  E   L   G+ +AE  G  VVG P+G        + +  ++G GA+ LAR+L
Sbjct:  138 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFTLVPIVLKLRAKYDNLGVRLKAYMDDIISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAE-EGITVVGVPIGTDAYVEDIAMKVITEG-GADKLARML 337
[Close]
BLAST of mRNA_H-paniculata_contig16734.3800.1 vs. uniprot
Match: A0A6H5KYJ9_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYJ9_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 4.410e-31
Identity = 75/201 (37.31%), Postives = 113/201 (56.22%), Query Frame = 1 
Query:    1 LIALDCTNAFNSVERAAILKEVPIRTPGLTPFVAKCYGEKPADIIFQMDTGERLKISSNTGIHQSDGMGPALFS-------MPCREQFEALGVELLAYLDDLVLAMGELTGENLRAIHFLVQELARIGVQINNAKTKVVPPMNHIPTEREVAALAAMGISVAEGRGAVVVGTPMGP-TISRSASRRHSSQGKGAEHLARLL 579
            ++  DC+NAFN+ +R AI+ +     P L  ++A+CY E PA  I+ MD+GER  I   +G+ Q DGMGP LF        +  R +++ LGV L AY+DD+ L    +T EN++ I  +V EL  +G+ +N  K+  +PP  H  T  E   L   G+ +AE  G  VVG P+G        + +  ++G GA+ LAR+L
Sbjct:   54 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDVVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAE-EGITVVGVPIGTDAYVEDIAMKVITEG-GADKLARML 252
[Close]
BLAST of mRNA_H-paniculata_contig16734.3800.1 vs. uniprot
Match: A0A6H5KR59_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR59_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 4.540e-31
Identity = 75/201 (37.31%), Postives = 111/201 (55.22%), Query Frame = 1 
Query:    1 LIALDCTNAFNSVERAAILKEVPIRTPGLTPFVAKCYGEKPADIIFQMDTGERLKISSNTGIHQSDGMGPALFS-------MPCREQFEALGVELLAYLDDLVLAMGELTGENLRAIHFLVQELARIGVQINNAKTKVVPPMNHIPTEREVAALAAMGISVAEGRGAVVVGTPMGP-TISRSASRRHSSQGKGAEHLARLL 579
            ++  DC+NAFN+ +R AI+ +     P L  ++A+CY E PA  I+ MD+G R  I    G+ Q DGMGP LF        +  R +++ LGV L AY+DD+ L    +T EN++ I  LV EL  +G+ +N  K+  +PP  H  T  E   L   G+ +AE  G  VVG P+G        + +  ++G GA+ LAR+L
Sbjct:  229 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGARRTIECKGGVQQGDGMGPPLFCFILVPIILKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAE-EGITVVGVPIGTDAYVEDIAMKVITEG-GADKLARML 427
[Close]
BLAST of mRNA_H-paniculata_contig16734.3800.1 vs. uniprot
Match: A0A6H5KJC0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJC0_9PHAE)

HSP 1 Score: 125 bits (313), Expect = 1.080e-29
Identity = 74/201 (36.82%), Postives = 111/201 (55.22%), Query Frame = 1 
Query:    1 LIALDCTNAFNSVERAAILKEVPIRTPGLTPFVAKCYGEKPADIIFQMDTGERLKISSNTGIHQSDGMGPALFS-------MPCREQFEALGVELLAYLDDLVLAMGELTGENLRAIHFLVQELARIGVQINNAKTKVVPPMNHIPTEREVAALAAMGISVAEGRGAVVVGTPMGP-TISRSASRRHSSQGKGAEHLARLL 579
            ++  DC+NAFN+ +R AI+ +     P L  ++A+CY E PA  I+ MD+GER  I   +G+ Q DGMGP LF        +  R +++ LGV L AY+DD+ L    +T E ++ I  LV EL  +G+ +N  K+  +PP  H  T  E   L   G+ +AE  G  VVG P+         + +  ++G GA+ LAR+L
Sbjct:  533 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAEFIQVIPDLVNELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAE-EGITVVGVPIETDAYVEDIAMKVITEG-GADKLARML 731
[Close]
BLAST of mRNA_H-paniculata_contig16734.3800.1 vs. uniprot
Match: A0A6H5JI32_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI32_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 3.340e-28
