mRNA_H-paniculata_contig16585.3734.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig16585.3734.1 vs. uniprot
Match: D7FY10_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY10_ECTSI) HSP 1 Score: 434 bits (1115), Expect = 1.640e-151 Identity = 212/258 (82.17%), Postives = 232/258 (89.92%), Query Frame = 1
Query: 1 GVGINACSLSQLRRLSEEAPGSSIGVRFNPGMGSGGTKRTNVGGPASSFGVWHEWVDEVKEICAAGDLKVVRVHTHIGSGSDPAVWQKVSRMSLELVRQFPDVVTLNLGGGYKTGRMLGEASTDLQAIGAPVRADFESFAEKTGRELKLEIEPGTFLVANAGSLVCTVQDIVSTGQSGNEFIKLDAGMTELLRPSLYGALHPIVVVPSKGVGGGKGPTAEYVVVGHCCESGDLLTPVSGSAEEIDRRVLDKAEIGGCI 774
GV INACSLSQLR+++EEAPGSS+GVRFNPG+GSGGTK TNVGGP+SSFG+W+EW DEVKEICA GDL V R+HTHIGSGSDPAVWQKVS MSL+LVRQFP V TLNLGGGYK GRM GE STDLQAIGAPV DFE+FAE+TGR+LKLEIEPGTFLVANAGSLVCT QD+VSTG G EFIKLDAGMTELLRPSLYGALHPIVVVP++G GGG+ TAEYVVVGHCCESGDLLTPVSG+A EI+RR L KAEIG +
Sbjct: 2 GVDINACSLSQLRKIAEEAPGSSVGVRFNPGLGSGGTKSTNVGGPSSSFGIWYEWADEVKEICAGGDLTVSRIHTHIGSGSDPAVWQKVSGMSLDLVRQFPTVTTLNLGGGYKVGRMSGEQSTDLQAIGAPVMGDFEAFAEETGRKLKLEIEPGTFLVANAGSLVCTAQDLVSTGSGGYEFIKLDAGMTELLRPSLYGALHPIVVVPAEGEGGGE--TAEYVVVGHCCESGDLLTPVSGAASEIERRTLAKAEIGDLV 257
BLAST of mRNA_H-paniculata_contig16585.3734.1 vs. uniprot
Match: A0A6H5JSP9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSP9_9PHAE) HSP 1 Score: 429 bits (1102), Expect = 1.080e-145 Identity = 210/258 (81.40%), Postives = 229/258 (88.76%), Query Frame = 1
Query: 1 GVGINACSLSQLRRLSEEAPGSSIGVRFNPGMGSGGTKRTNVGGPASSFGVWHEWVDEVKEICAAGDLKVVRVHTHIGSGSDPAVWQKVSRMSLELVRQFPDVVTLNLGGGYKTGRMLGEASTDLQAIGAPVRADFESFAEKTGRELKLEIEPGTFLVANAGSLVCTVQDIVSTGQSGNEFIKLDAGMTELLRPSLYGALHPIVVVPSKGVGGGKGPTAEYVVVGHCCESGDLLTPVSGSAEEIDRRVLDKAEIGGCI 774
GV INACSLSQLRR++EEAPGSS+GVRFNPG+GSGGTK TNVGGP+SSFG+W+EW DEVKEICA GDL V R+HTHIGSGSDPAVWQKVS MSL+LVRQFP V TLNLGGGYK GRM GE STDLQAIGAPV DFE+FA++TGR+LKLEIEPGTFLVANAGSLVCT QD+VSTG G EFIKLDAGMTELLRPSLYGALHPIVVVP++G G G TAEYVVVGHCCESGDLLTPVSG+A EI+RR L K EIG +
Sbjct: 266 GVDINACSLSQLRRIAEEAPGSSVGVRFNPGLGSGGTKSTNVGGPSSSFGIWYEWADEVKEICAGGDLTVSRIHTHIGSGSDPAVWQKVSGMSLDLVRQFPTVTTLNLGGGYKVGRMSGEQSTDLQAIGAPVMEDFEAFAQETGRKLKLEIEPGTFLVANAGSLVCTAQDLVSTGSGGYEFIKLDAGMTELLRPSLYGALHPIVVVPAEGEG--DGDTAEYVVVGHCCESGDLLTPVSGAASEIERRTLAKVEIGDLV 521
BLAST of mRNA_H-paniculata_contig16585.3734.1 vs. uniprot
Match: A0A7S3C547_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3C547_9VIRI) HSP 1 Score: 357 bits (916), Expect = 2.160e-120 Identity = 176/258 (68.22%), Postives = 204/258 (79.07%), Query Frame = 1
