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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 950 |
| Cds size | 612 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig167.3782.1 >prot_H-paniculata_contig167.3782.1 ID=prot_H-paniculata_contig167.3782.1|Name=mRNA_H-paniculata_contig167.3782.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=204bp
MDIPEDRRRSSGENTWDLSLSPPPSHPNAQLSHSTSSPNLAVDNLKPFDN
NSSHPGEETGDGWRRGDVGVGNGDGGTSAGKRQVGGSGGGGSGSGGSGRS
RLVRWAAALAAGTGAGTNTDAAIGSFKGRPSQGHHRNHGNGGGRSNPAFA
SSASGGGAGGDGGGNGSDEVHITDLPATEGPTTAEGLFVTPVSPLRNRFR
PSAS back to topmRNA from alignment at H-paniculata_contig167:14076..22839+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig167.3782.1 ID=mRNA_H-paniculata_contig167.3782.1|Name=mRNA_H-paniculata_contig167.3782.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8764bp|location=Sequence derived from alignment at H-paniculata_contig167:14076..22839+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATTGAAGTGAAGTTAGGAATGGGCATTTTACCTGGTATCTCAACGTTCTG
TGCCACATGACACCACCTCTCTTGCGCATGTTTCACTACAGCGCAGTATA
GTAGAGTGGATAAGCTTTGGTATCTACAGCCGATCGTCCAGCACCCTGTA
TTGCGTCCTCTACGCATCAGTCTGGTGGAGACAAACATCAAACCATTTTT
GAAATCGCGTGAACTATTGACAGTACAGTACACTTGTTGTATAACTCCTA
CCCAGCACGTGGCAGGAAGGAGAGGGCATCCCAAAAAGCGATACCTTACT
GCCTCTAACATCAAAGGGTGTGGTAAACAGCTCGATACATGGATATCCCT
GAAGATCGCCGGCGGTCAAGTGGCGAAAACACTTGGGATCTTTCACTGTC
ACCACCACCATCACATCCAAATGCCCAGCTGTCGCACAGCACAAGTTCGC
CAAATCTAGCAGTGGACAACTTGAAGCCATTCGACAACAACAGCAGTCAT
CCGGGCGAAGAGACGGGGGATGGATGGCGTCGTGGTGATGTTGGTGTGGG
TAATGGTGATGGTGGCACATCTGCCGGTGAGGAAACGAAATACGTTTAGG
CGCTGAAATGGATGCGGGCCGTCTGTTTCGTCCTGTCTTGGTCCGTGACA
TGTTGATATGTACCGAAGGTGGATGATCGATATTCAACAACACTTGACAC
GATGATATACCGGCTCTATACACAGCAGGATAGACAACACAGAGAGGTAG
ACAGGGGATCATGTATCGTCGTTTTTGCTGTCTAGAGGCCATGTTTGAAC
GTAGGGATCGTGGTTTGCCATCAGCCAGTTTGTTGTGTCCTAGTCCCAGC
GCAGGTAGACCGTAGGGCACAGTGAGTATAGCGCCACTGAGTAGTTGATT
GTATGGTATGATCCATGATGGAGTAGATCGACAAGGCCAAGTCAAGTCGG
