mRNA_H-paniculata_contig16585.3734.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig16585.3734.1
Unique NamemRNA_H-paniculata_contig16585.3734.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig16585.3734.1 vs. uniprot
Match: D7FY10_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY10_ECTSI)

HSP 1 Score: 434 bits (1115), Expect = 1.640e-151
Identity = 212/258 (82.17%), Postives = 232/258 (89.92%), Query Frame = 1
Query:    1 GVGINACSLSQLRRLSEEAPGSSIGVRFNPGMGSGGTKRTNVGGPASSFGVWHEWVDEVKEICAAGDLKVVRVHTHIGSGSDPAVWQKVSRMSLELVRQFPDVVTLNLGGGYKTGRMLGEASTDLQAIGAPVRADFESFAEKTGRELKLEIEPGTFLVANAGSLVCTVQDIVSTGQSGNEFIKLDAGMTELLRPSLYGALHPIVVVPSKGVGGGKGPTAEYVVVGHCCESGDLLTPVSGSAEEIDRRVLDKAEIGGCI 774
            GV INACSLSQLR+++EEAPGSS+GVRFNPG+GSGGTK TNVGGP+SSFG+W+EW DEVKEICA GDL V R+HTHIGSGSDPAVWQKVS MSL+LVRQFP V TLNLGGGYK GRM GE STDLQAIGAPV  DFE+FAE+TGR+LKLEIEPGTFLVANAGSLVCT QD+VSTG  G EFIKLDAGMTELLRPSLYGALHPIVVVP++G GGG+  TAEYVVVGHCCESGDLLTPVSG+A EI+RR L KAEIG  +
Sbjct:    2 GVDINACSLSQLRKIAEEAPGSSVGVRFNPGLGSGGTKSTNVGGPSSSFGIWYEWADEVKEICAGGDLTVSRIHTHIGSGSDPAVWQKVSGMSLDLVRQFPTVTTLNLGGGYKVGRMSGEQSTDLQAIGAPVMGDFEAFAEETGRKLKLEIEPGTFLVANAGSLVCTAQDLVSTGSGGYEFIKLDAGMTELLRPSLYGALHPIVVVPAEGEGGGE--TAEYVVVGHCCESGDLLTPVSGAASEIERRTLAKAEIGDLV 257          
BLAST of mRNA_H-paniculata_contig16585.3734.1 vs. uniprot
Match: A0A6H5JSP9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSP9_9PHAE)

HSP 1 Score: 429 bits (1102), Expect = 1.080e-145
Identity = 210/258 (81.40%), Postives = 229/258 (88.76%), Query Frame = 1
Query:    1 GVGINACSLSQLRRLSEEAPGSSIGVRFNPGMGSGGTKRTNVGGPASSFGVWHEWVDEVKEICAAGDLKVVRVHTHIGSGSDPAVWQKVSRMSLELVRQFPDVVTLNLGGGYKTGRMLGEASTDLQAIGAPVRADFESFAEKTGRELKLEIEPGTFLVANAGSLVCTVQDIVSTGQSGNEFIKLDAGMTELLRPSLYGALHPIVVVPSKGVGGGKGPTAEYVVVGHCCESGDLLTPVSGSAEEIDRRVLDKAEIGGCI 774
            GV INACSLSQLRR++EEAPGSS+GVRFNPG+GSGGTK TNVGGP+SSFG+W+EW DEVKEICA GDL V R+HTHIGSGSDPAVWQKVS MSL+LVRQFP V TLNLGGGYK GRM GE STDLQAIGAPV  DFE+FA++TGR+LKLEIEPGTFLVANAGSLVCT QD+VSTG  G EFIKLDAGMTELLRPSLYGALHPIVVVP++G G   G TAEYVVVGHCCESGDLLTPVSG+A EI+RR L K EIG  +
Sbjct:  266 GVDINACSLSQLRRIAEEAPGSSVGVRFNPGLGSGGTKSTNVGGPSSSFGIWYEWADEVKEICAGGDLTVSRIHTHIGSGSDPAVWQKVSGMSLDLVRQFPTVTTLNLGGGYKVGRMSGEQSTDLQAIGAPVMEDFEAFAQETGRKLKLEIEPGTFLVANAGSLVCTAQDLVSTGSGGYEFIKLDAGMTELLRPSLYGALHPIVVVPAEGEG--DGDTAEYVVVGHCCESGDLLTPVSGAASEIERRTLAKVEIGDLV 521          
BLAST of mRNA_H-paniculata_contig16585.3734.1 vs. uniprot
Match: A0A7S3C547_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3C547_9VIRI)

HSP 1 Score: 357 bits (916), Expect = 2.160e-120
Identity = 176/258 (68.22%), Postives = 204/258 (79.07%), Query Frame = 1
Query:    1 GVGINACSLSQLRRLSEEAPGSSIGVRFNPGMGSGGTKRTNVGGPASSFGVWHEWVDEVKEICAAGDLKVVRVHTHIGSGSDPAVWQKVSRMSLELVRQFPDVVTLNLGGGYKTGRMLGEASTDLQAIGAPVRADFESFAEKTGRELKLEIEPGTFLVANAGSLVCTVQDIVSTGQSGNEFIKLDAGMTELLRPSLYGALHPIVVVPSKGVGGGKGPTAEYVVVGHCCESGDLLTPVSGSAEEIDRRVLDKAEIGGCI 774
            GV INACSLSQL+R  E  PG+ +G+RFNPG+GSGGT +TNVGGP+SSFG+WHE + E + I     LKVVR+HTHIGSGSDPAVWQKVS MSL+LVRQFP+V TLNLGGGYK GRM GEASTDL  +GAPV   F++FAE+TGREL LEIEPGTFL+ANAG+LV TVQD+V+TG +G++FIKLDAGMTE+LRPSLYGA HP+V+V  K  G        YVVVGHCCESGDL+TP     E I  R L KAE G  I
Sbjct:   59 GVKINACSLSQLQRFGEACPGAEVGLRFNPGLGSGGTGKTNVGGPSSSFGIWHELLPETQRIAEEHGLKVVRIHTHIGSGSDPAVWQKVSGMSLDLVRQFPEVATLNLGGGYKVGRMAGEASTDLDVVGAPVADAFKAFAEETGRELHLEIEPGTFLLANAGALVSTVQDVVTTGSTGHDFIKLDAGMTEVLRPSLYGAQHPLVLV--KAGGSAAEGDESYVVVGHCCESGDLMTPAPDEPETITERALGKAECGDLI 314          
BLAST of mRNA_H-paniculata_contig16585.3734.1 vs. uniprot
Match: A0A7S1XR44_9STRA (Hypothetical protein (Fragment) n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XR44_9STRA)

HSP 1 Score: 348 bits (894), Expect = 1.730e-116
Identity = 170/255 (66.67%), Postives = 198/255 (77.65%), Query Frame = 1
Query:    1 GVGINACSLSQLRRLSEEAPGSSIGVRFNPGMGSGGTKRTNVGGPASSFGVWHEWVDEVKEICAAGDLKVVRVHTHIGSGSDPAVWQKVSRMSLELVRQFPDVVTLNLGGGYKTGRMLGEASTDLQAIGAPVRADFESFAEKTGRELKLEIEPGTFLVANAGSLVCTVQDIVSTGQSGNEFIKLDAGMTELLRPSLYGALHPIVVVPSKGVGGGKGPTAEYVVVGHCCESGDLLTPVSGSAEEIDRRVLDKAEIG 765
            G+ +NACS+ QL+R     PG+ +G+RFNPG+GSGGT +TNVGGP SSFG+WHE  DE  EI  A    V R+HTHIGSGSDPAVWQ+VS MSL+L R+FPDVVTLNLGGGYK GRM+GEASTDL  +GAPV+A FE+FA  TGREL+LEIEPGTFL+ANA SL+C VQD+V+TG +G +FIKLDAGMTE+LRPSLYGA HP+V +P    G        YVVVGHCCESGDLLTP  G  E I  R L K EIG
Sbjct:  160 GIKVNACSVEQLKRYVGALPGTPVGLRFNPGLGSGGTGKTNVGGPDSSFGIWHELADECAEIAGATGTPVERIHTHIGSGSDPAVWQRVSGMSLDLCRRFPDVVTLNLGGGYKVGRMIGEASTDLGVVGAPVKAAFEAFAADTGRELRLEIEPGTFLLANACSLLCGVQDVVTTGAAGRKFIKLDAGMTEVLRPSLYGAQHPLVTIPKAQTG----EFENYVVVGHCCESGDLLTPAPGEPETIAERSLSKVEIG 410          
BLAST of mRNA_H-paniculata_contig16585.3734.1 vs. uniprot
Match: A0A7R9Y6N3_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9Y6N3_9VIRI)

HSP 1 Score: 349 bits (896), Expect = 3.490e-116
Identity = 175/258 (67.83%), Postives = 201/258 (77.91%), Query Frame = 1
Query:    1 GVGINACSLSQLRRLSEEAPGSSIGVRFNPGMGSGGTKRTNVGGPASSFGVWHEWVDEVKEICAAGDLKVVRVHTHIGSGSDPAVWQKVSRMSLELVRQFPDVVTLNLGGGYKTGRMLGEASTDLQAIGAPVRADFESFAEKTGRELKLEIEPGTFLVANAGSLVCTVQDIVSTGQSGNEFIKLDAGMTELLRPSLYGALHPIVVVPSKGVGGGKGPTAEYVVVGHCCESGDLLTPVSGSAEEIDRRVLDKAEIGGCI 774
            GV +NACSL QLRR     PG  +G+RFNPG+GSGGT +TNVGGP+SSFG+WHE + E +EI AA DLKVVR+HTHIGSGSDPAVWQKVS MSL+L RQFPDV  LNLGGGYK GRM  EASTDLQ +G PV   F +FAE+TGREL LEIEPGTFL+ANAG+LV  VQD+VSTG  G+ FIKLD+GMTE+LRPSLYGA HPIV+V + G    +G  + YVVVGHCCESGDL+TP     E I  R L  AE+G  I
Sbjct:  143 GVKVNACSLEQLRRFGAAFPGGEVGLRFNPGLGSGGTGKTNVGGPSSSFGIWHESLPECQEIAAAHDLKVVRIHTHIGSGSDPAVWQKVSGMSLDLCRQFPDVTHLNLGGGYKVGRMSYEASTDLQVVGEPVTDAFRAFAEETGRELALEIEPGTFLLANAGALVTAVQDVVSTGAEGHNFIKLDSGMTEVLRPSLYGAQHPIVLVKNGGTAA-EGDES-YVVVGHCCESGDLMTPAPDEPEVITERALGAAEVGDLI 398          
BLAST of mRNA_H-paniculata_contig16585.3734.1 vs. uniprot