Query: 1 GVGINACSLSQLRRLSEEAPGSSIGVRFNPGMGSGGTKRTNVGGPASSFGVWHEWVDEVKEICAAGDLKVVRVHTHIGSGSDPAVWQKVSRMSLELVRQFPDVVTLNLGGGYKTGRMLGEASTDLQAIGAPVRADFESFAEKTGRELKLEIEPGTFLVANAGSLVCTVQDIVSTGQSGNEFIKLDAGMTELLRPSLYGALHPIVVVPSKGVGGGKGPTAEYVVVGHCCESGDLLTPVSGSAEEIDRRVLDKAEIGGCI 774
GV INACSLSQL+R E PG+ +G+RFNPG+GSGGT +TNVGGP+SSFG+WHE + E + I LKVVR+HTHIGSGSDPAVWQKVS MSL+LVRQFP+V TLNLGGGYK GRM GEASTDL +GAPV F++FAE+TGREL LEIEPGTFL+ANAG+LV TVQD+V+TG +G++FIKLDAGMTE+LRPSLYGA HP+V+V K G YVVVGHCCESGDL+TP E I R L KAE G I
Sbjct: 59 GVKINACSLSQLQRFGEACPGAEVGLRFNPGLGSGGTGKTNVGGPSSSFGIWHELLPETQRIAEEHGLKVVRIHTHIGSGSDPAVWQKVSGMSLDLVRQFPEVATLNLGGGYKVGRMAGEASTDLDVVGAPVADAFKAFAEETGRELHLEIEPGTFLLANAGALVSTVQDVVTTGSTGHDFIKLDAGMTEVLRPSLYGAQHPLVLV--KAGGSAAEGDESYVVVGHCCESGDLMTPAPDEPETITERALGKAECGDLI 314
BLAST of mRNA_H-paniculata_contig16585.3734.1 vs. uniprot
Match: A0A7S1XR44_9STRA (Hypothetical protein (Fragment) n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XR44_9STRA) HSP 1 Score: 348 bits (894), Expect = 1.730e-116 Identity = 170/255 (66.67%), Postives = 198/255 (77.65%), Query Frame = 1
Query: 1 GVGINACSLSQLRRLSEEAPGSSIGVRFNPGMGSGGTKRTNVGGPASSFGVWHEWVDEVKEICAAGDLKVVRVHTHIGSGSDPAVWQKVSRMSLELVRQFPDVVTLNLGGGYKTGRMLGEASTDLQAIGAPVRADFESFAEKTGRELKLEIEPGTFLVANAGSLVCTVQDIVSTGQSGNEFIKLDAGMTELLRPSLYGALHPIVVVPSKGVGGGKGPTAEYVVVGHCCESGDLLTPVSGSAEEIDRRVLDKAEIG 765
G+ +NACS+ QL+R PG+ +G+RFNPG+GSGGT +TNVGGP SSFG+WHE DE EI A V R+HTHIGSGSDPAVWQ+VS MSL+L R+FPDVVTLNLGGGYK GRM+GEASTDL +GAPV+A FE+FA TGREL+LEIEPGTFL+ANA SL+C VQD+V+TG +G +FIKLDAGMTE+LRPSLYGA HP+V +P G YVVVGHCCESGDLLTP G E I R L K EIG
Sbjct: 160 GIKVNACSVEQLKRYVGALPGTPVGLRFNPGLGSGGTGKTNVGGPDSSFGIWHELADECAEIAGATGTPVERIHTHIGSGSDPAVWQRVSGMSLDLCRRFPDVVTLNLGGGYKVGRMIGEASTDLGVVGAPVKAAFEAFAADTGRELRLEIEPGTFLLANACSLLCGVQDVVTTGAAGRKFIKLDAGMTEVLRPSLYGAQHPLVTIPKAQTG----EFENYVVVGHCCESGDLLTPAPGEPETIAERSLSKVEIG 410
BLAST of mRNA_H-paniculata_contig16585.3734.1 vs. uniprot
Match: A0A7R9Y6N3_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9Y6N3_9VIRI) HSP 1 Score: 349 bits (896), Expect = 3.490e-116 Identity = 175/258 (67.83%), Postives = 201/258 (77.91%), Query Frame = 1
Query: 1 GVGINACSLSQLRRLSEEAPGSSIGVRFNPGMGSGGTKRTNVGGPASSFGVWHEWVDEVKEICAAGDLKVVRVHTHIGSGSDPAVWQKVSRMSLELVRQFPDVVTLNLGGGYKTGRMLGEASTDLQAIGAPVRADFESFAEKTGRELKLEIEPGTFLVANAGSLVCTVQDIVSTGQSGNEFIKLDAGMTELLRPSLYGALHPIVVVPSKGVGGGKGPTAEYVVVGHCCESGDLLTPVSGSAEEIDRRVLDKAEIGGCI 774