Identity = 76/203 (37.44%), Postives = 115/203 (56.65%), Query Frame = 1 
Query:    1 LIALDCTNAFNSVERAAILKEVPIRTPGLTPFVAKCYGEKPADIIFQMDTGERLKISSNTGIHQSDGMGPALFS-------MPCREQFEALGVELLAYLDDLVLAMGELTGENLRAIHFLVQELARIGVQINNAKTKVV-PPMNHI-PTEREVAALAAMGISVAEGRGAVVVGTPMGP-TISRSASRRHSSQGKGAEHLARLL 579
            ++  DC+NAFN+ +R AI+ +     P L  ++A+CY E PA  I+ MD+GER  I   +G+ Q DGMGP LF        +  R +++ LGV L AY+DD+ L    +T EN++ I  LV EL  +G+ +N  K+  + PP   + P ER +  L   G+ +AE  G  VVG P+G        + +  ++G GA+ LAR+L
Sbjct:  528 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALHPPGRDVAPAERRL--LGDAGLPIAE-EGITVVGVPIGTDAYVEDIAIKVIAEG-GADKLARML 726
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16734.3800.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JH58_9PHAE6.170e-3638.81Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KDD0_9PHAE1.730e-3237.25Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KKQ2_9PHAE1.030e-3138.31Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KMQ2_9PHAE2.120e-3137.81Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JLG6_9PHAE3.770e-3137.31Reverse transcriptase domain-containing protein n=... [more]
A0A6H5LL14_9PHAE3.990e-3137.62Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KYJ9_9PHAE4.410e-3137.31Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KR59_9PHAE4.540e-3137.31Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KJC0_9PHAE1.080e-2936.82Reverse transcriptase domain-containing protein (F... [more]
A0A6H5JI32_9PHAE3.340e-2837.44Reverse transcriptase domain-containing protein n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16734contigH-paniculata_contig16734:5154..5762 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeOpisthokonta
Seed ortholog score68.2
Seed ortholog evalue5e-09
Seed eggNOG ortholog400682.PAC_15701845
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs39QPF@33154,KOG1075@1,KOG1075@2759
COG Functional cat.S
Best tax levelOpisthokonta
Best eggNOG OGNA|NA|NA
Exons2
Model size588
Cds size588
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929326.5657625-CDS-H-paniculata_contig16734:5153..55131622929326.5657625-CDS-H-paniculata_contig16734:5153..5513Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16734 5154..5513 -
1691480816.934967-CDS-H-paniculata_contig16734:5153..55131691480816.934967-CDS-H-paniculata_contig16734:5153..5513Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16734 5154..5513 -
1622929326.5831695-CDS-H-paniculata_contig16734:5534..57621622929326.5831695-CDS-H-paniculata_contig16734:5534..5762Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16734 5535..5762 -
1691480816.9443161-CDS-H-paniculata_contig16734:5534..57621691480816.9443161-CDS-H-paniculata_contig16734:5534..5762Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16734 5535..5762 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16734.3800.1prot_H-paniculata_contig16734.3800.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig16734 5154..5762 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig16734.3800.1

