prot_H-paniculata_contig1057.372.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1057.372.1
Unique Nameprot_H-paniculata_contig1057.372.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length149
Homology
BLAST of mRNA_H-paniculata_contig1057.372.1 vs. uniprot
Match: D7FHF7_ECTSI (40S ribosomal protein S12 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHF7_ECTSI)

HSP 1 Score: 253 bits (646), Expect = 1.210e-84
Identity = 122/132 (92.42%), Postives = 127/132 (96.21%), Query Frame = 0
Query:   17 TGAEVTEVKEISVLDALKQVLKKALIFDGLRRGLHECAKVLDRGSARLCCLAKDCDNPEYTQLVRALCDEGSVHLIMVDSRQELGQWAGLCKIGLEGEATKIVPCSCAVVTDYGEQTQALGVLLEHLKKGGE 148
            TG+   EVKEISVLDALK+VLKKALIFDGLRRGLHECAK LDRGSARLCCLAKDCDNPEYTQLVRALCDEG+VHLIMVD+RQELGQWAGLCKIG EGEATKIVPCSCAVVTDYGEQTQALGVLLEHLKKGG+
Sbjct:   10 TGSPEVEVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCDNPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIGAEGEATKIVPCSCAVVTDYGEQTQALGVLLEHLKKGGD 141          
BLAST of mRNA_H-paniculata_contig1057.372.1 vs. uniprot
Match: A0A835YYB7_9STRA (40S ribosomal protein S12 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYB7_9STRA)

HSP 1 Score: 217 bits (553), Expect = 2.060e-70
Identity = 105/148 (70.95%), Postives = 123/148 (83.11%), Query Frame = 0
Query:    1 MVAEDVMAGDGAGENVTGAEVTEVKEISVLDALKQVLKKALIFDGLRRGLHECAKVLDRGSARLCCLAKDCDNPEYTQLVRALCDEGSVHLIMVDSRQELGQWAGLCKIGLEGEATKIVPCSCAVVTDYGEQTQALGVLLEHLKKGGE 148
            M +EDV     A      A+V E   +SV DALK+VLKKALIFDGLRRGLHEC K LDRG+ARLCCLAKDC+NPEYT+LVRALC+EG VH+IMV++RQ+LGQWAGLCKI  EGEATK+VPCSCAVVTD+G ++ AL VL+EHL+KGGE
Sbjct:    1 MSSEDVAEAPAAAAPAPAADVAE---LSVPDALKEVLKKALIFDGLRRGLHECVKALDRGTARLCCLAKDCENPEYTRLVRALCEEGGVHIIMVNTRQQLGQWAGLCKIDAEGEATKVVPCSCAVVTDFGTESPALTVLMEHLRKGGE 145          
BLAST of mRNA_H-paniculata_contig1057.372.1 vs. uniprot
Match: A0A7S2CVX4_9STRA (40S ribosomal protein S12 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CVX4_9STRA)

HSP 1 Score: 193 bits (491), Expect = 5.890e-61
Identity = 92/137 (67.15%), Postives = 113/137 (82.48%), Query Frame = 0
Query:   10 DGAGENVTGAEV--TEVKEISVLDALKQVLKKALIFDGLRRGLHECAKVLDRGSARLCCLAKDCDNPEYTQLVRALCDEGSVHLIMVDSRQELGQWAGLCKIGLEGEATKIVPCSCAVVTDYGEQTQALGVLLEHLK 144
            D   E    AE    EV+E+ VLDALK+VLKKAL+ DGL RGLHECAK LD+ +A+LCCLAKDCDNPEYT+LVRALC+EG V+L+MVD+ ++LG+W GLCKI  EGEATK+V CSCAV+T++GE++QAL VLLE LK
Sbjct:    5 DAVMETAEAAETEEVEVEEMGVLDALKEVLKKALVHDGLSRGLHECAKALDKHTAKLCCLAKDCDNPEYTKLVRALCEEGGVNLVMVDTGKQLGEWCGLCKIDEEGEATKVVRCSCAVITEFGEESQALNVLLEFLK 141          
BLAST of mRNA_H-paniculata_contig1057.372.1 vs. uniprot
Match: A0A7S2CD91_9STRA (40S ribosomal protein S12 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CD91_9STRA)