GV +NACSL QLRR PG +G+RFNPG+GSGGT +TNVGGP+SSFG+WHE + E +EI AA DLKVVR+HTHIGSGSDPAVWQKVS MSL+L RQFPDV LNLGGGYK GRM EASTDLQ +G PV F +FAE+TGREL LEIEPGTFL+ANAG+LV VQD+VSTG G+ FIKLD+GMTE+LRPSLYGA HPIV+V + G +G + YVVVGHCCESGDL+TP E I R L AE+G I
Sbjct: 143 GVKVNACSLEQLRRFGAAFPGGEVGLRFNPGLGSGGTGKTNVGGPSSSFGIWHESLPECQEIAAAHDLKVVRIHTHIGSGSDPAVWQKVSGMSLDLCRQFPDVTHLNLGGGYKVGRMSYEASTDLQVVGEPVTDAFRAFAEETGRELALEIEPGTFLLANAGALVTAVQDVVSTGAEGHNFIKLDSGMTEVLRPSLYGAQHPIVLVKNGGTAA-EGDES-YVVVGHCCESGDLMTPAPDEPEVITERALGAAEVGDLI 398
BLAST of mRNA_H-paniculata_contig16585.3734.1 vs. uniprot
Match: A0A7S2SXD7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SXD7_9STRA) HSP 1 Score: 346 bits (887), Expect = 1.970e-114 Identity = 169/258 (65.50%), Postives = 199/258 (77.13%), Query Frame = 1
Query: 1 GVGINACSLSQLRRLSEEAPGSSIGVRFNPGMGSGGTKRTNVGGPASSFGVWHEWVDEVKEICAAGDLKVVRVHTHIGSGSDPAVWQKVSRMSLELVRQFPDVVTLNLGGGYKTGRMLGEASTDLQAIGAPVRADFESFAEKTGRELKLEIEPGTFLVANAGSLVCTVQDIVSTGQSGNEFIKLDAGMTELLRPSLYGALHPIVVVPSKGVGGGKGPTAEYVVVGHCCESGDLLTPVSGSAEEIDRRVLDKAEIGGCI 774
G+ INACSL QLRR E+ PGS +G+RFNPG+GSGGT +TNVGGP+SSFG+WHE D+V I DLKVVR+HTHIGSGSDPAVWQ+VS MSL+LVR+FPDV LNLGGGYK GRM E STDL +GAPV+ F +FAE+TGREL LEIEPGTFLVANAG++VC+VQD V+TG G+ F+KLDAGMT++LRPSLYGA HP+VVV S+ T VVVGHCCESGDLL+ G E ID R + A G +
Sbjct: 169 GLKINACSLQQLRRFGEKFPGSEVGIRFNPGLGSGGTGKTNVGGPSSSFGIWHELADDVAAIAEEFDLKVVRIHTHIGSGSDPAVWQRVSGMSLDLVRRFPDVSILNLGGGYKVGRMSDEGSTDLSVVGAPVKDQFVAFAEETGRELHLEIEPGTFLVANAGAVVCSVQDKVTTGSEGHTFLKLDAGMTDVLRPSLYGAQHPLVVVSSEPSRDADESTESVVVVGHCCESGDLLSCAPGEPETIDERAMKAAMCGDLL 426
BLAST of mRNA_H-paniculata_contig16585.3734.1 vs. uniprot
Match: D5EK78_CORAD (Diaminopimelate decarboxylase n=1 Tax=Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865 / 04OKA010-24) TaxID=583355 RepID=D5EK78_CORAD) HSP 1 Score: 340 bits (873), Expect = 3.500e-113 Identity = 165/255 (64.71%), Postives = 194/255 (76.08%), Query Frame = 1
Query: 1 GVGINACSLSQLRRLSEEAPGSSIGVRFNPGMGSGGTKRTNVGGPASSFGVWHEWVDEVKEICAAGDLKVVRVHTHIGSGSDPAVWQKVSRMSLELVRQFPDVVTLNLGGGYKTGRMLGEASTDLQAIGAPVRADFESFAEKTGRELKLEIEPGTFLVANAGSLVCTVQDIVSTGQSGNEFIKLDAGMTELLRPSLYGALHPIVVVPSKGVGGGKGPTAEYVVVGHCCESGDLLTPVSGSAEEIDRRVLDKAEIG 765