>prot_H-paniculata_contig16734.3800.1 ID=prot_H-paniculata_contig16734.3800.1|Name=mRNA_H-paniculata_contig16734.3800.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=196bp
LIALDCTNAFNSVERAAILKEVPIRTPGLTPFVAKCYGEKPADIIFQMDT
GERLKISSNTGIHQSDGMGPALFSMPCREQFEALGVELLAYLDDLVLAMG
ELTGENLRAIHFLVQELARIGVQINNAKTKVVPPMNHIPTEREVAALAAM
GISVAEGRGAVVVGTPMGPTISRSASRRHSSQGKGAEHLARLLAHI
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mRNA from alignment at H-paniculata_contig16734:5154..5762-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig16734.3800.1 ID=mRNA_H-paniculata_contig16734.3800.1|Name=mRNA_H-paniculata_contig16734.3800.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=609bp|location=Sequence derived from alignment at H-paniculata_contig16734:5154..5762- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTTATCGCCCTCGACTGTACCAATGCATTCAACTCCGTCGAGCGGGCGGC
TATCTTGAAAGAAGTGCCAATCCGCACCCCAGGACTGACACCTTTCGTAG
CCAAATGCTATGGGGAGAAGCCGGCAGACATCATTTTCCAGATGGACACC
GGTGAACGCCTAAAAATCTCCTCGAACACGGGAATCCACCAGAGCGACGG
AATGGGACCCGCCCTCTTCTCCATGCCCGTGGGACCGATCTTGTGCTAGT
GCCGAGAACAATTCGAGGCTCTGGGTGTGGAGCTATTGGCCTACCTGGAC
GATCTGGTGCTGGCGATGGGGGAGCTGACGGGAGAAAACTTACGGGCGAT
CCATTTCCTCGTGCAAGAGCTAGCACGCATAGGAGTGCAGATCAATAACG
CCAAGACGAAGGTGGTGCCCCCAATGAACCACATCCCCACCGAAAGGGAG
GTCGCTGCGCTGGCGGCGATGGGCATCAGCGTTGCAGAGGGACGGGGGGC
TGTGGTGGTGGGTACACCGATGGGACCGACGATTTCTCGTTCAGCATCAC
GCCGTCACAGTAGTCAAGGAAAAGGGGCAGAGCATCTTGCGCGCCTACTA
GCGCATATA
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Coding sequence (CDS) from alignment at H-paniculata_contig16734:5154..5762-

>mRNA_H-paniculata_contig16734.3800.1 ID=mRNA_H-paniculata_contig16734.3800.1|Name=mRNA_H-paniculata_contig16734.3800.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1176bp|location=Sequence derived from alignment at H-paniculata_contig16734:5154..5762- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTTATCGCCCTCGACTGTACCAATGCATTCAACTCCGTCGAGCGGGCGGC
TATCTTGAAAGAAGTGCCAATCCGCACCCCAGGACTGACACCTTTCGTAG
CCAAATGCTATGGGGAGAAGCCGGCAGACATCATTTTCCAGATGGACACC
GGTGAACGCCTAAAAATCTCCTCGAACACGGGAATCCACCAGAGCGACGG
AATGGGACCCGCCCTCTTCTCCATGCCCCTTATCGCCCTCGACTGTACCA
ATGCATTCAACTCCGTCGAGCGGGCGGCTATCTTGAAAGAAGTGCCAATC
CGCACCCCAGGACTGACACCTTTCGTAGCCAAATGCTATGGGGAGAAGCC
GGCAGACATCATTTTCCAGATGGACACCGGTGAACGCCTAAAAATCTCCT
CGAACACGGGAATCCACCAGAGCGACGGAATGGGACCCGCCCTCTTCTCC
ATGCCCTGCCGAGAACAATTCGAGGCTCTGGGTGTGGAGCTATTGGCCTA
CCTGGACGATCTGGTGCTGGCGATGGGGGAGCTGACGGGAGAAAACTTAC
GGGCGATCCATTTCCTCGTGCAAGAGCTAGCACGCATAGGAGTGCAGATC
AATAACGCCAAGACGAAGGTGGTGCCCCCAATGAACCACATCCCCACCGA
AAGGGAGGTCGCTGCGCTGGCGGCGATGGGCATCAGCGTTGCAGAGGGAC
GGGGGGCTGTGGTGGTGGGTACACCGATGGGACCGACGATTTCTCGTTCA
GCATCACGCCGTCACAGTAGTCAAGGAAAAGGGGCAGAGCATCTTGCGCG
CCTACTAGCGCATATATGCCGAGAACAATTCGAGGCTCTGGGTGTGGAGC
TATTGGCCTACCTGGACGATCTGGTGCTGGCGATGGGGGAGCTGACGGGA
GAAAACTTACGGGCGATCCATTTCCTCGTGCAAGAGCTAGCACGCATAGG
AGTGCAGATCAATAACGCCAAGACGAAGGTGGTGCCCCCAATGAACCACA
TCCCCACCGAAAGGGAGGTCGCTGCGCTGGCGGCGATGGGCATCAGCGTT
GCAGAGGGACGGGGGGCTGTGGTGGTGGGTACACCGATGGGACCGACGAT
TTCTCGTTCAGCATCACGCCGTCACAGTAGTCAAGGAAAAGGGGCAGAGC
ATCTTGCGCGCCTACTAGCGCATATA
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