HSP 1 Score: 186 bits (471), Expect = 5.910e-58
Identity = 87/123 (70.73%), Postives = 105/123 (85.37%), Query Frame = 0
Query:   23 EVKEISVLDALKQVLKKALIFDGLRRGLHECAKVLDRGSARLCCLAKDCDNPEYTQLVRALCDEGSVHLIMVDSRQELGQWAGLCKIGLEGEATKIVPCSCAVVTDYGEQTQALGVLLEHLKK 145
            EV+E+ VLDALK+VLKKAL+ DGLRRGLHE  K LDR SA+LCCLAKDCDNPEY +LVRALC+EG V+L+MV++ + LG+W GLCKI   GEA K+V CSCAVVT++GE+TQAL +LLE LKK
Sbjct:   18 EVEEMGVLDALKEVLKKALVHDGLRRGLHEGVKALDRHSAKLCCLAKDCDNPEYNKLVRALCEEGGVNLVMVETGKTLGEWCGLCKIDENGEAVKVVRCSCAVVTEFGEETQALNILLEFLKK 140          
BLAST of mRNA_H-paniculata_contig1057.372.1 vs. uniprot
Match: K0T7T2_THAOC (40S ribosomal protein S12 n=2 Tax=Thalassiosira TaxID=35127 RepID=K0T7T2_THAOC)

HSP 1 Score: 177 bits (448), Expect = 1.810e-54
Identity = 87/136 (63.97%), Postives = 106/136 (77.94%), Query Frame = 0
Query:   10 DGAGENVTGAEVTEVKEISVLDALKQVLKKALIFDGLRRGLHECAKVLDRGSARLCCLAKDCDNPEYTQLVRALCDEGSVHLIMVDSRQELGQWAGLCKIGLEGEATKIVPCSCAVVTDYGEQTQALGVLLEHLKK 145
            D  G  V    V EV E++VLDALK+VLKKALI DGLR+GLHECAK LDR SARLCCLAKDC+N EY +L+RALC EG V +IMVDS ++LG W GL K+  +GE  K V  SCAV+TD+GE+T+AL VLL++L+K
Sbjct:    3 DEEGAPVAEEVVEEVAEMNVLDALKEVLKKALIHDGLRKGLHECAKALDRRSARLCCLAKDCENEEYKKLIRALCAEGEVSVIMVDSGKDLGAWCGLAKLDADGEVKKAVRTSCAVITDFGEETRALTVLLDYLQK 138          
BLAST of mRNA_H-paniculata_contig1057.372.1 vs. uniprot
Match: A0A812WN01_SYMMI (40S ribosomal protein S12 n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WN01_SYMMI)

HSP 1 Score: 173 bits (439), Expect = 3.720e-53
Identity = 81/137 (59.12%), Postives = 106/137 (77.37%), Query Frame = 0
Query:   12 AGENVTGAEVTEVKEISVLDALKQVLKKALIFDGLRRGLHECAKVLDRGSARLCCLAKDCDNPEYTQLVRALCDEGSVHLIMVDSRQELGQWAGLCKIGLEGEATKIVPCSCAVVTDYGEQTQALGVLLEHLKKGGE 148
            A EN    EV E  E+ VLDALK+V KKA ++DGLRRG+HECAK LDR +ARLCCLAKDCD+ EY +L++ALCDE  VHLIMVDS +E+G+W GL K+  +G + K+V  SCAV+T+YGE+T AL V+L++++   E
Sbjct:    2 AEENEEVMEVVEEGEMGVLDALKEVFKKAALYDGLRRGIHECAKALDRRAARLCCLAKDCDHEEYVRLIQALCDESGVHLIMVDSGKEIGEWCGLAKLNEDGTSRKVVRTSCAVITEYGEETPALNVVLKYVQSQQE 138          
BLAST of mRNA_H-paniculata_contig1057.372.1 vs. uniprot
Match: A0A7S2LXQ0_9STRA (40S ribosomal protein S12 n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LXQ0_9STRA)

HSP 1 Score: 174 bits (441), Expect = 7.420e-53
Identity = 82/123 (66.67%), Postives = 102/123 (82.93%), Query Frame = 0
Query:   23 EVKEISVLDALKQVLKKALIFDGLRRGLHECAKVLDRGSARLCCLAKDCDNPEYTQLVRALCDEGSVHLIMVDSRQELGQWAGLCKIGLEGEATKIVPCSCAVVTDYGEQTQALGVLLEHLKK 145
            EV E++VLDALK+VLKKAL+ DGLR+GLHECAK LDR SARLCCLAKDC+N EY +L+RALC EG V +IMVDS ++LG W GL K+  +GE  K V  SCAV+TD+GE+T+AL VLL++L+K
Sbjct:   54 EVAEMNVLDALKEVLKKALVHDGLRKGLHECAKALDRRSARLCCLAKDCENEEYKKLIRALCAEGEVSVIMVDSGKDLGAWCGLAKLDADGEVKKAVRTSCAVITDFGEETRALSVLLDYLQK 176          
BLAST of mRNA_H-paniculata_contig1057.372.1 vs. uniprot
Match: G4ZQP8_PHYSP (40S ribosomal protein S12 n=15 Tax=Eukaryota TaxID=2759 RepID=G4ZQP8_PHYSP)

HSP 1 Score: 172 bits (436), Expect = 1.070e-52
Identity = 83/130 (63.85%), Postives = 103/130 (79.23%), Query Frame = 0
Query:   19 AEVTEVKEISVLDALKQVLKKALIFDGLRRGLHECAKVLDRGSARLCCLAKDCDNPEYTQLVRALCDEGSVHLIMVDSRQELGQWAGLCKIGLEGEATKIVPCSCAVVTDYGEQTQALGVLLEHLKKGGE 148
            AEV   KE+  +DALK+VLKKALI DGL+RGLHE AK LD   ARLCCLA+DCD P Y++LVRALC+E  V+LI+V S ++LG+W GLCKI   GEA K+V  SCAV+TD+GE+T AL VLL++LK+ GE
Sbjct:    8 AEVEVPKELGEMDALKEVLKKALIHDGLKRGLHEAAKALDSRRARLCCLAQDCDEPSYSKLVRALCEEHGVNLILVPSGKQLGEWCGLCKIDSLGEARKVVSTSCAVITDFGEETHALNVLLDYLKRQGE 137          
BLAST of mRNA_H-paniculata_contig1057.372.1 vs. uniprot
Match: A0A7S1CEP1_9STRA (40S ribosomal protein S12 n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CEP1_9STRA)

HSP 1 Score: 172 bits (437), Expect = 1.210e-52
Identity = 80/134 (59.70%), Postives = 101/134 (75.37%), Query Frame = 0
Query:   14 ENVTGAEVTEVKEISVLDALKQVLKKALIFDGLRRGLHECAKVLDRGSARLCCLAKDCDNPEYTQLVRALCDEGSVHLIMVDSRQELGQWAGLCKIGLEGEATKIVPCSCAVVTDYGEQTQALGVLLEHLKKGG 147
            E  T AE  +   +    AL++VLKKAL+ DGL+RGLHE AK LDRGSARLCCLA+DCD P YT+LVRALC  G + L+MV   +ELG+WAGLCKI  EG ATK+V CSC  VTDYG++++AL +LL+ +K+ G
Sbjct:   14 EEETKAEPEKTGPMDTRTALREVLKKALMHDGLKRGLHEAAKALDRGSARLCCLAEDCDEPNYTRLVRALCSNGGIPLVMVPKGEELGEWAGLCKIDKEGNATKVVKCSCVAVTDYGQESEALSILLDLIKQSG 147          
BLAST of mRNA_H-paniculata_contig1057.372.1 vs. uniprot
Match: A0A7S1BMI5_9STRA (40S ribosomal protein S12 n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BMI5_9STRA)

HSP 1 Score: 172 bits (435), Expect = 1.510e-52
Identity = 83/126 (65.87%), Postives = 101/126 (80.16%), Query Frame = 0
Query:   23 EVKEISVLDALKQVLKKALIFDGLRRGLHECAKVLDRGSARLCCLAKDCDNPEYTQLVRALCDEGSVHLIMVDSRQELGQWAGLCKIGLEGEATKIVPCSCAVVTDYGEQTQALGVLLEHLKKGGE 148
            E  E+SVLDALK+VLKKALI DGL++GLHECAK LD+ SARLCCLAKDC+N EY +L+RAL  EG V+LIMVDS +ELG W GL K+G + E  K V  SCAV+TD+GE+T AL +LL++LKK  E
Sbjct:   12 ETTEMSVLDALKEVLKKALIHDGLKKGLHECAKALDKRSARLCCLAKDCENEEYKKLIRALAAEGDVNLIMVDSGKELGTWCGLAKLGADLEVKKSVRTSCAVITDFGEETHALNILLDYLKKQAE 137          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1057.372.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHF7_ECTSI1.210e-8492.4240S ribosomal protein S12 n=2 Tax=Ectocarpus TaxID... [more]
A0A835YYB7_9STRA2.060e-7070.9540S ribosomal protein S12 n=1 Tax=Tribonema minus ... [more]
A0A7S2CVX4_9STRA5.890e-6167.1540S ribosomal protein S12 n=1 Tax=Florenciella par... [more]
A0A7S2CD91_9STRA5.910e-5870.7340S ribosomal protein S12 n=1 Tax=Dictyocha specul... [more]
K0T7T2_THAOC1.810e-5463.9740S ribosomal protein S12 n=2 Tax=Thalassiosira Ta... [more]
A0A812WN01_SYMMI3.720e-5359.1240S ribosomal protein S12 n=1 Tax=Symbiodinium mic... [more]
A0A7S2LXQ0_9STRA7.420e-5366.6740S ribosomal protein S12 n=1 Tax=Skeletonema mari... [more]
G4ZQP8_PHYSP1.070e-5263.8540S ribosomal protein S12 n=15 Tax=Eukaryota TaxID... [more]
A0A7S1CEP1_9STRA1.210e-5259.7040S ribosomal protein S12 n=1 Tax=Bicosoecida sp. ... [more]
A0A7S1BMI5_9STRA1.510e-5265.8740S ribosomal protein S12 n=1 Tax=Corethron hystri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000530Ribosomal protein S12ePRINTSPR00972RIBSOMALS12Ecoord: 116..129
score: 57.79
coord: 36..49
score: 68.18
coord: 50..66
score: 47.06
coord: 91..112
score: 51.65
IPR000530Ribosomal protein S12ePANTHERPTHR1184340S RIBOSOMAL PROTEIN S12coord: 25..145
IPR000530Ribosomal protein S12ePROSITEPS01189RIBOSOMAL_S12Ecoord: 32..50
IPR004038Ribosomal protein L7Ae/L30e/S12e/Gadd45PFAMPF01248Ribosomal_L7Aecoord: 31..125
e-value: 6.0E-23
score: 80.4
IPR02906450S ribosomal protein L30e-likeGENE3D3.30.1330.30coord: 14..146
e-value: 3.8E-50
score: 170.6
IPR02906450S ribosomal protein L30e-likeSUPERFAMILY55315L30e-likecoord: 29..144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1057contigH-paniculata_contig1057:20257..21945 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1057.372.1mRNA_H-paniculata_contig1057.372.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1057 20257..22437 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1057.372.1 ID=prot_H-paniculata_contig1057.372.1|Name=mRNA_H-paniculata_contig1057.372.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=149bp
MVAEDVMAGDGAGENVTGAEVTEVKEISVLDALKQVLKKALIFDGLRRGL
HECAKVLDRGSARLCCLAKDCDNPEYTQLVRALCDEGSVHLIMVDSRQEL
GQWAGLCKIGLEGEATKIVPCSCAVVTDYGEQTQALGVLLEHLKKGGE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000530Ribosomal_S12e
IPR004038Ribosomal_L7Ae/L30e/S12e/Gad45
IPR029064L30e-like