G+ INACSLSQL R + PG SIGVRFNPG GSGG RTNVGGPASSFG+WHEW+D+V+EI A DLKV+R+HTHIGSGSDP VWQK+S MSLELVRQFPDVV+LNLGGGYK RM E STDLQ G PV F FA +TGRE++LEIEPGT+L+ANA S++ VQD VSTG+ G EF+KL+ GMTE+LRPS+YGA HPI ++ T +Y++ GHCCESGD+LTP SG E + R L EIG
Sbjct: 114 GIEINACSLSQLERFGQAFPGRSIGVRFNPGAGSGGNNRTNVGGPASSFGIWHEWIDQVQEIVARYDLKVIRIHTHIGSGSDPKVWQKISSMSLELVRQFPDVVSLNLGGGYKVARMADEVSTDLQQCGEPVADKFREFAAETGREIRLEIEPGTYLLANACSVLSMVQDKVSTGREGYEFLKLNTGMTEVLRPSIYGAQHPIFILKEAT----PTETCDYMIAGHCCESGDILTPASGDPELLATRTLPVTEIG 364
BLAST of mRNA_H-paniculata_contig16585.3734.1 vs. uniprot
Match: A0A6N4WYV1_9BACT (Diaminopimelate decarboxylase (EC) n=3 Tax=Verrucomicrobia TaxID=74201 RepID=A0A6N4WYV1_9BACT) HSP 1 Score: 338 bits (868), Expect = 2.000e-112 Identity = 162/255 (63.53%), Postives = 192/255 (75.29%), Query Frame = 1
Query: 1 GVGINACSLSQLRRLSEEAPGSSIGVRFNPGMGSGGTKRTNVGGPASSFGVWHEWVDEVKEICAAGDLKVVRVHTHIGSGSDPAVWQKVSRMSLELVRQFPDVVTLNLGGGYKTGRMLGEASTDLQAIGAPVRADFESFAEKTGRELKLEIEPGTFLVANAGSLVCTVQDIVSTGQSGNEFIKLDAGMTELLRPSLYGALHPIVVVPSKGVGGGKGPTAEYVVVGHCCESGDLLTPVSGSAEEIDRRVLDKAEIG 765
G+ INACSL+QL R + PG SIGVRFNPG GSGG RTNVGGPASSFG+WHEW+D+V+ I A DLKV+R+HTHIGSGSDPAVWQK+S MSLELVRQFPDVV LNLGGGYK RM E TDLQ GAPV F FA++TGRE++LE+EPGT+L+AN S++ TVQDIVSTG G EF+KL+ GMTE+LRPS+YGA HPI ++ + T Y++ GHCCESGD+LTP G E + R L IG
Sbjct: 114 GIEINACSLNQLERFGQACPGKSIGVRFNPGSGSGGNNRTNVGGPASSFGIWHEWIDQVQAIVAQYDLKVIRIHTHIGSGSDPAVWQKISGMSLELVRQFPDVVALNLGGGYKVARMEDEVGTDLQECGAPVAEKFREFAKETGREIRLEVEPGTYLLANTCSVLSTVQDIVSTGADGYEFLKLNTGMTEILRPSIYGAQHPIYILQADA----PAETRNYMIAGHCCESGDILTPAPGDPELLATRSLPVCTIG 364
BLAST of mRNA_H-paniculata_contig16585.3734.1 vs. uniprot
Match: A0A4D9D992_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D992_9STRA) HSP 1 Score: 340 bits (871), Expect = 4.420e-112 Identity = 170/255 (66.67%), Postives = 197/255 (77.25%), Query Frame = 1
Query: 1 GVGINACSLSQLRRLSEEAPGSSIGVRFNPGMGSGGTKRTNVGGPASSFGVWHEWVDEVKEICAAGDLKVVRVHTHIGSGSDPAVWQKVSRMSLELVRQFPDVVTLNLGGGYKTGRMLGEASTDLQAIGAPVRADFESFAEKTGRELKLEIEPGTFLVANAGSLVCTVQDIVSTGQSGNEFIKLDAGMTELLRPSLYGALHPIVVVPSKGVGGGKGPTAEYVVVGHCCESGDLLTPVSGSAEEIDRRVLDKAEIG 765
GV INACS+SQL+R E PG IG+RFNPG+GSGGT +TNVGGP+S+FG+WHE + EVK + A L+VVRVHTHIGSGSDPAVWQ V+ +SL+LVR+FP V TLNLGGGYK GRM E STDL IGAPV+ FE FA +TGR+L LEIEPGTFLVANAG+LVC VQD ST S + F+KLDAGMTE+LRPSLYGA HP+VV+P + A YVVVGHCCESGDLLTP G A+ + R L AEIG