Match: A0A7S2SXD7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SXD7_9STRA)

HSP 1 Score: 346 bits (887), Expect = 1.970e-114
Identity = 169/258 (65.50%), Postives = 199/258 (77.13%), Query Frame = 1
Query:    1 GVGINACSLSQLRRLSEEAPGSSIGVRFNPGMGSGGTKRTNVGGPASSFGVWHEWVDEVKEICAAGDLKVVRVHTHIGSGSDPAVWQKVSRMSLELVRQFPDVVTLNLGGGYKTGRMLGEASTDLQAIGAPVRADFESFAEKTGRELKLEIEPGTFLVANAGSLVCTVQDIVSTGQSGNEFIKLDAGMTELLRPSLYGALHPIVVVPSKGVGGGKGPTAEYVVVGHCCESGDLLTPVSGSAEEIDRRVLDKAEIGGCI 774
            G+ INACSL QLRR  E+ PGS +G+RFNPG+GSGGT +TNVGGP+SSFG+WHE  D+V  I    DLKVVR+HTHIGSGSDPAVWQ+VS MSL+LVR+FPDV  LNLGGGYK GRM  E STDL  +GAPV+  F +FAE+TGREL LEIEPGTFLVANAG++VC+VQD V+TG  G+ F+KLDAGMT++LRPSLYGA HP+VVV S+        T   VVVGHCCESGDLL+   G  E ID R +  A  G  +
Sbjct:  169 GLKINACSLQQLRRFGEKFPGSEVGIRFNPGLGSGGTGKTNVGGPSSSFGIWHELADDVAAIAEEFDLKVVRIHTHIGSGSDPAVWQRVSGMSLDLVRRFPDVSILNLGGGYKVGRMSDEGSTDLSVVGAPVKDQFVAFAEETGRELHLEIEPGTFLVANAGAVVCSVQDKVTTGSEGHTFLKLDAGMTDVLRPSLYGAQHPLVVVSSEPSRDADESTESVVVVGHCCESGDLLSCAPGEPETIDERAMKAAMCGDLL 426          
BLAST of mRNA_H-paniculata_contig16585.3734.1 vs. uniprot
Match: D5EK78_CORAD (Diaminopimelate decarboxylase n=1 Tax=Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865 / 04OKA010-24) TaxID=583355 RepID=D5EK78_CORAD)

HSP 1 Score: 340 bits (873), Expect = 3.500e-113
Identity = 165/255 (64.71%), Postives = 194/255 (76.08%), Query Frame = 1
Query:    1 GVGINACSLSQLRRLSEEAPGSSIGVRFNPGMGSGGTKRTNVGGPASSFGVWHEWVDEVKEICAAGDLKVVRVHTHIGSGSDPAVWQKVSRMSLELVRQFPDVVTLNLGGGYKTGRMLGEASTDLQAIGAPVRADFESFAEKTGRELKLEIEPGTFLVANAGSLVCTVQDIVSTGQSGNEFIKLDAGMTELLRPSLYGALHPIVVVPSKGVGGGKGPTAEYVVVGHCCESGDLLTPVSGSAEEIDRRVLDKAEIG 765
            G+ INACSLSQL R  +  PG SIGVRFNPG GSGG  RTNVGGPASSFG+WHEW+D+V+EI A  DLKV+R+HTHIGSGSDP VWQK+S MSLELVRQFPDVV+LNLGGGYK  RM  E STDLQ  G PV   F  FA +TGRE++LEIEPGT+L+ANA S++  VQD VSTG+ G EF+KL+ GMTE+LRPS+YGA HPI ++           T +Y++ GHCCESGD+LTP SG  E +  R L   EIG
Sbjct:  114 GIEINACSLSQLERFGQAFPGRSIGVRFNPGAGSGGNNRTNVGGPASSFGIWHEWIDQVQEIVARYDLKVIRIHTHIGSGSDPKVWQKISSMSLELVRQFPDVVSLNLGGGYKVARMADEVSTDLQQCGEPVADKFREFAAETGREIRLEIEPGTYLLANACSVLSMVQDKVSTGREGYEFLKLNTGMTEVLRPSIYGAQHPIFILKEAT----PTETCDYMIAGHCCESGDILTPASGDPELLATRTLPVTEIG 364          
BLAST of mRNA_H-paniculata_contig16585.3734.1 vs. uniprot
Match: A0A6N4WYV1_9BACT (Diaminopimelate decarboxylase (EC) n=3 Tax=Verrucomicrobia TaxID=74201 RepID=A0A6N4WYV1_9BACT)

HSP 1 Score: 338 bits (868), Expect = 2.000e-112
Identity = 162/255 (63.53%), Postives = 192/255 (75.29%), Query Frame = 1
Query:    1 GVGINACSLSQLRRLSEEAPGSSIGVRFNPGMGSGGTKRTNVGGPASSFGVWHEWVDEVKEICAAGDLKVVRVHTHIGSGSDPAVWQKVSRMSLELVRQFPDVVTLNLGGGYKTGRMLGEASTDLQAIGAPVRADFESFAEKTGRELKLEIEPGTFLVANAGSLVCTVQDIVSTGQSGNEFIKLDAGMTELLRPSLYGALHPIVVVPSKGVGGGKGPTAEYVVVGHCCESGDLLTPVSGSAEEIDRRVLDKAEIG 765
            G+ INACSL+QL R  +  PG SIGVRFNPG GSGG  RTNVGGPASSFG+WHEW+D+V+ I A  DLKV+R+HTHIGSGSDPAVWQK+S MSLELVRQFPDVV LNLGGGYK  RM  E  TDLQ  GAPV   F  FA++TGRE++LE+EPGT+L+AN  S++ TVQDIVSTG  G EF+KL+ GMTE+LRPS+YGA HPI ++ +         T  Y++ GHCCESGD+LTP  G  E +  R L    IG
Sbjct:  114 GIEINACSLNQLERFGQACPGKSIGVRFNPGSGSGGNNRTNVGGPASSFGIWHEWIDQVQAIVAQYDLKVIRIHTHIGSGSDPAVWQKISGMSLELVRQFPDVVALNLGGGYKVARMEDEVGTDLQECGAPVAEKFREFAKETGREIRLEVEPGTYLLANTCSVLSTVQDIVSTGADGYEFLKLNTGMTEILRPSIYGAQHPIYILQADA----PAETRNYMIAGHCCESGDILTPAPGDPELLATRSLPVCTIG 364          
BLAST of mRNA_H-paniculata_contig16585.3734.1 vs. uniprot
Match: A0A4D9D992_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D992_9STRA)

HSP 1 Score: 340 bits (871), Expect = 4.420e-112
Identity = 170/255 (66.67%), Postives = 197/255 (77.25%), Query Frame = 1
Query:    1 GVGINACSLSQLRRLSEEAPGSSIGVRFNPGMGSGGTKRTNVGGPASSFGVWHEWVDEVKEICAAGDLKVVRVHTHIGSGSDPAVWQKVSRMSLELVRQFPDVVTLNLGGGYKTGRMLGEASTDLQAIGAPVRADFESFAEKTGRELKLEIEPGTFLVANAGSLVCTVQDIVSTGQSGNEFIKLDAGMTELLRPSLYGALHPIVVVPSKGVGGGKGPTAEYVVVGHCCESGDLLTPVSGSAEEIDRRVLDKAEIG 765
            GV INACS+SQL+R  E  PG  IG+RFNPG+GSGGT +TNVGGP+S+FG+WHE + EVK + A   L+VVRVHTHIGSGSDPAVWQ V+ +SL+LVR+FP V TLNLGGGYK GRM  E STDL  IGAPV+  FE FA +TGR+L LEIEPGTFLVANAG+LVC VQD  ST  S + F+KLDAGMTE+LRPSLYGA HP+VV+P       +   A YVVVGHCCESGDLLTP  G A+ +  R L  AEIG
Sbjct:  168 GVHINACSISQLQRFGERCPGGKIGLRFNPGVGSGGTGKTNVGGPSSAFGIWHELLPEVKRVVAEHKLQVVRVHTHIGSGSDPAVWQNVAALSLDLVREFPQVETLNLGGGYKVGRMRQEQSTDLAKIGAPVKEKFEDFALETGRKLHLEIEPGTFLVANAGALVCRVQDKTST--SAHTFLKLDAGMTEVLRPSLYGAQHPLVVIPKDRTRADR--AASYVVVGHCCESGDLLTPAPGEADTVSERELTSAEIG 418          
BLAST of mRNA_H-paniculata_contig16585.3734.1 vs. uniprot
Match: A0A355SVJ7_9BACT (Diaminopimelate decarboxylase n=1 Tax=Opitutae bacterium TaxID=2026771 RepID=A0A355SVJ7_9BACT)

HSP 1 Score: 335 bits (859), Expect = 4.610e-111
Identity = 159/255 (62.35%), Postives = 192/255 (75.29%), Query Frame = 1
Query:    1 GVGINACSLSQLRRLSEEAPGSSIGVRFNPGMGSGGTKRTNVGGPASSFGVWHEWVDEVKEICAAGDLKVVRVHTHIGSGSDPAVWQKVSRMSLELVRQFPDVVTLNLGGGYKTGRMLGEASTDLQAIGAPVRADFESFAEKTGRELKLEIEPGTFLVANAGSLVCTVQDIVSTGQSGNEFIKLDAGMTELLRPSLYGALHPIVVVPSKGVGGGKGPTAEYVVVGHCCESGDLLTPVSGSAEEIDRRVLDKAEIG 765
            G+ INACSLSQL R  E  PG +IG+RFNPG GSGG  RTNVGGPASSFG+WH W+D+VK I     LKVVR+HTHIGSGSDPAVWQK+S +SL++VRQFP+VV LNLGGGYK  RM  E  TDLQA GAPV   F  FA++TGRE++LEIEPGT+L+ANA S++  VQDIVSTG  G EF+KL+ GMTE+LRPS+YGA HPI ++  +        T +Y++ GHCCESGD+LTP +G  E +  R L    IG
Sbjct:  114 GIEINACSLSQLERFGEACPGRAIGLRFNPGSGSGGNNRTNVGGPASSFGIWHAWIDQVKAIVERYQLKVVRIHTHIGSGSDPAVWQKISELSLDMVRQFPEVVALNLGGGYKVARMADEVGTDLQACGAPVAEKFREFAKETGREIRLEIEPGTYLLANACSVLSVVQDIVSTGADGYEFLKLNTGMTEILRPSIYGAQHPIFILQGEAAAA----TCDYMIAGHCCESGDILTPAAGDPELLATRSLPVCRIG 364          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16585.3734.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FY10_ECTSI1.640e-15182.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JSP9_9PHAE1.080e-14581.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3C547_9VIRI2.160e-12068.22Hypothetical protein n=1 Tax=Prasinoderma singular... [more]