TGTGATAGCCCTCAGAAGGAGCTCGCCTTCAGGAAGAAGAGGGTGTTGTG
GGGGCTTGCCTGTGATAATCGATGGAACGCCAGCGGTTGTTTTTTTGCGA
GGCAATAATACAAGTTGAAGGGGAGCACACATCAGATGAAATGGCGGTAA
AGGCCCAGCTATATCCCTTCATACCCAAATTGAATTTCAAAATTAGCTGA
CCTTCAAGCCTTCATCGAATTTTCGGTTTCAGAATTAGCTGTCTCTCAGT
ACTTCATTGCCGGTGAGGATGATGAAGGCTAGCACCTTGATCCGACCGCT
CGTTCATCCAAGGACCCAGCGAAGCGTAGGCATGGTCATATATATTAGAG
CCTGTGGGCATGTGTAATTCGTTAATTCCTTGTCTAAATAAAGGAGTCAA
TCCGTGGTGGCCGCTCCCAAGAAATGAGTGAGTAGTTATTTAGCAAGATC
GGCTCGCTTTGTAGGATTTTAACCCTTTGAGTGCCAGAGGTCTTTTCGGA
ACAGGAAGGCATTTGACAACAAACAACCAATACCAAACGCGGAAGTCGAC
GTGGACAAAGTCACACCAACTCCGCAGTTGTGTCTATACTGTACTGTGAT
TTATTGGACTGGCTATCTGAACAGTGACGGCCCCCTACCTCCGTAACGTC
ATACCATAGACATTGTGTATTTTCCACCCTGTGTTACGCCAGCCTGTTTT
TTCCCCTACATTCTGACCTAAAAATGACATAAGGCGACGTTGGTGAATTT
GGAAAAGTTGCGAAACTGACAACTAGTGATTTGAGACTGAGAGATATGCC
ATGTACGTACGTCCTCGAAGAGGTTCGGAAATGTTTCATTACTCTCAACG
CAACATTTCCGTGATAATTTCGACTGTAGACCTTGAACCACGAGAAATCA
AAGTGTGCTGTGAAGCCCTGACGCATAGCTACTGGTTCGTGGTGGTCCGA
GCGAAAACCACACAACAGGGGAAATAGGAGGTTGACCTAAACAAAAATCG
TGTTCTCCATATATCGCACTATCATCGCTCCTGGCACCCACGATCTTCAG
CGATGATTAGTGTTAGCCTGTGCAGTTGCGTAGCCTCTGCATGAGTGTAG
CGCGAGATATCCACAATTGTCGTTACTGGAGCGAGCAGTGGTGCCCGGGG
TGTTGAGAAAGAAAAAAACAGTATTAAAAAAAAATGCTCAGACGTGACAT
TTTCCCTTCTTGAGGTACTTATGGGTTGAGCAATGACTGGAAAAGGTTAG
ATGGGAACCGGATCTAGAAGGGTTACTAGTTATTAGAGAATTTTTTCATA
AGAAATTTAAGCTCAGGCTGTGCCTACACCCCTACCATCACTAACCAACA
GCTCGTTTGTCAGTAGAACGTACCGCCTTGTCGGAAAGAATGGGTGACTA
TGAACTAACTCAGCACATTACTCCAACAAGACACTATCTCATTGCGCCGA
TTTGAGCTCTGCCAACGCACACTACGCCCGACGGGGTGAGAATTAGGGTT
GTAGTTAGCGTTAGAAACCATAAAAAAGTAATATGTCAACCTTCTTCGGC
CGAATTGACATGCAAGCAAGCCTCAGTCGCTTGTTCAACAATTAGCTATT
GGGAGTTATGTTTCGAGACTCAGTTATTGTTTTTTCCAACCAGAGCTGTC
AGGAGTTTCAACGAAATAATTGTTTTTCAGCACCTAGAATACAGTAGTTG
TGTTATCCGGGGTGTGGCATTTGAGTTGCAGTATTCCAAGTTTACCGCGC
TGCATCTAAGGTACGAGCGGAAGAAAATCATCGTGTTGATGACAAAGCCT
TCAATCTAAAAATTACCAAAAGAACGCGCATAAAAGAGGCCCTCTTGCGC
GGTTGCTATTCCCCGCTAGGGCTCGAAATATCTACACAGAGAACGAGATA
CGGAGAGAGCGACACACACACACACACACACACAGCAAATCCCCCGCGCC
TGCCGCTGTGCTCGCTCGTGTCTTGTCTTGGTCTCCAGGAAAACGACAAG
TTGGAGGTTCGGGTGGAGGTGGTAGCGGTAGCGGCGGCAGCGGAAGAAGC
CGTCTGGTGCGCTGGGCGGCTGCTCTAGCTGCCGGGACGGGGGCAGGCAC
AAATACAGACGCGGCAATCGGTTCCTTCAAAGGCCGACCTAGCCAAGGCC
ACCACCGAAATCATGGCAACGGTGGTGGCCGCAGCAACCCAGCATTCGCT
TCTTCTGCCAGCGGTGGCGGGGCTGGCGGCGATGGCGGTGGCAATGGTGA
TGGTCCGTGTTTTTGCCACTGTTGTGTTTTCCTTGCACACACACAACATT
GCACCTTATTTTTTTTTGTCGAGACTTTTTATGTTTTGCGTGTCTGTTTA
TGTCCCCGCACTCTTTTGTGAACGCGTTTTCAAGGCAAAATTTTCGCCGT
CGAGCTTCTTTGTTGGATCAATGGTAGGATCGTTGGGTTTGGCCTGTTTG
TTTGGTACACGCAACGAATCTCACCGACAAGCGGTAGCACGCCACAGGGG
AGGTCCACATAGCGATTAATCTATACAAAAATAAAATCATCGCCCGGTTA
ATGCGGACGCTGTTCGTGATTGATGCTCTACAGACGACTTATTGGACCAA
TAAATGCAGTGCTTGTATGGGCGTATAATGTGATATAACAAGAATAACAT
GATCCGCGGCGTAACTTGGTAGAAACTTCATTTGGAAGACATTACGACGA
GATCGTTTCGTATTAGCATTCTTCTAGGTGCCTACCATCAGTGAAGGGAG
AGCCCCACGAACTCATGTTCAAATCAGACCAAGTACGAGACTCTTCTCTT
GAGTAATTTGGCAAGGGCGACATAGCCGCGTGGTCTAGTGTAAAGCGAGA
TAACAAGAAGACAACTAAAGAAAGGCACAAGCTTTTTGTTTCTGGGACAA
GCTGTGTCAGCGTTCATCGGAGAGATCGAACTCGTTATAACGTTTGTTGC
GACCTAGGCAACTCCTTTTCCCGACGGTTCGCGCGGGACAAGAATGCCAG
AAATCAGCGAGGAAGCGCTGTCGCAACTGATCGCCACTACAGTGACGGCA
ATGATGCAGCGGCAGCAACAACAACAGCAGCAGCTGAAGCCGAGGAAGGA
GGCAGCGAGTCTCAAGATCGACTTGCAACAATTCTTTGGCGAAGAGCCGA
CAGACTGGCATGATTGGCACAAGGTACACCTTGCGCAGGCCAGGGCTCTT
GGTTGCACAGATGAGCTCACTGTTGCTGAGGATCGGGAAATCAGTTTAGG
CACCGAAGATTTCGATGACACGGGTATGGACCCCGAGAGAGGGCGGAATG
CTCAGAAAGCGTGTAAGGGCTTAGCACTGGGCATTGTGCAGATTACCGAC
TCGCCGAGGAAAGCGCAGCTGAAGCTGGAACAGCACTACCGCGCCAGCGG
ACTAAAGGAAAAGAGCCACCTGATGCGAGAATTCAATTCCATTAGGATGG
AGTCCAGGGGAAGCCCGAAGAATTCATCTTGAGCGTAGACCGTGTCGCCA
AGAATCTAGAGCGACTGGGAAAACCGATAACGAAGACGGCAAAAACCTGA
CGATCGAGAGCGAACTTCCGCAAGAATATGAGGTTGAGCGGCGGGTGCTA
GAGGGTGGCAATGTTGAGCTAACAAGGATGCGCATCGAGAAGGTCATCAT
CAATCAGTACGAGAGACTACAAGAAGAAAAATTGAAGGCTGGCGCGAAGG
CGCTAGCAATAACGGTGAAGTGTACAGACGACAAACGTCAGCTGTGCAAC
CAATCGGGACACTCTGCTCCCCAGTGCAGGAGTTCTCAAATTTCTAAGGG
GCAACAGCACTCCAAGTTCAGCAGGCAATGCTTCACCTGTGGGAAGCGAG
GACACCGCGCCGAGGAGTGCAAGGGAGCAAAGGAGGGAAATGTGATGGGC
ATCAATGGCAAGCCGAAGACTTCTTACACCAGTCGTTACAGGCGAAAGCT
CGCAGCCATGCCGTTCCGAAGATGGCTGATAACCGCGCCACTGAAGGAAG
AAAATGTTTCTTCGTAGATCTGGCTGGAGGAATGCACGTGCCCAGCTTGG
GCGACGGCAAATATTTCATGATCCTTGTGGACGACTGCATGCACTTAAGA
TAGTGAAGTTCTTGAAGAAGAGTGACGCCACATCTGCGCTGCGGAGGTTC
CTCGCAGACTTCATTGTACCAGAAAAAATCATGATCGGAGCTCTCCGCAC
AGACAACGGGGCAGAGTTTGAGGGGAACCTTCAGCGCCTACTGGACAAGC
TCAGAATCACCCACGAGCACACACCCTCAGATATGCCCCAATACAACAAG
GTAGCAGAGAGAGCGCTGAGACTACCGCGTGAGAAAACGATCGCGCTGAT
ACAAGACCTGAAGGAGGGCGATAACGATTGACTGTGGACGGCGGCGATGA
ATTACGCATGCGACCCAACTAATATGAGGCGGACCACGTCAAACGATGAT
TGCATCTCACCGTACGAGAAATAGCATCGGACTGTGCCTGCGCTGGATCA
ACTGCAACCTTTTGGGACGATAGGGTACATATATATGCCCACAAGGAAAC
ACAAACTAGCCCCGCGCGGAGAAAAATGAATCATGCTGGGCACCGCCCGC
AACTCCTTCAAAGCGCGTAACGTAAAGACCGGCCAGATCGTGTACCGTCG
GGACTTGTCGTGGCACCTTGAGAACTCAGAATCCAACGGGACAGCGGCCT
CAGTGTGGGATCTGGGCCGGGGGAGGAGCTACTACCATCAAGAAGACAGA
TCACCTCGGTCGGATGGGGCTACAATCAAACCTGCCAGCATCGGAACAGC
CTCCACAGCCGTCAGAAGACGAGCCGCAGGAGGAAAACAGGAGGGACATA
CCCCGGCGCTGCGTAAACTTGAAAACTAATTCGCGGAAACGCGACAGCTC
GTTTTCTCTGCACGAACGAGAAGTGGCGGAGGTGTAAATAGCAGGGGCGT
TGGAGGGATGGCATTGCCCCGCATCCTTACGGAAGTCGGCGCCCTGGAGA
ACGAAGAAAAAGTGGGATGCCACACTGGAGACCTCATGGCAATGCAAGTG
GCGCTGACGATGCTGGAGGGATTGGAAAGCCATCTCCCTGCGGAACCCAA
CGACCGCTGGGAAACTCTGGCGTCGCTCGAGTGACAACAATGGAGTGTGA
GACGAAGTGAAACGTCCGGACGATAAGCTGGTGGTAGGAACGAAAATGAT
CCACAAGCAAAAAAATCGGCGAGAGCCGTAAGGTGGAAAAATACAAGTGT
CACCTCGTCGCTCAAGAATTCCACCAAATCAAGGGACTCTACTACTAGAA
TACGTTTTCACCTACGCTCGCGGCAGCTAGCATCAGGATAGTACTTGTGA
CCGCTGCGGTGGAAGACTGGGAGCTGAGGGCACGTTGACGCTGAGCAAGC
GTTTTTATATGCGGACATCGACGAGGAATTCTACATCGAACTACCCGAAG
ATCACCAGGAGTTCCCGGGAGCGGTTGGGAGGCTGAATATATCGATTTAC
GGCGTAGCACAAGTAGGGAGATGCTGGAATTTGAAGATCACTAACAATCT
GAAGACGCTTGGGTTCGAGCAATCACATGCAGACCCTTGGGTGTTACGCA
AAGTCGTAGTTGAAGAGGCGGAAGTGATGGCTGTGATCCATGTGGATGAT
GTTTTCGTCGTCGGCAAGTGGGCGGAAAACGTAGACTTGTTTGTGGCGGA
CTTCCGCTCGAGGTTCAAGTTCAAGGATCTGGGAAAGGCGACGCAGCACA
TTGGCTGCTACACATCATGAAGCAAGCAGAAGAGGGGGCTAAGGATCGAC
CAACATCTGTACGCACAAACGACAACCGGCCGTTTCGGGATCGTCAAAAC
CAGCATAACCCCGGCGGCAGCAGGATGCAGACCGCTATCCAAGTGGGGTG
GGCCACAATCTCTGGAGGAGGAAAATGAGGGGCAGGGATTCCCTTACAGA
GAGGCAGTGGGGGCGCGCATGTGGGAGGCGACCATTGGACGACCCGATAT
CGCTATTGCAGTCTGCATTGTGGCAAAGTTCTTCGAAAACCCCGGCCTAG
CACACAAGGAAGTTGTGAAGAAGATTCTGATATACATGCTGGGGACTACG
AATCTAAGCATCGCCTACGGCGGACAAGGTCACAGAGTCGAGATGCTCTC
CTACGCCTACTCAGATCATGTACCTTGCACGGACACCCGGCGATCGGTAT
CAGGCGGAGCGGTGCTGCTGGGAGTTGGCATAATAAGCTGGAAGTCGAGA
ACCCAGGAGGTTGCGGCTTCGGGTACTTCAGAATCGAAGTATGTGGCACT
GGCGGAGATCATGAAAAAATTACTGTTGATTCCAAGTGTAAATGAGCATC
ATGCCGACGCTTGGAAAGCTACCGACCATCAAGATAGCAGACAAAAAGTT
CATCAGCAAGAGGATGGGGCACATCAACGTGAAGCACAGTGTTATTCGCG
ATGCTGTAGACGCAGGACGGGTATGTACTATCTATGCGAAGATGGGAAAA
CCAGCATGCCGATGTGCTCACCAAGACTTTGTAGAAGAGCTCGTTTGATA
AAACATACGAATGGGCTGATGAATGGTGTATGAAATAAAGCCAACGCAGG
GAATAAGCGGAGATCAGACGTATCCGTAAAAATAATGAAGCATGATATAT
ATATATTTATGATATTGGGGAGACTGTTCAAAGTACTGGAAAAAAAAAAG
TGAGGAATATAAAGTAGTGAGGAAATAATTGGGTTTACTTTACTCTTAAT
AGGAACCATGAAAGTCATACTTTGTAGGGCAAGTGGGGATGTTCGCTTTA
CAGACGACCCACAAGACCAATAAATGCAGTACGTGTATGGGCTTGTACTA
TGATAGGACAAGGACTAACATGATATGCGGCGTCACTTAGTAGGAACTTT
ACTTGGAAGTCATTATGACGAAATCGTTTCGTGTTAGCATTGTTCTAGGC
GCCTACCAGTAGAGGAGGGAGACCCTCACCAGCTCACTTTCAAATCAGAC
CGAGCACAAGACTCTTCTCTTGAGTGATTGTGGCAAGGCTAACGTAGCCG
CGTGGGTTACTGTAAAGCGAGATAACGAAAAGACAAGTAAAGAAAGGTAC
AGGCTAGTTATTTCTGGGACACGCTTGCGACTTGCGACCAGCAGGAAGAA
GCCGCGTCAGCGTTCATCGGAGAATATCGAACAAACGCAACGTTCAACCT
TCCTCCCGGGTCCATACCCCCTGCTGGGTATTGCAGCGGCCAGCATTATC
ATACCAAGGTTTTTGTCGAATTTTAAAATGTCATGGCCCACAGATGGACA
ACTTCGACAGGCTGATGCAGTGACACGTGGCCGCATTGGAAGATAACAAA
CGACGATTGGCACGACGTTCCCCCTTTCATGTACCAATGCCAACGCTTTT
TCTTGGGGCGCTATACACGCTTTTTGTTTTGCTTCTCCCATATTTTTTTG
GTCTTCAGATAAGATTATTGCTTACTTGAAATCAAATCCCGTCGTTCATG
AAAGTAGGAATTATGACGAATACTAGCAGCACCACCACAAAAGGTGCACT
CTTCGCAGTACAAAAAAAAACATAAACACCGGCATTACGCAAATAAAAAT
CATGAAATCATATGTGCAACGATCGGCGATAACCGTTTTTGTAACGTCAC
GGTGTTCTCGGGTCATCCTCCACTGATCGTTTTTGCTTCTTGGAGCAGGT
AGCGACGAGGTGCACATAACAGATCTTCCCGCTACGGAAGGTCCGACGAC
AGCCGAAGGCCTTTTCGTGACGCCGGTGTCTCCCCTACGTAACCGCTTTA
GGCCGTCAGCGTCT back to topCoding sequence (CDS) from alignment at H-paniculata_contig167:14076..22839+ >mRNA_H-paniculata_contig167.3782.1 ID=mRNA_H-paniculata_contig167.3782.1|Name=mRNA_H-paniculata_contig167.3782.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1224bp|location=Sequence derived from alignment at H-paniculata_contig167:14076..22839+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGATATCCCTGAAGATCGCCGGCGGTCAAGTGGCGAAAACACTTGGGA
TCTTTCACTGTCACCACCACCATCACATCCAAATGCCCAGCTGTCGCACA
GCACAAGTTCGCCAAATCTAGCAGTGGACAACTTGAAGCCATTCGACAAC
AACAGCAGTCATCCGGGCGAAGAGACGGGGGATGGATGGCGTCGTGGTGA
TGTTGGTGTGGGTAATGGTGATGGTGGCACATCTGCCGATGGATATCCCT
GAAGATCGCCGGCGGTCAAGTGGCGAAAACACTTGGGATCTTTCACTGTC
ACCACCACCATCACATCCAAATGCCCAGCTGTCGCACAGCACAAGTTCGC
CAAATCTAGCAGTGGACAACTTGAAGCCATTCGACAACAACAGCAGTCAT
CCGGGCGAAGAGACGGGGGATGGATGGCGTCGTGGTGATGTTGGTGTGGG
TAATGGTGATGGTGGCACATCTGCCGGAAAACGACAAGTTGGAGGTTCGG
GTGGAGGTGGTAGCGGTAGCGGCGGCAGCGGAAGAAGCCGTCTGGTGCGC
TGGGCGGCTGCTCTAGCTGCCGGGACGGGGGCAGGCACAAATACAGACGC
GGCAATCGGTTCCTTCAAAGGCCGACCTAGCCAAGGCCACCACCGAAATC
ATGGCAACGGTGGTGGCCGCAGCAACCCAGCATTCGCTTCTTCTGCCAGC
GGTGGCGGGGCTGGCGGCGATGGCGGTGGCAATGGAAAACGACAAGTTGG
AGGTTCGGGTGGAGGTGGTAGCGGTAGCGGCGGCAGCGGAAGAAGCCGTC
TGGTGCGCTGGGCGGCTGCTCTAGCTGCCGGGACGGGGGCAGGCACAAAT
ACAGACGCGGCAATCGGTTCCTTCAAAGGCCGACCTAGCCAAGGCCACCA
CCGAAATCATGGCAACGGTGGTGGCCGCAGCAACCCAGCATTCGCTTCTT
CTGCCAGCGGTGGCGGGGCTGGCGGCGATGGCGGTGGCAATGGTAGCGAC
GAGGTGCACATAACAGATCTTCCCGCTACGGAAGGTCCGACGACAGCCGA
AGGCCTTTTCGTGACGCCGGTGTCTCCCCTACGTAACCGCTTTAGGCCGT
CAGCGTCTGTAGCGACGAGGTGCACATAACAGATCTTCCCGCTACGGAAG
GTCCGACGACAGCCGAAGGCCTTTTCGTGACGCCGGTGTCTCCCCTACGT
AACCGCTTTAGGCCGTCAGCGTCT back to top
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