Sbjct: 168 GVHINACSISQLQRFGERCPGGKIGLRFNPGVGSGGTGKTNVGGPSSAFGIWHELLPEVKRVVAEHKLQVVRVHTHIGSGSDPAVWQNVAALSLDLVREFPQVETLNLGGGYKVGRMRQEQSTDLAKIGAPVKEKFEDFALETGRKLHLEIEPGTFLVANAGALVCRVQDKTST--SAHTFLKLDAGMTEVLRPSLYGAQHPLVVIPKDRTRADR--AASYVVVGHCCESGDLLTPAPGEADTVSERELTSAEIG 418
BLAST of mRNA_H-paniculata_contig16585.3734.1 vs. uniprot
Match: A0A355SVJ7_9BACT (Diaminopimelate decarboxylase n=1 Tax=Opitutae bacterium TaxID=2026771 RepID=A0A355SVJ7_9BACT) HSP 1 Score: 335 bits (859), Expect = 4.610e-111 Identity = 159/255 (62.35%), Postives = 192/255 (75.29%), Query Frame = 1
Query: 1 GVGINACSLSQLRRLSEEAPGSSIGVRFNPGMGSGGTKRTNVGGPASSFGVWHEWVDEVKEICAAGDLKVVRVHTHIGSGSDPAVWQKVSRMSLELVRQFPDVVTLNLGGGYKTGRMLGEASTDLQAIGAPVRADFESFAEKTGRELKLEIEPGTFLVANAGSLVCTVQDIVSTGQSGNEFIKLDAGMTELLRPSLYGALHPIVVVPSKGVGGGKGPTAEYVVVGHCCESGDLLTPVSGSAEEIDRRVLDKAEIG 765
G+ INACSLSQL R E PG +IG+RFNPG GSGG RTNVGGPASSFG+WH W+D+VK I LKVVR+HTHIGSGSDPAVWQK+S +SL++VRQFP+VV LNLGGGYK RM E TDLQA GAPV F FA++TGRE++LEIEPGT+L+ANA S++ VQDIVSTG G EF+KL+ GMTE+LRPS+YGA HPI ++ + T +Y++ GHCCESGD+LTP +G E + R L IG
Sbjct: 114 GIEINACSLSQLERFGEACPGRAIGLRFNPGSGSGGNNRTNVGGPASSFGIWHAWIDQVKAIVERYQLKVVRIHTHIGSGSDPAVWQKISELSLDMVRQFPEVVALNLGGGYKVARMADEVGTDLQACGAPVAEKFREFAKETGREIRLEIEPGTYLLANACSVLSVVQDIVSTGADGYEFLKLNTGMTEILRPSIYGAQHPIFILQGEAAAA----TCDYMIAGHCCESGDILTPAAGDPELLATRSLPVCRIG 364 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16585.3734.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig16585.3734.1 >prot_H-paniculata_contig16585.3734.1 ID=prot_H-paniculata_contig16585.3734.1|Name=mRNA_H-paniculata_contig16585.3734.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=261bp GVGINACSLSQLRRLSEEAPGSSIGVRFNPGMGSGGTKRTNVGGPASSFGback to top mRNA from alignment at H-paniculata_contig16585:280..4904+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig16585.3734.1 ID=mRNA_H-paniculata_contig16585.3734.1|Name=mRNA_H-paniculata_contig16585.3734.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4625bp|location=Sequence derived from alignment at H-paniculata_contig16585:280..4904+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig16585:280..4904+ >mRNA_H-paniculata_contig16585.3734.1 ID=mRNA_H-paniculata_contig16585.3734.1|Name=mRNA_H-paniculata_contig16585.3734.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1566bp|location=Sequence derived from alignment at H-paniculata_contig16585:280..4904+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |