prot_H-paniculata_contig1667.3768.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig1667.3768.1
Unique Name	prot_H-paniculata_contig1667.3768.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	113

Homology

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BLAST of mRNA_H-paniculata_contig1667.3768.1 vs. uniprot
Match: A0A6H5L318_9PHAE (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L318_9PHAE)

HSP 1 Score: 207 bits (527), Expect = 1.980e-66
Identity = 97/112 (86.61%), Postives = 104/112 (92.86%), Query Frame = 0

Query:    1 MDASSCAPVVTDDNFEAKVLDVDAPVLVFFRAPWCGPCRMVGPVVDEVINEHGDKLKVFELCTDDNPKTVAEFKIRNIPTLMLFHERKSVMTVVGAVPKSGLVSSIKKHMDL 112
            MDASSCAP +TDD+FEA+VLD D PVLVFFRAPWCGPCRMVGP+VDEVI +HG KLKV ELCTD+NPKTVAEFKIRNIPTLMLF +RKSVMTVVGAVPKS LVSSIKKHMDL
Sbjct:   80 MDASSCAPEITDDSFEAEVLDEDRPVLVFFRAPWCGPCRMVGPIVDEVIADHGSKLKVLELCTDENPKTVAEFKIRNIPTLMLFSDRKSVMTVVGAVPKSALVSSIKKHMDL 191

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BLAST of mRNA_H-paniculata_contig1667.3768.1 vs. uniprot
Match: D7G7W3_ECTSI (Thioredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7W3_ECTSI)

HSP 1 Score: 202 bits (513), Expect = 2.050e-65
Identity = 95/112 (84.82%), Postives = 102/112 (91.07%), Query Frame = 0

Query:    1 MDASSCAPVVTDDNFEAKVLDVDAPVLVFFRAPWCGPCRMVGPVVDEVINEHGDKLKVFELCTDDNPKTVAEFKIRNIPTLMLFHERKSVMTVVGAVPKSGLVSSIKKHMDL 112
            MDA SCAP +TDD+FEA+VLD D PVLVFFRA WCGPCRMVGP+VDEVI +HG KLKV ELCTD+NPKTVAEFKIRNIPTLMLF +RKSVMTVVGAVPKS LVSSIKKHMDL
Sbjct:    1 MDARSCAPEITDDSFEAEVLDEDRPVLVFFRAAWCGPCRMVGPIVDEVIADHGGKLKVLELCTDENPKTVAEFKIRNIPTLMLFSDRKSVMTVVGAVPKSALVSSIKKHMDL 112

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BLAST of mRNA_H-paniculata_contig1667.3768.1 vs. uniprot
Match: A0A1D8TLH5_9CYAN (Thioredoxin n=1 Tax=Moorena producens PAL-8-15-08-1 TaxID=1458985 RepID=A0A1D8TLH5_9CYAN)

HSP 1 Score: 131 bits (330), Expect = 1.360e-37
Identity = 61/107 (57.01%), Postives = 83/107 (77.57%), Query Frame = 0

Query:    4 SSCAPVVTDDNFEAKVLDVDAPVLVFFRAPWCGPCRMVGPVVDEVINEHGDKLKVFELCTDDNPKTVAEFKIRNIPTLMLFHERKSVMTVVGAVPKSGLVSSIKKHM 110
            S+ APV TD +F+A+VL+ D PVLV F APWCGPCRMV PVV+E+  ++GDK+KV +L TD+NPK   E+ IR+IPTLM+F   + V  VVGAVPK+ L ++++KH+
Sbjct:    2 SNAAPV-TDSSFQAEVLESDIPVLVDFWAPWCGPCRMVAPVVEEIAQQYGDKVKVVKLNTDENPKVAGEYGIRSIPTLMIFKGGQRVDMVVGAVPKTTLANTLEKHL 107

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BLAST of mRNA_H-paniculata_contig1667.3768.1 vs. uniprot
Match: A0A0C5DCS2_GRALE (Thioredoxin n=5 Tax=Gracilariopsis TaxID=2781 RepID=A0A0C5DCS2_GRALE)

HSP 1 Score: 131 bits (330), Expect = 1.540e-37
Identity = 60/104 (57.69%), Postives = 77/104 (74.04%), Query Frame = 0

Query:    8 PVVTDDNFEAKVLDVDAPVLVFFRAPWCGPCRMVGPVVDEVINEHGDKLKVFELCTDDNPKTVAEFKIRNIPTLMLFHERKSVMTVVGAVPKSGLVSSIKKHMD 111
            P V D +F  +V+    PVLV F APWCGPCRMV PVVDE+ NE+ DKLKV ++ TD+NP T  E+ IR+IPTLM+F E K V TV+GAVPKS L  ++KK+++
Sbjct:    4 PQVLDTSFHEEVIKSSCPVLVDFWAPWCGPCRMVAPVVDEIANEYKDKLKVVKINTDENPSTATEYAIRSIPTLMIFIEGKKVDTVIGAVPKSTLAKTLKKYIN 107

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BLAST of mRNA_H-paniculata_contig1667.3768.1 vs. uniprot
Match: A0A524RKQ5_9CYAN (Thioredoxin n=2 Tax=Aphanocapsa feldmannii TaxID=192050 RepID=A0A524RKQ5_9CYAN)

HSP 1 Score: 129 bits (325), Expect = 7.860e-37
Identity = 60/106 (56.60%), Postives = 78/106 (73.58%), Query Frame = 0

Query:    5 SCAPVVTDDNFEAKVLDVDAPVLVFFRAPWCGPCRMVGPVVDEVINEHGDKLKVFELCTDDNPKTVAEFKIRNIPTLMLFHERKSVMTVVGAVPKSGLVSSIKKHM 110
            S A  VTDD+FE +VL  D PVL+ F APWCGPCRMV P+VDE+ +E   ++KV +L TD+NP   +++ IR+IPTLMLF   + V TVVGAVPK+ L S+I KH+
Sbjct:    2 SSAAAVTDDSFEVEVLKSDIPVLIDFWAPWCGPCRMVAPIVDEIASEFAGRIKVVKLNTDENPNVASQYGIRSIPTLMLFKAGQRVDTVVGAVPKNTLSSTITKHL 107

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BLAST of mRNA_H-paniculata_contig1667.3768.1 vs. uniprot
Match: A0A1B7W1G5_APHFL (Thioredoxin n=5 Tax=Nostocales TaxID=1161 RepID=A0A1B7W1G5_APHFL)

HSP 1 Score: 129 bits (324), Expect = 1.220e-36
Identity = 58/106 (54.72%), Postives = 82/106 (77.36%), Query Frame = 0

Query:    5 SCAPVVTDDNFEAKVLDVDAPVLVFFRAPWCGPCRMVGPVVDEVINEHGDKLKVFELCTDDNPKTVAEFKIRNIPTLMLFHERKSVMTVVGAVPKSGLVSSIKKHM 110
            S A  VTD  F+ +VLD   PVLV F APWCGPCRMVGPVVDE+ +++G+KLKV ++ TD+NP+  +++ IR+IPTLM+F + + V  VVGAVPK+ L ++++KH+
Sbjct:    2 SAAAPVTDSTFKEEVLDSIVPVLVDFWAPWCGPCRMVGPVVDEIADQYGEKLKVVKVNTDENPQIASQYGIRSIPTLMIFKDGQKVDMVVGAVPKTTLSTTVEKHL 107

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BLAST of mRNA_H-paniculata_contig1667.3768.1 vs. uniprot
Match: A0A1B0TID6_9FLOR (Thioredoxin n=1 Tax=Ceramium sungminbooi TaxID=1896769 RepID=A0A1B0TID6_9FLOR)

HSP 1 Score: 128 bits (321), Expect = 3.190e-36
Identity = 58/104 (55.77%), Postives = 78/104 (75.00%), Query Frame = 0

Query:    8 PVVTDDNFEAKVLDVDAPVLVFFRAPWCGPCRMVGPVVDEVINEHGDKLKVFELCTDDNPKTVAEFKIRNIPTLMLFHERKSVMTVVGAVPKSGLVSSIKKHMD 111
            P VTD++F   V+  + PVLV F APWCGPCR++ PV+DE+ NE+ D LKV ++ TDDNP    E+ IR+IPT+M+F E + V TV+GAVPKS L+SSI+KH+ 
Sbjct:    4 PNVTDNSFNEDVIQSNFPVLVDFWAPWCGPCRLIAPVLDEIANEYQDILKVVKINTDDNPTISTEYGIRSIPTVMIFVEGQKVGTVIGAVPKSTLISSIEKHLQ 107

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BLAST of mRNA_H-paniculata_contig1667.3768.1 vs. uniprot
Match: B1X5G8_PAUCH (Thioredoxin n=1 Tax=Paulinella chromatophora TaxID=39717 RepID=B1X5G8_PAUCH)

HSP 1 Score: 127 bits (320), Expect = 5.110e-36
Identity = 61/110 (55.45%), Postives = 81/110 (73.64%), Query Frame = 0

Query:    1 MDASSCAPVVTDDNFEAKVLDVDAPVLVFFRAPWCGPCRMVGPVVDEVINEHGDKLKVFELCTDDNPKTVAEFKIRNIPTLMLFHERKSVMTVVGAVPKSGLVSSIKKHM 110
            M+  S A  VTD +FE ++L  + PVLV F APWCGPCRM+ P+VDE+  E   KLKVF+L TD+NP   +++ IR+IPTLM+F+E + V TVVGAVPKS L  +I+KH+
Sbjct:    1 MEKMSSAADVTDASFETEILMSNIPVLVDFWAPWCGPCRMLAPIVDEIAKEFEGKLKVFKLNTDENPTIASQYGIRSIPTLMIFNEGQKVDTVVGAVPKSTLSVTIEKHV 110

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BLAST of mRNA_H-paniculata_contig1667.3768.1 vs. uniprot
Match: A0A1C9CAY7_9FLOR (Thioredoxin n=2 Tax=Ahnfeltia TaxID=28022 RepID=A0A1C9CAY7_9FLOR)

HSP 1 Score: 127 bits (319), Expect = 6.250e-36
Identity = 53/100 (53.00%), Postives = 78/100 (78.00%), Query Frame = 0

Query:   12 DDNFEAKVLDVDAPVLVFFRAPWCGPCRMVGPVVDEVINEHGDKLKVFELCTDDNPKTVAEFKIRNIPTLMLFHERKSVMTVVGAVPKSGLVSSIKKHMD 111
            D +F+ +V++ + PVLV F APWCGPCRM+ PV+DE+ +E+G  +KV ++ TDDNP T  E+ IR+IPTLM+F++ K V TV+GAVPKS L S++ K+++
Sbjct:    2 DSSFQQEVIESNKPVLVDFWAPWCGPCRMIAPVIDEIADEYGQSIKVVKINTDDNPSTATEYGIRSIPTLMIFNDGKRVDTVIGAVPKSTLASTLNKYLN 101

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BLAST of mRNA_H-paniculata_contig1667.3768.1 vs. uniprot
Match: A0A089PAQ0_9CYAN (Thioredoxin n=18 Tax=Prochlorococcus TaxID=1218 RepID=A0A089PAQ0_9CYAN)

HSP 1 Score: 127 bits (319), Expect = 6.440e-36
Identity = 59/106 (55.66%), Postives = 77/106 (72.64%), Query Frame = 0

Query:    5 SCAPVVTDDNFEAKVLDVDAPVLVFFRAPWCGPCRMVGPVVDEVINEHGDKLKVFELCTDDNPKTVAEFKIRNIPTLMLFHERKSVMTVVGAVPKSGLVSSIKKHM 110
            S AP VTD +F+  VL  D PVLV F APWCGPCRMV PVV+E+  +   K+KVF+L TD+NP   +++ IR+IPTLM+F   + V TVVGAVPK+ L S++ KH+
Sbjct:    2 SSAPAVTDSSFDKDVLQSDLPVLVDFWAPWCGPCRMVAPVVEEISKDFEGKIKVFKLNTDENPNVASQYGIRSIPTLMIFKGGQKVDTVVGAVPKATLSSTLTKHL 107

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig1667.3768.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig1667.3768.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L318_9PHAE	1.980e-66	86.61	Thioredoxin domain-containing protein n=1 Tax=Ecto...	[more]
D7G7W3_ECTSI	2.050e-65	84.82	Thioredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2...	[more]
A0A1D8TLH5_9CYAN	1.360e-37	57.01	Thioredoxin n=1 Tax=Moorena producens PAL-8-15-08-...	[more]
A0A0C5DCS2_GRALE	1.540e-37	57.69	Thioredoxin n=5 Tax=Gracilariopsis TaxID=2781 RepI...	[more]
A0A524RKQ5_9CYAN	7.860e-37	56.60	Thioredoxin n=2 Tax=Aphanocapsa feldmannii TaxID=1...	[more]
A0A1B7W1G5_APHFL	1.220e-36	54.72	Thioredoxin n=5 Tax=Nostocales TaxID=1161 RepID=A0...	[more]
A0A1B0TID6_9FLOR	3.190e-36	55.77	Thioredoxin n=1 Tax=Ceramium sungminbooi TaxID=189...	[more]
B1X5G8_PAUCH	5.110e-36	55.45	Thioredoxin n=1 Tax=Paulinella chromatophora TaxID...	[more]
A0A1C9CAY7_9FLOR	6.250e-36	53.00	Thioredoxin n=2 Tax=Ahnfeltia TaxID=28022 RepID=A0...	[more]
A0A089PAQ0_9CYAN	6.440e-36	55.66	Thioredoxin n=18 Tax=Prochlorococcus TaxID=1218 Re...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 26..34 score: 58.83 coord: 74..85 score: 35.97 coord: 34..43 score: 59.22
None	No IPR available	GENE3D	3.40.30.10		coord: 9..111 e-value: 9.8E-28 score: 98.2
None	No IPR available	PANTHER	PTHR45663	FAMILY NOT NAMED	coord: 5..112
None	No IPR available	PANTHER	PTHR45663:SF1		coord: 5..112
IPR005746	Thioredoxin	PIRSF	PIRSF000077	Thioredoxin	coord: 4..110 e-value: 1.5E-32 score: 109.7
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 9..108 e-value: 9.1E-25 score: 86.6
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 1..111 score: 11.516
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 7..111

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig1667	contig	H-paniculata_contig1667:21120..22637 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig1667.3768.1	mRNA_H-paniculata_contig1667.3768.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig1667 20742..23198 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig1667.3768.1 ID=prot_H-paniculata_contig1667.3768.1|Name=mRNA_H-paniculata_contig1667.3768.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=113bp
MDASSCAPVVTDDNFEAKVLDVDAPVLVFFRAPWCGPCRMVGPVVDEVIN
EHGDKLKVFELCTDDNPKTVAEFKIRNIPTLMLFHERKSVMTVVGAVPKS
GLVSSIKKHMDL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005746	Thioredoxin
IPR013766	Thioredoxin_domain
IPR036249	Thioredoxin-like_sf