mRNA_H-paniculata_contig16691.3778.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig16691.3778.1 vs. uniprot
Match: D8LQV2_ECTSI (Putative peptidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQV2_ECTSI) HSP 1 Score: 137 bits (345), Expect = 9.480e-33 Identity = 68/92 (73.91%), Postives = 78/92 (84.78%), Query Frame = 3
Query: 783 SRSAGRKRFSGVLASSFQHPFDLEATALLRRLPGLELVVRSVVPAIEDVVYMDNIANSILVGPNQMASLHSLLLEACRILDIEQVPDMYIRQ 1058
+ +A RKRF+G+LA FQHPFDLEAT +LRR PGLE+ +R VPAIED V+MDNIANSILVGP QMASLH LLLEACRILD+ Q PD+YIRQ
Sbjct: 115 ANAAPRKRFNGLLADRFQHPFDLEATGMLRRFPGLEMAIRGAVPAIEDAVFMDNIANSILVGPRQMASLHGLLLEACRILDM-QPPDLYIRQ 205
BLAST of mRNA_H-paniculata_contig16691.3778.1 vs. uniprot
Match: A0A835ZH31_9STRA (Peptidase family M48-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH31_9STRA) HSP 1 Score: 102 bits (254), Expect = 5.240e-21 Identity = 47/75 (62.67%), Postives = 62/75 (82.67%), Query Frame = 3
Query: 834 QHPFDLEATALLRRLPGLELVVRSVVPAIEDVVYMDNIANSILVGPNQMASLHSLLLEACRILDIEQVPDMYIRQ 1058
QHPFD EATA L+RLPGLE VRS +P +ED +Y+DNIAN++LVGP+Q+ S+H LL+AC ILD+ Q P++Y+RQ
Sbjct: 1 QHPFDQEATAALKRLPGLEAAVRSFIPIVEDTIYLDNIANAVLVGPHQLQSIHKSLLQACAILDM-QPPEVYVRQ 74
BLAST of mRNA_H-paniculata_contig16691.3778.1 vs. uniprot
Match: A0A6V1X7Z1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1X7Z1_HETAK) HSP 1 Score: 102 bits (253), Expect = 2.200e-20 Identity = 47/89 (52.81%), Postives = 64/89 (71.91%), Query Frame = 3
Query: 792 AGRKRFSGVLASSFQHPFDLEATALLRRLPGLELVVRSVVPAIEDVVYMDNIANSILVGPNQMASLHSLLLEACRILDIEQVPDMYIRQ 1058
+ R G+ + F+HP D +ATA L+RLPGLE +VR P +E+ VY+DNIA SI VGP QM +LH LL++ACRILDI+ P +Y++Q
Sbjct: 54 SSRVALRGLRSDRFRHPVDRQATAQLQRLPGLEQIVRRATPLVEEAVYLDNIATSIKVGPGQMPALHQLLVDACRILDIKDPPQLYVKQ 142
BLAST of mRNA_H-paniculata_contig16691.3778.1 vs. uniprot
Match: UPI0019E5DAC7 (M48 family metallopeptidase n=1 Tax=Calothrix sp. C42_A2020_038 TaxID=2774333 RepID=UPI0019E5DAC7) HSP 1 Score: 98.6 bits (244), Expect = 1.600e-19 Identity = 48/88 (54.55%), Postives = 69/88 (78.41%), Query Frame = 3
Query: 798 RKRFSGVLASSFQHPFDLEATALLRRLPGLELVVRSVV-PAIEDVVYMDNIANSILVGPNQMASLHSLLLEACRILDIEQVPDMYIRQ 1058
+ + G+ A SF+HP DLEAT L+++PGL+++VR+++ P E + Y++NIA+S+LVG NQ+ LHSLLLEAC+ILDIE P +YIRQ
Sbjct: 5 KNQLIGLKADSFRHPLDLEATQALKQIPGLDMIVRNLLGPFAEQIFYVENIASSVLVGENQLPELHSLLLEACQILDIEP-PQLYIRQ 91
BLAST of mRNA_H-paniculata_contig16691.3778.1 vs. uniprot
Match: A0A2A2TFH8_9CYAN (Peptidase M48 n=1 Tax=Calothrix elsteri CCALA 953 TaxID=987040 RepID=A0A2A2TFH8_9CYAN) HSP 1 Score: 97.4 bits (241), Expect = 4.100e-19 Identity = 48/83 (57.83%), Postives = 67/83 (80.72%), Query Frame = 3
Query: 813 GVLASSFQHPFDLEATALLRRLPGLELVVRSVV-PAIEDVVYMDNIANSILVGPNQMASLHSLLLEACRILDIEQVPDMYIRQ 1058
G+ A SF+HP DLEAT L+++PGL+++VR+++ P E V Y++NIA+SILVG NQ+ LH+LLLEAC+ILDIE P +Y+RQ
Sbjct: 10 GLKADSFRHPLDLEATKTLKQIPGLDMMVRNLLGPVAEQVFYVENIASSILVGENQLPDLHNLLLEACKILDIEP-PQLYLRQ 91
BLAST of mRNA_H-paniculata_contig16691.3778.1 vs. uniprot
Match: A0A1Q4RZQ0_9CYAN (Peptidase M48 n=6 Tax=Cyanobacteria TaxID=1117 RepID=A0A1Q4RZQ0_9CYAN) HSP 1 Score: 96.7 bits (239), Expect = 7.660e-19 Identity = 47/88 (53.41%), Postives = 69/88 (78.41%), Query Frame = 3
Query: 798 RKRFSGVLASSFQHPFDLEATALLRRLPGLELVVRSVV-PAIEDVVYMDNIANSILVGPNQMASLHSLLLEACRILDIEQVPDMYIRQ 1058
+ + G+ A SF+HP DLEAT L+++PGL+++VR+++ P E V Y++NIA+S+LVG NQ+ LH+LLLEAC++LDIE P +YIRQ
Sbjct: 5 KNQLIGLKADSFRHPLDLEATKALKQIPGLDMMVRNLLGPLAEQVFYVENIASSVLVGQNQLPELHNLLLEACKMLDIEP-PQLYIRQ 91