A0A7S1XR44_9STRA1.730e-11666.67Hypothetical protein (Fragment) n=3 Tax=Phaeomonas... [more]
A0A7R9Y6N3_9VIRI3.490e-11667.83Hypothetical protein n=1 Tax=Prasinoderma colonial... [more]
A0A7S2SXD7_9STRA1.970e-11465.50Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
D5EK78_CORAD3.500e-11364.71Diaminopimelate decarboxylase n=1 Tax=Coraliomarga... [more]
A0A6N4WYV1_9BACT2.000e-11263.53Diaminopimelate decarboxylase (EC) n=3 Tax=Verruco... [more]
A0A4D9D992_9STRA4.420e-11266.67Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A355SVJ7_9BACT4.610e-11162.35Diaminopimelate decarboxylase n=1 Tax=Opitutae bac... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16585contigH-paniculata_contig16585:280..4904 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score436.0
Seed ortholog evalue1.2e-119
Seed eggNOG ortholog2880.D7FY10
KEGG rclassRC00299
KEGG koko:K01586,ko:K01611,ko:K18408
KEGG ReactionR00178,R00451
KEGG Pathwayko00270,ko00300,ko00330,ko01100,ko01110,ko01120,ko01130,ko01230,map00270,map00300,map00330,map01100,map01110,map01120,map01130,map01230
KEGG ModuleM00016,M00034,M00133,M00525,M00526,M00527
Hectar predicted targeting categoryother localisation
EggNOG free text desc.putrescine biosynthetic process from ornithine
EggNOG OGsCOG0019@1,KOG0622@2759
Ec32 ortholog descriptionPLP-binding barrel
Ec32 orthologEc-09_002360.1
EC3.6.4.13,4.1.1.20,4.1.1.50
COG Functional cat.E
BiGG ReactioniG2583_1286.G2583_3495
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03036
Exons5
Model size783
Cds size783
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16585.3734.1prot_H-paniculata_contig16585.3734.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig16585 280..4904 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929317.002203-CDS-H-paniculata_contig16585:279..4271622929317.002203-CDS-H-paniculata_contig16585:279..427Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16585 280..427 +
1691480812.9514558-CDS-H-paniculata_contig16585:279..4271691480812.9514558-CDS-H-paniculata_contig16585:279..427Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16585 280..427 +
1622929317.0156617-CDS-H-paniculata_contig16585:1492..16831622929317.0156617-CDS-H-paniculata_contig16585:1492..1683Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16585 1493..1683 +
1691480812.9706929-CDS-H-paniculata_contig16585:1492..16831691480812.9706929-CDS-H-paniculata_contig16585:1492..1683Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16585 1493..1683 +
1622929317.029601-CDS-H-paniculata_contig16585:2705..28731622929317.029601-CDS-H-paniculata_contig16585:2705..2873Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16585 2706..2873 +
1691480812.9862864-CDS-H-paniculata_contig16585:2705..28731691480812.9862864-CDS-H-paniculata_contig16585:2705..2873Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16585 2706..2873 +
1622929317.040924-CDS-H-paniculata_contig16585:3342..34621622929317.040924-CDS-H-paniculata_contig16585:3342..3462Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16585 3343..3462 +
1691480812.9963927-CDS-H-paniculata_contig16585:3342..34621691480812.9963927-CDS-H-paniculata_contig16585:3342..3462Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16585 3343..3462 +
1622929317.050988-CDS-H-paniculata_contig16585:4748..49041622929317.050988-CDS-H-paniculata_contig16585:4748..4904Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16585 4749..4904 +
1691480813.0065055-CDS-H-paniculata_contig16585:4748..49041691480813.0065055-CDS-H-paniculata_contig16585:4748..4904Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16585 4749..4904 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig16585.3734.1

>prot_H-paniculata_contig16585.3734.1 ID=prot_H-paniculata_contig16585.3734.1|Name=mRNA_H-paniculata_contig16585.3734.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=261bp
GVGINACSLSQLRRLSEEAPGSSIGVRFNPGMGSGGTKRTNVGGPASSFG
VWHEWVDEVKEICAAGDLKVVRVHTHIGSGSDPAVWQKVSRMSLELVRQF
PDVVTLNLGGGYKTGRMLGEASTDLQAIGAPVRADFESFAEKTGRELKLE
IEPGTFLVANAGSLVCTVQDIVSTGQSGNEFIKLDAGMTELLRPSLYGAL
HPIVVVPSKGVGGGKGPTAEYVVVGHCCESGDLLTPVSGSAEEIDRRVLD
KAEIGGCISH*
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mRNA from alignment at H-paniculata_contig16585:280..4904+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig16585.3734.1 ID=mRNA_H-paniculata_contig16585.3734.1|Name=mRNA_H-paniculata_contig16585.3734.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4625bp|location=Sequence derived from alignment at H-paniculata_contig16585:280..4904+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGTGTGGGTATCAACGCCTGTTCTCTGAGCCAGCTGCGCAGGCTGAGCGA GGAGGCCCCGGGCAGCTCGATCGGGGTCCGTTTCAACCCGGGTATGGGAT CCGGCGGGACAAAGAGGACGAACGTGGGTGGACCCGCCTCGTCGTTTGGT ACGTTTTTGTTTTTTTTTCGAGGGCTTGTCACCGATTCGTGTTTTCTTGT TCGTGTTTTGTCCTGTACGATTAATGAGATAGATAACACAAGGGGGTTGT CAGTGAGGTTAACAGTCCCCTTGTGTACATCTGGCAGCGGGGCTGCATTG CCACTACGTACTATATATACAGGCGTTGTCTCTTGTCGTGTGTAAGCGCA GAAACGCTTATGCCTTCCCATGTGTTCAGCATGGTTCGTCTGCGGTTCGT CTGGGGACTGCGGCACTTGAAGGGTTGGTGTTTTTGTATTTGTTTTTGTT GTTCGTCGTGGTGTGGCTTGGCGTGGCATTAACTTTTTGATGATGCTGTC AATCGTTTTGTTTTTTTTAATCCCATGCTATCGTGTTTCACTCAGTCGAA TCCCGTTGGGTATAAGGTAGACCGCACCGCGCACATTACATAAGCGTATA ACACAAGGAAGTAGCACCGGTATATCCAACAAATATACAATTGGATTATG AGCATTACGCAGCTACCATTACTCGCTGCAGATTCAGGTCGTCTGTTACG CACACTAGGCCAATTTATAGCTTTATCCCTTCCTGCTTAGTAACACGCAG TCTCCCTGCTTGTTTCTCTCGACAGAATATTACTTCCATTGTTGTTTTTT GTGGTTACCGGGGTATATTTCGTTCTTATCGTTTTAGTCATGTTCCAATG TGGTAGTTCCTGGGGGTTACCGGATTGTTGTTGCTTTTGTTGCTGTGCTA TGCTGTAATAATATCGCATTTGGTTCTTGGGGTTACCAGGGCGGTGTTTG GTTCTGCTTTTGGTGGTGTGCTGGTTATTTATTATATACCTCGATGTATC GTAATGTGTTGGCGTTACCGGACCTTGCTTCGTTTCTTGTTTTTTTGCTT AGACCATGTGCTGTTGTACTTGACGCTACTCTCCTCTGCTGTTTTGTAGG TGAGCGCGGGCTCTATCGGGTATACCCTGTGCAATTCCCGTTTTGCCATG TTGATGCTGTTTTGTATGTGGTCATTGATGGTGTTGTTCGTGTGTTGCTA TTTTCGTCCCCAGGCGTGTGGCACGAGTGGGTGGACGAGGTGAAGGAGAT TTGCGCCGCGGGCGACCTCAAGGTTGTGCGCGTCCACACTCACATCGGCT CTGGCTCCGATCCCGCCGTCTGGCAAAAGGTGTCGCGCATGAGCCTGGAA CTTGTGCGCCAATTTCCTGACGTGGTGACGCTCAACCTTGGTGGTGGTTA CAAGGTATCTCTCTGTCTTTCTCTCTCTATATTTTATCTATATATCTATT TTTGCTCGAGTAGTGTACTCCCCTAATAAATGTGCTTGATTCCCGTAATA TCTTGGGGAATTTTTGTGGATAAGTAATGGAGAAACTTGAAAATGGTCAA CATACCTCTTACATTTTTTCAAGGTCTGTAGTCATTTTTTTTTTTTTTTT TTTACTTTTGTGACTTGCTTTTTTTTTTGTATGGTGCTTTTCACTTCTAT TTCTGTTATCTAATTTCCAAAAGCATGCCCTCTTATTTAGTTGTTGTATA TGGTTCCGGTCCTGCTGGCGAACAAGCTGTCCTTGTAACTGGTGCGTATT GTGATGTGATGTTGCTATGCTCCAACCGTCCTAGTTTCGTTCAGTTTGTG ATGAGTCCTGCAGCAACTTGAAGATGTCTCAGCATACATCCTTATTGTGG TATGGTCATCGTCATGTTTTTACATTAACAGTATCGGCCCCGTGTATATT AGAAACTCTTGTGTCGGGGAAGGCTCAAAACTTCCCTTTCTTTGGCAAGA ATTATGAACTGTACTTTTTCTCATTTTTATATGTAGGAATTAGAATAAGT TCACAATTTGAGCCCCAATTTCTCCAATCGGATTTCTTATACCTTGGAAA AAAAAATTGCATCTCAAATTCTTAATTGAGTGATGATTTCTTGTCAACGG GCCCACCTGTATTACGCAACTTGACATTTTTGCTTGCCTACGTTTTTACT GAAGAAAAATTTACTCCATCACTCCATCACTCCACCATTATTACTCTACA GCATTTTTTCCAAACCGTCTAATCGCAATTTAGTGCAGACGCTGTCCAGC TAGTGAAGCTGTCCTCGGCAATTGGCGCATGTAGTGATGTCGCTATGTTT GTCGTTAGTGGTGGATAACCCCCCTCCCCCCTTTAACTTTGTTCGTTTGT TCTTTCCCCGCGCCGAATGAACTAATACTTAATGCACGGATATGAAACAC GATAATACAACTATTTATATGTGCAGACCGGGCGAATGTTGGGAGAAGCC TCAACGGATCTCCAGGCCATTGGCGCGCCGGTGCGGGCGGACTTCGAAAG TTTCGCCGAGAAGACCGGCCGAGAACTGAAGCTGGAGATCGAGCCCGGGA CGTTTTTGGTGGCCAACGCGGGCAGCTTGGTGTGCACCGTGCAGGTGGGG AAGGCGTGCGTATATACTATATACTATAGTGCTAGCCCCAGCCCGCCTCA TGCCTCGTGTAAAAACTTGATAAAAGGGGATAGATTCTCGAATGGCAGGT GGGTATGGTAGGTACGTGTACACAAGAGGATGTTGGATTTTTTTTAGATA CTCCCCTGACTTGCTCTTTGCAAGGCAGACAGGTCGAAACCCCGAGGCGT GTCAGTCACACCACGCCCCGTGAACCCAGAGAGAAAAAACCTCGTTTGTA TAAGTGTGTGTGGTCATATCAGTTACGATCATCACATTGCTTGAGAGTAA TGACCCTCTGCGTTGATCTGTTGATTGATCTATTGATTGATTGATTGATT GATTGATTGATTATTATGGCATATTTTCTATTCGTAGTAATTGAAAGGAC GTGTATATATTCACCTCCATCCTCCCCACTTCTATCGCGCAATACGTAAT GGGCCATTTATAGGATATTGTCAGCACGGGCCAGTCAGGCAACGAGTTTA TCAAGCTTGACGCAGGGATGACGGAGCTGCTTCGACCGTCGCTCTATGGC GCTCTTCATCCTATCGTCGTGGTCCCGTCCAAGGTAATGTTTGTTTTTTT CACCCTTCCTTGGCTCTGTTAAGCGGGGAGTGCCGTTATTTTTGTGGAAC TTTGGAACCCTTCGATATGGCTGCTTGGGAACAAAAAACGAAGAGGATGT AACGGTGACTGTCGAGCGCTGCTGTAGTCGGTTTTGCTCGGTTGTGTGCA GGCAGAGCCATGTCTCAAACAAGTACACCCCTTATCGTTCTCTGTGCTTT GTCAGTAGTGTACTGGACTAACTGCCTCAACAGCAACAATTGCTTTCCTC ACCTCCGCAAGTCGTGACATAAACATAGATAGATGAATGAATATAGATAG GCCTTGTTTTCTACCTCTTCTTTCACGCGGTTGGGGGCTAAATGGAGATT CTGTGAACACTGGTGCCCAACTGCATGAGCAGAATGTTTTCGCACGTCCG ATGTATTTAAATTGGTGTATTAGGCGTTTTTTGCGCACGTCCCAGAGAAC AGCGCCTCGTCGTTGTAGAACTCCGTGGCGGAACACGGTACAGACTTCCT GGTAGACATCACAGAACAGCCAGAAAGATTCTTCGTGCCGAGTAAATCAA CACAACAGTATGTATTGTTCTAGAACGTGTTTTAGAACAGTTGCATTAGC GCCGGTGTATTTCATTGTTTTGTCATGTTCTGTTCTGTTATGTTCTGTTG TATATTCTCATATTATGTTATGTTCTGGTATAATCTGTTCTGATCTGTTC TGTTCTGATCTGTCGGACGTATGAAGGTTACACATCACTGTCTATGATTT GAATGTATTAAACTTGACGCCAAGAAAGAACATATCGGGAAGAGAGCTAG CCTGCCTTGCCGCACGAGTTATTCGTAGGTTCTCCGCAGTTTCCACGACT AGGATTCGCGCTCGTGGCAGCACTCCTTGAGGGTTACATCAAATTGACCG TATTAGTCGGCTCGTATTACTCATCGCCTTTTCGGGAAATTAGTAATGTA AATGACTCAGCACCTATTTTATTTCGGGGAAATTAATCGTTCTTATGAGT CCACCAACGTTCGTCGCATTTTGAGGGAATTAGTTGTTCGTATGAGTCAA CTGCCTACGGCTAGTTGGTTCGTCGTGGGAACTGCGGCGTCTTCCCACGA TATTGGGGTAACTATTGCAGCATGGCACTCTCCCGAGGGAGGCTGCCCAT GGATTTTGGCCGCGTTAACTTCTTCTCTCGATATATATATATTTTTTGAT GCGATCTATCGTCTGTGCGGTCGGCTTGGTTCTACTCTGCGTGTTGCTCT GTTGGTGCTGGTTATCCAGGGTGTTGGAGGGGGCAAGGGGCCCACGGCAG AATATGTTGTCGTCGGGCACTGCTGCGAGTCGGGCGACTTGTTGACGCCC GTGTCGGGGTCGGCCGAAGAGATCGACCGACGGGTCCTGGATAAGGCTGA GATTGGTGGGTGCATTTCCCATTAG
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Coding sequence (CDS) from alignment at H-paniculata_contig16585:280..4904+

>mRNA_H-paniculata_contig16585.3734.1 ID=mRNA_H-paniculata_contig16585.3734.1|Name=mRNA_H-paniculata_contig16585.3734.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1566bp|location=Sequence derived from alignment at H-paniculata_contig16585:280..4904+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGTGTGGGTATCAACGCCTGTTCTCTGAGCCAGCTGCGCAGGCTGAGCGA
GGAGGCCCCGGGCAGCTCGATCGGGGTCCGTTTCAACCCGGGTATGGGAT
CCGGCGGGACAAAGAGGACGAACGTGGGTGGACCCGCCTCGTCGTTTGGG
TGTGGGTATCAACGCCTGTTCTCTGAGCCAGCTGCGCAGGCTGAGCGAGG
AGGCCCCGGGCAGCTCGATCGGGGTCCGTTTCAACCCGGGTATGGGATCC
GGCGGGACAAAGAGGACGAACGTGGGTGGACCCGCCTCGTCGTTTGGCGT
GTGGCACGAGTGGGTGGACGAGGTGAAGGAGATTTGCGCCGCGGGCGACC
TCAAGGTTGTGCGCGTCCACACTCACATCGGCTCTGGCTCCGATCCCGCC
GTCTGGCAAAAGGTGTCGCGCATGAGCCTGGAACTTGTGCGCCAATTTCC
TGACGTGGTGACGCTCAACCTTGGTGGTGGTTACAAGGCGTGTGGCACGA
GTGGGTGGACGAGGTGAAGGAGATTTGCGCCGCGGGCGACCTCAAGGTTG
TGCGCGTCCACACTCACATCGGCTCTGGCTCCGATCCCGCCGTCTGGCAA
AAGGTGTCGCGCATGAGCCTGGAACTTGTGCGCCAATTTCCTGACGTGGT
GACGCTCAACCTTGGTGGTGGTTACAAGACCGGGCGAATGTTGGGAGAAG
CCTCAACGGATCTCCAGGCCATTGGCGCGCCGGTGCGGGCGGACTTCGAA
AGTTTCGCCGAGAAGACCGGCCGAGAACTGAAGCTGGAGATCGAGCCCGG
GACGTTTTTGGTGGCCAACGCGGGCAGCTTGGTGTGCACCGTGCAGACCG
GGCGAATGTTGGGAGAAGCCTCAACGGATCTCCAGGCCATTGGCGCGCCG
GTGCGGGCGGACTTCGAAAGTTTCGCCGAGAAGACCGGCCGAGAACTGAA
GCTGGAGATCGAGCCCGGGACGTTTTTGGTGGCCAACGCGGGCAGCTTGG
TGTGCACCGTGCAGGATATTGTCAGCACGGGCCAGTCAGGCAACGAGTTT
ATCAAGCTTGACGCAGGGATGACGGAGCTGCTTCGACCGTCGCTCTATGG
CGCTCTTCATCCTATCGTCGTGGTCCCGTCCAAGGATATTGTCAGCACGG
GCCAGTCAGGCAACGAGTTTATCAAGCTTGACGCAGGGATGACGGAGCTG
CTTCGACCGTCGCTCTATGGCGCTCTTCATCCTATCGTCGTGGTCCCGTC
CAAGGGTGTTGGAGGGGGCAAGGGGCCCACGGCAGAATATGTTGTCGTCG
GGCACTGCTGCGAGTCGGGCGACTTGTTGACGCCCGTGTCGGGGTCGGCC
GAAGAGATCGACCGACGGGTCCTGGATAAGGCTGAGATTGGTGGGTGCAT
TTCCCATTAGGGTGTTGGAGGGGGCAAGGGGCCCACGGCAGAATATGTTG
TCGTCGGGCACTGCTGCGAGTCGGGCGACTTGTTGACGCCCGTGTCGGGG
TCGGCCGAAGAGATCGACCGACGGGTCCTGGATAAGGCTGAGATTGGTGG
GTGCATTTCCCATTAG
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