BLAST of mRNA_H-paniculata_contig16691.3778.1 vs. uniprot
Match: A0A1Z3HU22_9CYAN (Peptidase M48 domain protein n=1 Tax=Halomicronema hongdechloris C2206 TaxID=1641165 RepID=A0A1Z3HU22_9CYAN) HSP 1 Score: 96.3 bits (238), Expect = 9.780e-19 Identity = 45/89 (50.56%), Postives = 67/89 (75.28%), Query Frame = 3
Query: 795 GRKRFSGVLASSFQHPFDLEATALLRRLPGLELVVRSVV-PAIEDVVYMDNIANSILVGPNQMASLHSLLLEACRILDIEQVPDMYIRQ 1058
G+ G+ A+ F+HP DLEAT LR+LPGL++++RS++ P E + Y+DNIA+S+LVG Q+ +H LL+EACRILD++ P +Y+RQ
Sbjct: 3 GKVTLVGLKANQFRHPLDLEATQALRQLPGLDMLIRSLIAPLAEQIFYLDNIASSVLVGERQLPEIHRLLVEACRILDLDP-PQLYVRQ 90
BLAST of mRNA_H-paniculata_contig16691.3778.1 vs. uniprot
Match: A0A8J7LAM9_9NOST (M48 family metallopeptidase n=2 Tax=Nostocaceae TaxID=1162 RepID=A0A8J7LAM9_9NOST) HSP 1 Score: 96.3 bits (238), Expect = 1.030e-18 Identity = 48/83 (57.83%), Postives = 66/83 (79.52%), Query Frame = 3
Query: 813 GVLASSFQHPFDLEATALLRRLPGLELVVRSVV-PAIEDVVYMDNIANSILVGPNQMASLHSLLLEACRILDIEQVPDMYIRQ 1058
G+ A +F+HP DLEAT L+++PGL+L+VR+ + P +E V Y++NIA+SILVG NQ+ LH LLLEAC+ILDIE P +Y+RQ
Sbjct: 10 GLKADAFRHPLDLEATKSLKQIPGLDLMVRNWLGPMVEQVFYVENIASSILVGENQLPDLHKLLLEACKILDIEP-PQLYVRQ 91
BLAST of mRNA_H-paniculata_contig16691.3778.1 vs. uniprot
Match: K9QY11_NOSS7 (Zn-dependent protease with chaperone function n=14 Tax=Nostocaceae TaxID=1162 RepID=K9QY11_NOSS7) HSP 1 Score: 95.1 bits (235), Expect = 2.620e-18 Identity = 45/83 (54.22%), Postives = 66/83 (79.52%), Query Frame = 3
Query: 813 GVLASSFQHPFDLEATALLRRLPGLELVVRSVV-PAIEDVVYMDNIANSILVGPNQMASLHSLLLEACRILDIEQVPDMYIRQ 1058
G+ A SF+HP DLEAT L+++PGL+++VR+++ P E V Y++NIA+S+LVG Q+ +LH LLLEAC++LDIE P +Y+RQ
Sbjct: 10 GLKADSFRHPLDLEATKALKQIPGLDMIVRNLLGPMAEQVFYVENIASSVLVGEKQLPNLHKLLLEACKVLDIEP-PQLYVRQ 91
BLAST of mRNA_H-paniculata_contig16691.3778.1 vs. uniprot
Match: UPI001EDEE886 (M48 family metallopeptidase n=2 Tax=Nostocaceae TaxID=1162 RepID=UPI001EDEE886) HSP 1 Score: 95.1 bits (235), Expect = 2.620e-18 Identity = 46/83 (55.42%), Postives = 65/83 (78.31%), Query Frame = 3
Query: 813 GVLASSFQHPFDLEATALLRRLPGLELVVRSVV-PAIEDVVYMDNIANSILVGPNQMASLHSLLLEACRILDIEQVPDMYIRQ 1058
G+ A SF+HP DLEAT L+++PGL+++VR+++ P E V Y++NIA+S+LVG Q+ LH LLLEAC+ILDIE P +Y+RQ
Sbjct: 10 GLKADSFRHPLDLEATKTLKQIPGLDMIVRNLLGPMAEQVFYVENIASSVLVGEQQLPELHKLLLEACKILDIEP-PQLYVRQ 91 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16691.3778.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig16691.3778.1 >prot_H-paniculata_contig16691.3778.1 ID=prot_H-paniculata_contig16691.3778.1|Name=mRNA_H-paniculata_contig16691.3778.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=344bp MRQQRMIGPQAIVIVAAVHACRLLSVSIATAATAHGAWGGPLRWPVGGGIback to top mRNA from alignment at H-paniculata_contig16691:240..4130+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig16691.3778.1 ID=mRNA_H-paniculata_contig16691.3778.1|Name=mRNA_H-paniculata_contig16691.3778.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3891bp|location=Sequence derived from alignment at H-paniculata_contig16691:240..4130+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig16691:240..4130+ >mRNA_H-paniculata_contig16691.3778.1 ID=mRNA_H-paniculata_contig16691.3778.1|Name=mRNA_H-paniculata_contig16691.3778.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2064bp|location=Sequence derived from alignment at H-paniculata_contig16691:240..4130+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |