mRNA_H-paniculata_contig1653.3718.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1653.3718.1
Unique NamemRNA_H-paniculata_contig1653.3718.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig1653.3718.1 vs. uniprot
Match: D7G8S8_ECTSI (Acetyl-CoA acetyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8S8_ECTSI)

HSP 1 Score: 431 bits (1108), Expect = 7.390e-149
Identity = 213/254 (83.86%), Postives = 236/254 (92.91%), Query Frame = 1 
Query:    1 GIVHDGLWDVYNDHHMGICAELCSQTYSIGREAQDKHATESYERAALAWQQGKFDDETVAVEVPATKRGRPPSTITKDEEYTNIDLAKLADLRPAFQKEGGTVTAANASSLNDGAAALVLMSLQRAEELGVQPLARIMGYGDAARAPVEFTVAPSDAVPVALKNAGITLGDVDFHEINEAFSVVALANMQLMGLDPAKVNVNGGAVALGHPIGSSGARIICSLYHVLKQNDGVIGCASICNGGGGASAIVIERL 762
            GI+HDGLWDVYNDHHMGICAE CS  Y I REAQD+HATESY+RAALAW++G+FD+ET  VE+ +++RG P +TITKDEEYTNIDL KL  LRPAF++E GTVTAANASSLNDGAAALVLMS  RAEELGV+PLARI+GYGDAARAPVEFT+APSDAVPVALKNA I+LGDVDFHEINEAFSVVALANM++MGLDPA+VNVNGGAVALGHPIGSSGARIICSLYHVLKQNDG +GCASICNGGGGASAI+IERL
Sbjct:  173 GIIHDGLWDVYNDHHMGICAEKCSSAYGISREAQDEHATESYQRAALAWEKGRFDEETTPVEI-SSRRGSP-TTITKDEEYTNIDLGKLKGLRPAFEREEGTVTAANASSLNDGAAALVLMSTARAEELGVKPLARILGYGDAARAPVEFTIAPSDAVPVALKNAAISLGDVDFHEINEAFSVVALANMKIMGLDPARVNVNGGAVALGHPIGSSGARIICSLYHVLKQNDGTVGCASICNGGGGASAIIIERL 424
[Close]
BLAST of mRNA_H-paniculata_contig1653.3718.1 vs. uniprot
Match: A0A836CMJ8_9STRA (Acetyl-CoA acetyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMJ8_9STRA)

HSP 1 Score: 335 bits (860), Expect = 4.040e-111
Identity = 176/254 (69.29%), Postives = 204/254 (80.31%), Query Frame = 1 
Query:    1 GIVHDGLWDVYNDHHMGICAELCSQTYSIGREAQDKHATESYERAALAWQQGKFDDETVAVEVPATKRGRPPSTITKDEEYTNIDLAKLADLRPAFQKEGGTVTAANASSLNDGAAALVLMSLQRAEELGVQPLARIMGYGDAARAPVEFTVAPSDAVPVALKNAGITLGDVDFHEINEAFSVVALANMQLMGLDPAKVNVNGGAVALGHPIGSSGARIICSLYHVLKQNDGVIGCASICNGGGGASAIVIERL 762
            G++ D L DVYN+ HMG+CAE+C+ T+   R+ QD +A ESY RAA AW  GKF DE  A+EVP + RG+PP TI++D E + ID  K+   RPAF K  G+VTAANAS+LNDGAAALVL S +RA ELG+ PLAR++GY DAAR PVEFTVAPSDAVP AL  AGI  GDVDFHE+NEAF+VVALANM+L  LD AKVNVNGGAVALGHP+G+SGARII +LY VLKQ DG IGCASICNGGGGASAIVIERL
Sbjct:  183 GLLTDALTDVYNEQHMGMCAEVCADTHGFSRDEQDDYALESYRRAAAAWDSGKFKDEVFALEVPQS-RGKPPVTISRDHE-SPIDPKKVRAARPAF-KSSGSVTAANASTLNDGAAALVLSSAKRARELGLSPLARVLGYADAARDPVEFTVAPSDAVPRALSVAGIAAGDVDFHEVNEAFAVVALANMRLQRLDHAKVNVNGGAVALGHPLGASGARIIGTLYTVLKQEDGTIGCASICNGGGGASAIVIERL 433
[Close]
BLAST of mRNA_H-paniculata_contig1653.3718.1 vs. uniprot
Match: A0A7S4VFA4_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VFA4_9STRA)

HSP 1 Score: 330 bits (845), Expect = 2.490e-109
Identity = 167/255 (65.49%), Postives = 206/255 (80.78%), Query Frame = 1 
Query:    1 GIVHDGLWDVYNDHHMGICAELCSQTYSIGREAQDKHATESYERAALAWQQGKFDDETVAVEVPATKRGRPPSTITKDEEYTNIDLAKLADLRPAFQKEGGTVTAANASSLNDGAAALVLMSLQRAEELGVQPLARIMGYGDAARAPVEFTVAPSDAVPVALKNAGITLGDVDFHEINEAFSVVALANMQLMGLDPAKVNVNGGAVALGHPIGSSGARIICSLYHVLKQNDGVIGCASICNGGGGASAIVIERLS 765
            G++HDGLWDVYND HMG+CAE C+  YSI RE QD +A ESY R+  A + G F+ E  +V+VP  +R   P+ I+ DEE  ++ L K++ LRPAFQ+E GTVTAANASSLNDGAAA+VLMS Q A +  ++PLARI GYGDA + PV+FT APS AVPVAL+NAG+ L D+++HEINEAFSVVA++NM+L+ LDP+KVNV GGAVA+GHPIG SGARII +LY+VLKQ D  +GCASICNGGGGASAIVIERL+
Sbjct:  147 GVIHDGLWDVYNDQHMGMCAEKCASDYSISREEQDNYAIESYRRSQEAIEAGAFESEIESVQVP--QRRGDPTIISTDEEPFSVKLDKVSTLRPAFQRENGTVTAANASSLNDGAAAMVLMSEQDALDRNLKPLARIRGYGDAEQDPVDFTTAPSLAVPVALRNAGMDLSDIEYHEINEAFSVVAISNMKLLNLDPSKVNVFGGAVAIGHPIGMSGARIIGTLYNVLKQCDATVGCASICNGGGGASAIVIERLN 399
[Close]
BLAST of mRNA_H-paniculata_contig1653.3718.1 vs. uniprot
Match: A0A7S1CPK7_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CPK7_9STRA)

HSP 1 Score: 329 bits (843), Expect = 3.410e-109
Identity = 168/254 (66.14%), Postives = 202/254 (79.53%), Query Frame = 1 
Query:    1 GIVHDGLWDVYNDHHMGICAELCSQTYSIGREAQDKHATESYERAALAWQQGKFDDETVAVEVPATKRGRPPSTITKDEEYTNIDLAKLADLRPAFQKEGGTVTAANASSLNDGAAALVLMSLQRAEELGVQPLARIMGYGDAARAPVEFTVAPSDAVPVALKNAGITLGDVDFHEINEAFSVVALANMQLMGLDPAKVNVNGGAVALGHPIGSSGARIICSLYHVLKQNDGVIGCASICNGGGGASAIVIERL 762
            GIVHDGLWDVYND HMG+CAE C+  Y I REAQD +A +SY+RAA AW+ G F DE  AV VP  +R      + +DEE+  I+  K+  L PAF+K GG+VTAANASSLNDGAAA+VLMS  RA ELG  PLARI+G+GDAA+AP +FT AP+ A+P+AL +AG+  GDVD+HEINEAF+VVALANMQLMGLD ++VNVNGGAVALGHPIG SGARI+ +L  VLKQ D  +G ASICNGGGGAS+I++ERL
Sbjct:  137 GIVHDGLWDVYNDQHMGMCAEKCAADYGISREAQDAYAIDSYKRAAAAWEAGLFADEVCAVSVP--QRRGDALVVDRDEEFARINYDKVGKLAPAFKK-GGSVTAANASSLNDGAAAMVLMSAARAAELGATPLARIVGFGDAAQAPEDFTTAPALALPLALADAGMAAGDVDYHEINEAFAVVALANMQLMGLDASRVNVNGGAVALGHPIGCSGARIVGTLLSVLKQKDARVGAASICNGGGGASSIIVERL 387
[Close]
BLAST of mRNA_H-paniculata_contig1653.3718.1 vs. uniprot
Match: A0A7S2HN88_9STRA (Hypothetical protein n=2 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HN88_9STRA)

HSP 1 Score: 328 bits (840), Expect = 1.380e-108
Identity = 166/255 (65.10%), Postives = 205/255 (80.39%), Query Frame = 1 
Query:    1 GIVHDGLWDVYNDHHMGICAELCSQTYSIGREAQDKHATESYERAALAWQQGKFDDETVAVEVPATKRGRPPSTITKDEEYTNIDLAKLADLRPAFQKEGGTVTAANASSLNDGAAALVLMSLQRAEELGVQPLARIMGYGDAARAPVEFTVAPSDAVPVALKNAGITLGDVDFHEINEAFSVVALANMQLMGLDPAKVNVNGGAVALGHPIGSSGARIICSLYHVLKQNDGVIGCASICNGGGGASAIVIERLS 765
            G++HDGLWDVYND HMG+CAE C+  Y+I RE QD +A ESY RA  A ++  F+DE   VEVP  +R      ++ DEE  ++ L K++ L+PAFQ+E GTVTAANASSLNDGAAA+VLMS Q A ++G++PLARI G+GDA + PV+FT  PS AVPVALKNAG+ L DVD+HE+NEAFSVVA+ANM+L+ LDP+KVNV GGAV++GHPIG SGARII +LY+VLKQ D  IGCASICNGGGGASAIVIER++
Sbjct:  146 GVIHDGLWDVYNDQHMGMCAEKCASDYAISREDQDAYAIESYRRAQEAIEKKVFEDEIEGVEVP--QRRGDSKIVSTDEEPFSVKLEKVSALKPAFQRENGTVTAANASSLNDGAAAMVLMSEQAALDMGLKPLARIRGFGDAEQDPVDFTTTPSLAVPVALKNAGMKLSDVDYHEVNEAFSVVAIANMKLLNLDPSKVNVFGGAVSIGHPIGMSGARIIGTLYNVLKQCDATIGCASICNGGGGASAIVIERMN 398
[Close]
BLAST of mRNA_H-paniculata_contig1653.3718.1 vs. uniprot
Match: A0A661XTI1_9BACT (Acetyl-CoA C-acetyltransferase (Fragment) n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A661XTI1_9BACT)

HSP 1 Score: 319 bits (817), Expect = 3.330e-106
Identity = 161/254 (63.39%), Postives = 203/254 (79.92%), Query Frame = 1 
Query:    1 GIVHDGLWDVYNDHHMGICAELCSQTYSIGREAQDKHATESYERAALAWQQGKFDDETVAVEVPATKRGRPPSTITKDEEYTNIDLAKLADLRPAFQKEGGTVTAANASSLNDGAAALVLMSLQRAEELGVQPLARIMGYGDAARAPVEFTVAPSDAVPVALKNAGITLGDVDFHEINEAFSVVALANMQLMGLDPAKVNVNGGAVALGHPIGSSGARIICSLYHVLKQNDGVIGCASICNGGGGASAIVIERL 762
            G+V DGLWDVYN++HMG  AELC+   +I RE QD+ A ESY R++ AW+ GKF+DE V VEVP  +RG P   +  DEE++N+ L K+  LR AFQKEG TVTAANAS++NDGAAAL+LMS ++ E LG++PLA+I+GYGDAA AP  FT APS A+P+ALK A + + D+D+ EINEAFSVV+LAN++L+GLDP KV+VNGGAVALGHP+G+SGARII +L HVLKQN G  G + ICNGGGGASA+VIE +
Sbjct:   70 GMVKDGLWDVYNNYHMGNAAELCATDCNISREQQDEFAIESYRRSSAAWEAGKFNDEVVPVEVPQ-RRGEP-KVVNIDEEFSNVILEKIPKLRGAFQKEG-TVTAANASTINDGAAALILMSKEKMESLGLKPLAKILGYGDAALAPEYFTKAPSQAIPIALKRANLEINDIDYWEINEAFSVVSLANLELLGLDPVKVDVNGGAVALGHPLGTSGARIIVTLIHVLKQNKGKYGASGICNGGGGASAMVIENI 320
[Close]
BLAST of mRNA_H-paniculata_contig1653.3718.1 vs. uniprot
Match: A0A485LQ82_9STRA (Aste57867_24360 protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485LQ82_9STRA)

HSP 1 Score: 316 bits (810), Expect = 6.790e-104
Identity = 157/254 (61.81%), Postives = 201/254 (79.13%), Query Frame = 1 
Query:    1 GIVHDGLWDVYNDHHMGICAELCSQTYSIGREAQDKHATESYERAALAWQQGKFDDETVAVEVPATKRGRPPSTITKDEEYTNIDLAKLADLRPAFQKEGGTVTAANASSLNDGAAALVLMSLQRAEELGVQPLARIMGYGDAARAPVEFTVAPSDAVPVALKNAGITLGDVDFHEINEAFSVVALANMQLMGLDPAKVNVNGGAVALGHPIGSSGARIICSLYHVLKQNDGVIGCASICNGGGGASAIVIERL 762
            G++HDGLWD YN+ HMG C E C+  +   RE QDK+A ESY RAA A + G+F  E V V +P+ K    P+ +++D+E  N+ L K+  LRPAF+K+G TVTAANAS LNDGAAALV+M+ ++A+ LG++PLARI G+GDAA  PV+FT AP+ AVP+A K+A ++L D+D+HEINEAFSVV+LANMQLM LD ++VNVNGGAVALGHPIG SGARI+ +L H+L+QND  IGCASICNGGGGA A++IERL
Sbjct:  159 GVIHDGLWDPYNNQHMGNCGEKCADEFGFTREDQDKYAIESYTRAANAAKAGRFAAEIVPVSIPSRKGD--PTIVSQDDEVYNVKLDKIPSLRPAFKKDG-TVTAANASPLNDGAAALVVMAYEKAQALGLKPLARIRGFGDAAHKPVDFTTAPAKAVPIAAKHAKLSLTDIDYHEINEAFSVVSLANMQLMNLDHSRVNVNGGAVALGHPIGMSGARIVGTLIHILEQNDATIGCASICNGGGGAGAMIIERL 409
[Close]
BLAST of mRNA_H-paniculata_contig1653.3718.1 vs. uniprot
Match: B7GDK2_PHATC (Acetyl-coa c-acetyltransferase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GDK2_PHATC)

HSP 1 Score: 315 bits (807), Expect = 1.280e-103
Identity = 166/255 (65.10%), Postives = 194/255 (76.08%), Query Frame = 1 
Query:    1 GIVHDGLWDVYNDHHMGICAELCSQTYSIGREAQDKHATESYERAALAWQQGKFDDETVAVEVPATKRGRPPSTITKDEEYTNIDLAKLADLRPAFQKEGGTVTAANASSLNDGAAALVLMSLQRAEELGVQPLARIMGYGDAARAPVEFTVAPSDAVPVALKNAGITLGDVDFHEINEAFSVVALANMQLMGLDPAKVNVNGGAVALGHPIGSSGARIICSLYHVLKQNDGVIGCASICNGGGGASAIVIERLS 765
            G +HDGLWDVYND HMG+C E CSQ YS  RE QD +A ESY RA  A   G FD E V V VP  +R   P  + +DEE   ++L K++ L+PAF ++ GTVTAANASSLNDGAAALVLM+   AE  G+QPLARI GYGDA + P++FT  PS AVPVAL++AGI   DV++HEINEAF+VVALANM ++GLD AK+NV GGAVALGHPIG SGARII +LY  LK  D  IGCASICNGGGGASAIVIERL+
Sbjct:  145 GCIHDGLWDVYNDQHMGMCGEKCSQDYSFSREDQDAYAMESYRRAQEALISGVFD-EVVPVSVP--QRRGDPLVVDQDEEPLAVNLDKISTLKPAFDRKNGTVTAANASSLNDGAAALVLMTEVDAEAQGIQPLARIRGYGDAEQDPIDFTTTPSLAVPVALEHAGIQASDVEYHEINEAFAVVALANMHILGLDHAKLNVFGGAVALGHPIGMSGARIIGTLYSALKSKDATIGCASICNGGGGASAIVIERLA 396
[Close]
BLAST of mRNA_H-paniculata_contig1653.3718.1 vs. uniprot
Match: A0A7Z9GG93_9FLAO (Acetyl-CoA C-acyltransferase n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A7Z9GG93_9FLAO)

HSP 1 Score: 315 bits (806), Expect = 1.600e-103
Identity = 164/254 (64.57%), Postives = 198/254 (77.95%), Query Frame = 1 
Query:    1 GIVHDGLWDVYNDHHMGICAELCSQTYSIGREAQDKHATESYERAALAWQQGKFDDETVAVEVPATKRGRPPSTITKDEEYTNIDLAKLADLRPAFQKEGGTVTAANASSLNDGAAALVLMSLQRAEELGVQPLARIMGYGDAARAPVEFTVAPSDAVPVALKNAGITLGDVDFHEINEAFSVVALANMQLMGLDPAKVNVNGGAVALGHPIGSSGARIICSLYHVLKQNDGVIGCASICNGGGGASAIVIERL 762
            G+VHDGL DVYN++HMG  AELC++  +I RE QD  A ESYER+A AW +GKF+DE V VEVP  +R   P T+++DEEY N DL K+  L+P FQKEG TVTAANAS+LNDGAAALVLMS ++AE LG   LA I GY D A+AP  FT APSDA+P A++ AGI + DVD+ E+NEAFSVV +AN + M LDPAKVNVNGGAVALGHP+G SGARII +L +VL+QN   +G A ICNGGGGASA+VIER+
Sbjct:  142 GLVHDGLTDVYNEYHMGNAAELCAKECNISREEQDAFAIESYERSARAWSEGKFNDEIVPVEVP--QRRGDPVTVSEDEEYKNSDLKKIPQLKPVFQKEG-TVTAANASTLNDGAAALVLMSREKAEALGCTVLATIRGYADTAKAPEWFTTAPSDALPKAVERAGIAMNDVDYFELNEAFSVVGIANTREMNLDPAKVNVNGGAVALGHPLGCSGARIIVTLINVLEQNGAKLGAAGICNGGGGASAMVIERV 392
[Close]
BLAST of mRNA_H-paniculata_contig1653.3718.1 vs. uniprot
Match: A0A448ZBV3_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZBV3_9STRA)

HSP 1 Score: 312 bits (800), Expect = 2.520e-103
Identity = 160/254 (62.99%), Postives = 199/254 (78.35%), Query Frame = 1 
Query:    1 GIVHDGLWDVYNDHHMGICAELCSQTYSIGREAQDKHATESYERAALAWQQGKFDDETVAVEVPATKRGRPPSTITKDEEYTNIDLAKLADLRPAFQKEGGTVTAANASSLNDGAAALVLMSLQRAEELGVQPLARIMGYGDAARAPVEFTVAPSDAVPVALKNAGITLGDVDFHEINEAFSVVALANMQLMGLDPAKVNVNGGAVALGHPIGSSGARIICSLYHVLKQNDGVIGCASICNGGGGASAIVIERL 762
            G+V+DGLWD+YND HMG+C E C++ Y+  RE QD++A ESY RA  A  +G F+ E + VE+P  +RG     + +DEE  ++ L ++A L+PAF +  GT+TAANASSLNDGA A+VLM+ Q A + G+ P+A+I G+GDAA+APVEFT  PS AVP AL+NAG+   DVD+HEINEAFSVVALANMQL+ LD +KVNV GGAV+LGHPIG SGARII +LY+VLK  DG IGCASICNGGGGASAIVIERL
Sbjct:   90 GVVYDGLWDIYNDQHMGMCGEKCAKDYAFSREDQDEYAIESYRRAQAALVEGVFE-EVIPVEIPQ-RRGNQ-LVVNEDEEPGSMKLDRIASLKPAFDRTNGTITAANASSLNDGACAMVLMTEQDALDKGINPIAKIRGFGDAAQAPVEFTTTPSLAVPXALQNAGVEASDVDYHEINEAFSVVALANMQLLNLDQSKVNVFGGAVSLGHPIGMSGARIIGTLYNVLKHKDGNIGCASICNGGGGASAIVIERL 340
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1653.3718.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8S8_ECTSI7.390e-14983.86Acetyl-CoA acetyltransferase n=1 Tax=Ectocarpus si... [more]
A0A836CMJ8_9STRA4.040e-11169.29Acetyl-CoA acetyltransferase n=1 Tax=Tribonema min... [more]
A0A7S4VFA4_9STRA2.490e-10965.49Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S1CPK7_9STRA3.410e-10966.14Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A7S2HN88_9STRA1.380e-10865.10Hypothetical protein n=2 Tax=Helicotheca tamesis T... [more]
A0A661XTI1_9BACT3.330e-10663.39Acetyl-CoA C-acetyltransferase (Fragment) n=1 Tax=... [more]
A0A485LQ82_9STRA6.790e-10461.81Aste57867_24360 protein n=2 Tax=Aphanomyces TaxID=... [more]
B7GDK2_PHATC1.280e-10365.10Acetyl-coa c-acetyltransferase n=2 Tax=Phaeodactyl... [more]
A0A7Z9GG93_9FLAO1.600e-10364.57Acetyl-CoA C-acyltransferase n=1 Tax=Flavobacteria... [more]
A0A448ZBV3_9STRA2.520e-10362.99Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1653contigH-paniculata_contig1653:254..9179 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score430.6
Seed ortholog evalue5e-118
Seed eggNOG ortholog2880.D7G8S8
KEGG rclassRC00004,RC00326
KEGG koko:K00626,ko:K03066
KEGG ReactionR00238,R01177
KEGG Pathwayko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,ko03050,ko05169,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020,map03050,map05169
KEGG ModuleM00088,M00095,M00341,M00373,M00374,M00375
Hectar predicted targeting categoryother localisation
EggNOG free text desc.acetyl-CoA C-acetyltransferase activity
EggNOG OGsCOG0183@1,KOG1390@2759
EC2.3.1.9
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03051,ko04147
Exons7
Model size768
Cds size768
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929315.912662-CDS-H-paniculata_contig1653:253..4061622929315.912662-CDS-H-paniculata_contig1653:253..406Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1653 254..406 +
1691480812.3851767-CDS-H-paniculata_contig1653:253..4061691480812.3851767-CDS-H-paniculata_contig1653:253..406Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1653 254..406 +
1622929315.9247463-CDS-H-paniculata_contig1653:1037..11331622929315.9247463-CDS-H-paniculata_contig1653:1037..1133Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1653 1038..1133 +
1691480812.3976278-CDS-H-paniculata_contig1653:1037..11331691480812.3976278-CDS-H-paniculata_contig1653:1037..1133Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1653 1038..1133 +
1622929315.9360101-CDS-H-paniculata_contig1653:3817..39421622929315.9360101-CDS-H-paniculata_contig1653:3817..3942Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1653 3818..3942 +
1691480812.407312-CDS-H-paniculata_contig1653:3817..39421691480812.407312-CDS-H-paniculata_contig1653:3817..3942Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1653 3818..3942 +
1622929315.9477663-CDS-H-paniculata_contig1653:4452..45131622929315.9477663-CDS-H-paniculata_contig1653:4452..4513Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1653 4453..4513 +
1691480812.4152212-CDS-H-paniculata_contig1653:4452..45131691480812.4152212-CDS-H-paniculata_contig1653:4452..4513Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1653 4453..4513 +
1622929315.9630668-CDS-H-paniculata_contig1653:6385..65201622929315.9630668-CDS-H-paniculata_contig1653:6385..6520Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1653 6386..6520 +
1691480812.4237816-CDS-H-paniculata_contig1653:6385..65201691480812.4237816-CDS-H-paniculata_contig1653:6385..6520Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1653 6386..6520 +
1622929315.9762695-CDS-H-paniculata_contig1653:8041..81091622929315.9762695-CDS-H-paniculata_contig1653:8041..8109Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1653 8042..8109 +
1691480812.4336658-CDS-H-paniculata_contig1653:8041..81091691480812.4336658-CDS-H-paniculata_contig1653:8041..8109Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1653 8042..8109 +
1622929315.99149-CDS-H-paniculata_contig1653:9049..91791622929315.99149-CDS-H-paniculata_contig1653:9049..9179Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1653 9050..9179 +
1691480812.4438882-CDS-H-paniculata_contig1653:9049..91791691480812.4438882-CDS-H-paniculata_contig1653:9049..9179Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1653 9050..9179 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1653.3718.1prot_H-paniculata_contig1653.3718.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1653 254..9179 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1653.3718.1

>prot_H-paniculata_contig1653.3718.1 ID=prot_H-paniculata_contig1653.3718.1|Name=mRNA_H-paniculata_contig1653.3718.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=256bp
GIVHDGLWDVYNDHHMGICAELCSQTYSIGREAQDKHATESYERAALAWQ
QGKFDDETVAVEVPATKRGRPPSTITKDEEYTNIDLAKLADLRPAFQKEG
GTVTAANASSLNDGAAALVLMSLQRAEELGVQPLARIMGYGDAARAPVEF
TVAPSDAVPVALKNAGITLGDVDFHEINEAFSVVALANMQLMGLDPAKVN
VNGGAVALGHPIGSSGARIICSLYHVLKQNDGVIGCASICNGGGGASAIV
IERLS*
back to top

mRNA from alignment at H-paniculata_contig1653:254..9179+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1653.3718.1 ID=mRNA_H-paniculata_contig1653.3718.1|Name=mRNA_H-paniculata_contig1653.3718.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8926bp|location=Sequence derived from alignment at H-paniculata_contig1653:254..9179+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGCATCGTTCATGACGGACTGTGGGACGTGTACAACGATCACCATATGGG
TATTTGCGCCGAGCTGTGCTCCCAGACGTACTCCATCGGTCGTGAGGCAC
AAGACAAGCATGCCACGGAGAGCTACGAGCGGGCTGCTCTAGCTTGGCAG
CAGGTAGGACACGTACGGGATCCTTTTGCCCGAGGCTATACTTCTTTTTC
GGTTGCTGCGGGACCGGTCGCTATTTTCATGAAAACTAGCGGGCCTGTTT
GGAAGAAAACAGTTGGATAGAGAACGGAAACATTTTTAGGAGATGGTCGT
CGTCCTCATCACCATCACCGTCATCGTCACCATTGCTGCATTGATTCAAA
AGCACAAGCGAAGGGGGTATATTTTTTGTCACGCCGATTTTACTAGTCTA
GTGCTTTTTTTTGTTTGCTCTGTTGCTTGAAATGTATGAGCTGCGTGGTA
CTTGAACGTTTTCTTCCAGAAAAACGATGCGATGCCTTTTGGTTTTACGT
CTTTACAACACCTATAGTTACCGTAGGACAGAAAGTATCTTTTAGTAGTA
TTTTACTGATTCAAGGGCATCCAACACCAAGAGAAACACGCGGGGAGACA
TGAATAAATATAAACAAAAAGTGTGTGTGGCTCTACGTCCTTCTTATTAT
GGCTGCACGCATTCGGCCGCAATGCCTACTGGTAACGGCATGCGACCCAG
AAGCATATCTTTGGATCGACTGTCGTTTTTTTTTTTTTTTCATGTCTGCC
GGTCTCTCTTATTGTATTTTTTCCCCTCCTTCAGGGTAAGTTCGACGACG
AGACTGTTGCAGTTGAAGTCCCGGCGACAAAGCGAGGTCGTCCACCGTCG
ACCATCACCAAAGACGAGGAGTACACAAATGTCAGTGAGTGTGAGCGTGT
TTTTGTGGGTTTTTTTGTGTGTGCTTAATGAAAGGAATACGTCGTATATA
GTTTCCGATGCACACATGCTTCCTCTGTTCAACTGCAAGAGGAAGGGGGG
GTGGGTACGAGTTACTTTTTGAAGTATTCGATTGGTGTGCGAGTGTTCCA
GACGGAATATCCTGAACCCCCTGCCCCTGGTAGCTGATAAATGCAGCAGC
AAATAACAAGATAACAAACTAAGTATCGAACGCCAAGCGGGAGTAGGAAC
TCTGCCCCATCAGCACGAGCTAAAAAAATAATAATGGCGAGTTCAACAGC
CCGTGCGCTTTTTCTTGCTAAGGATAAATTTTCCAACAGTAAAACAGCGT
TGACAACAAAAACAACAACATGGGCAGTACGGTTTCGAACAGCACAATTC
TTATAAATAGGAAAAAACAAAGCAAATACTGGCATCAACAGAAGAACGAT
GGTATGCTAGGTCAAACTTTATACTGCTGAGTGACTGGCTGATTTCACAC
ATGGAAAAAATCGAGGAGCGCAGCTCTCGTAGTTCTGAATACAACTCAAG
TCCGAAAAGCGTTCAGCCCTTGCGAACAGGATTTCGTAACGACCAAAAGA
GAGATTGTTGCCAACGACCAGTCATGGATAGTAGTGGATAGTGACTAGAT
CTCAACAGAATGCCTTCACTAGCTCTAGACAGCTGGTAAGTGCATCTCAG
GTGCAAAAGAGGGTGTACTCTTTTCTGTTTTGAGGGTGCTTATCTTGGAT
TTAGTTATAGACCAAAAACGGGCAAACCCCTGCTTTTTTCGTAACGGTGA
AATAATACACAAGCACTTCGCAGCTGATCACGGACGGCAGAAGTTCCTAA
AGGTGTAAGCTTAAGCCGAGGAAGGACGCGGGGCGCACGCCTCTTGCCAA
GGGCGGCTTCGACAGCAAGGCAGTATGGACAAGATGGAAATGCGGCGATG
AACATGCCAGTAACCACGAAGAAAAATAAGGTTTGATATTTGTTCAATCT
CATACTGCTGAGCGACTCATTCCACACCCGACCAAACTAATGCGATATGA
ACATCACACACACACACACACACACACACACACACACACGTGATTTGAAT
CATAACTCCATCTTCCCCTGTCGAGGTGGATTGATTGAATTGCCTCTTTT
CTGCAGTTGATCTTCCTATTCGCTCGTCGTGCTCCATTATCTTTTTTCAG
GGGGTTTGTGACGAATATCCCCGTTTTCTCTGTGCGTATTCGACACATTA
GCGATCCTCATTCACCACTGTAGCAAGCGACCACTCCGGACAACCAACAA
CGGCAGACCTACCACTATAAATTTTTTAGGGGTAGGCGAGAGGCGTGTTC
GGTGTTCTTTTGGTCTTGCTCCCACATTAGTTGTCTTGTGATCAAGTCAT
CACCTAGCAATATCGTAATATCTGCGCATACTTCGGCGTGTGGTTTATGG
CTATACGGTTCTGTTACTCAAGGTTTCAGCTGAAACACGGGCTGTAATCC
CGGTTCTCCAGACCGTGTCTCCATGGATTGGCTCTCGTTCCTTCGTTTTT
TTCAATTTATGGAGGGACAAATACGCCGGCAACGTTAAGATGCTGACCAT
ACGTCCATTTTATTTTTACGGTCATTTTCCATGTTTTTACACTTGATAAT
TGATCTTTTTGGTACATTTGAATCATTTTTCGCTCCATCAAGAAGAACTC
TGTAGTGTTTTTCCAAACCATATTCTCAGTCTAGCCCTTCGTTCCCCCTC
CCCTATCTATCTCCATCACCCACAGCTCGCTCGTATACCACCTCCCCGCC
GTTTCCGTTTGAACTGGTCGTTATGTACTGAATCGGTCGTTACGCAATAC
CATGGTCGTTACATATCCTACTTGGTCGTTGTACAAATGACGTGTTTGTC
AGGTCCTGACGTCATCGTTACGGGTACTGCATTGGCGGTTATATACTGAT
ATGGTTGGTCGTTATGTGCTGACTTGGCAGTTATACTGACACGGTTGTTA
CATACCGACTTGGTCGTTACACGGTGAGTTGATTGTTGTGCACTGTTATA
CTCGCGAAGTTGTTACACGTGACAAAACAAGATTTTGTCGTAGCCCCGAT
CTCCGGGGAAAACGCCTTCCAAGGGTAGGAATATGAGACCCGTGCGCTCT
CCAATTCTACTTCAAATTCCAAACCCGATATTATCATGAAAGAGTGTGCC
TGATGAAAAAACTGCGAAACAAGCTTTGTTAAGCCAGGGCGTCCATCAAC
ATTCGCTCCTTTTGTCAGGTGTTGTAGCTCATGTCGTGTTTTCTTCTTTT
GTCGACTGGAGCTCATCATCGTGCCCCTGATTCTTGTGGTCAAGTCTTCA
CTTTTTTTGTTGCTAAGCTTGCTTGTTTTGTCCCTCTCTCCCATGTATTT
TCATCGGTCCTCTCGAGGATGCGTGGTCAGTTGTCGTACAACTCCGTGAT
GCAAAACAAGAGTACCCCCCCCCCCCCTCCTAGTTTGCTTACTTTATAAA
TAAGTAGTTTTCAGCAACATTGAAAGTATTGAGCACACCTGCTCCCAAAT
TGACTGTTTTTTAATTGCTCCCCCCGGTACTCCCCCGTATTTTTTTCTAT
TGGCGTATGTATATGTTGTGAATATTTACGTTATGTGTGTATATAAACAC
ACACGCACAAGCAGATTGATCTCGCAAAGCTTGCCGATCTTCGTCCGGCG
TTTCAAAAAGAGGGAGGGACCGTTACCGCAGCCAACGCGTCGAGCCTCAA
CGATGGTGCTGCCGCCCTCGTACTCATGAGCCTCCAGAGGTAATTTCAGT
CGCAGAGCTTAGAGACAGACTACTTCAGATTGACTCGTTCCCGCCACCGA
CCAACCAACCACGCTGCAGATTGGTCATTCAAATTGTCGGTAAATACGTC
CTGGTTGTTGACGGACGAACTCCGGCGATAAATTCTTCTTTATCACTGTT
ATCTCGTTTATTCTGCTGGTCGCCCGTCCTCTCTCGAAAATTTCTTTTCT
TTTCTCACGGCGTGTTGACAAGATGCTTGTTCAGATACAAGCAATTGACT
GTCCTGCTGTCCATCAAAATGTTCGCGATTGAACCCCCCCCCCCCCAAAA
AAGCTACGCGAAAACAGGATTATGCGGTCGGAGAGATGATCGATGAAGTG
TATCTGAAATCATAACGGGGGATACTCACGGGACAGCGGAAGTATATACC
GGTATATGCGGGGTATTTTCGTCTTCCTCCATACCTCAACTTACTGTGCC
CTTGCTCCTAAACGCTCGAGTTTCTTCTCTTTTCCTACATGAAACCCAGG
GCCGAGGAGCTCGGTGTACAGCCACTAGCACGCATCATGGGCTACGGAGA
TGCGGCGAGGGTGAGCTAAAGGGGGGGGAGGGGGGGGGGCTACGGTAACC
TTTAGAAGGGAATATCACTGTATCACTCGCATGTGTAGTGTAGTATTAAA
ACATGAAGTAGTTTTCACGTTAACAACATATATCCTCCAGAAAAATTTCA
TGCATAAATCAACGCTGCCGTAGTCAGTTTCGAATTCGAACTATAGCTCT
GAAGTCGACATAGTAACACTCCGCTGCACCCATGTTGAGATTAAGCCTCA
ACCGTTCATACTTACCAGCGAAATTAGATCATCAAGAGGGCGCTAAGTTG
TAACGCTCATATAGTAGCTCCATCCATCCTACCCGTGGTGAGGTTTATGC
AGCTGGCCTCAAATTTCAGTTGTGTACGCTTATCAGAAAAATTAGATAAT
GACTAATGAAGGGGAGGGAGGTGACTTGTGTTTTACGGGTCACAGTTGAT
AGACCATTGACCAAGGGTTTTCGAGAGGGCGGAGCTTTGTTCTTATTGTT
CGTTCCTATTGTTCGTAGACGGTGGGAGGAGGGGAGCGGGAGCGGGGGGG
GGCGGGGGGCAAGGCATCACCTCCACCAGTTAAACATTTGGCCTTACCGG
TCGACACGTTCTCTTCCTTCAAGCAATAAATTAAATCAGTAATGATTTTA
GTACATGCATACTATGTTGAGTTTCTTTAGCCTGCGGTCGCAATGGCTAT
TTATACTCATTTTCAACGAATTTTGAAAGAGAGAGGTGAGGAAAGGTGCC
CGAATATTGTGCTGTCGGCGTAGCTTTTGAAAAACGAAATAAGCTCATTG
GTTTTGCAAAAAAAAAAAAATGCATGGCAATATGACGGTATTCAAATCGA
TGGCGGCATGCCTTTTTCCAAGTTTTTTTTTTTTTTTTAGATCATGGATG
GCAGCGTCTTGTGATCGGTGACGACTGTGCTGGAAAACACTCGGATACAG
AGGCCAAAGATGTTCTGAAAATAAAGACGTTCTTCGTCACGAAAACACGT
GAATACAATCTGTAGGAAATATAATTTCCCAGAACTTGCTGTCGAGTTCA
ATCAAAAACTATGACAGTTTCTTTTTAGTTGAAAAAAAAAAAAAAGCCCC
ATCAAATTTCAACCATAAGGCCATTCACTTTACGTCTGATAGAATAAAAA
ATTGTAAGTTAACTTGCTCAACTATTGTCACCAATTTTATAAAAATAGGA
AATAATATATATATATATATATATATATATATATATATATAACGTTGCGA
TGGCAGGGGGGGGGGGGGGGTATTTACCGCTGATCGTACGGTTTGGCCGC
AAAGCGATTTTTTTCCCTTTACGGTGTCGTACCGTACTGAAGGCTTATGT
TTTCTGGCGGTAAATATTGTTGTTACTATTTTGCCGAGCAGTCATGCTTG
GTCCTTCCCGGGCACATGAAATAATTAAATAGAAGTGCTTATTATTCGGA
AACCCGGGCGGATATTTGCTTCAAGCAGTGGCAAATAGTCCTAGTCGTCC
GTGGTGCAACGCTTCCGTTTCGGAAGGTCGTTCGTTCTGCTTCAAGCAGA
TTGCAGTACGAAAGAGATCCCTGTCTAAATGATTGATTGGCGCCCGTTTT
ATGCTGATGCCGACAGAATAACCTTAGAACACGTATTCTGTCCGACATGC
GGCTGTTGATGGTTTGTTTCGTATCTTCTGTCTCGATGAAAGCGCATGAA
GCCATACAAATAGCTGCAACACGTAACTCAATACACTCTTGTACGTAGCC
CTCTTCAATTAGAGTGTCCTCCCCCGACCCCCCCACCCCGGGTAAATGGC
TTTGGTCGGGCAAAAACGCCTCTTCCAAACCCCACCCCTACCCCTACGCC
TACCTCTACCCCTAAAAACACTTATGCGTCAGGCACCCGTGGAGTTTACC
GTCGCTCCTTCGGATGCGGTGCCGGTGGCCCTGAAAAACGCGGGGATTAC
GCTCGGCGATGTGGATTTCCACGAGATCAATGAGGCGTTTAGCGTCGTCG
CGCTGGCCAACATGCAGGTATTGACGGGGACACTGAGCAGAGTTGCAGTA
CACAGGGCAATGTATGTTATTGTCTATTGTGATCTTTTTTGTTATTGTCC
ATCGTCTGGTGTCTGGTGTCTGGTGTCTGTTGCATATCCTTCGATTGCGT
GACCGTTTTAACCTCCCCCCCCCCCCCCTCCCCTGTTGTTCTGTTTCTGT
ATAAATAATCCAGCAGTTCGAAAACGTCAAGCGTATCTCCTTTTTGTGGT
GAATATAATTCTCCCTTTATTGATGTACACACAACGGGATTTTCAGCTCC
GTTGCATAAGCCCACCATGGGTACAACGAAATCATTCTATTATATGAACG
TTAGAGCTTGGTTCTATTAGCTGTGTTAAGTGGGTTAATTTAGGCCATTG
CTCCCCCTCCCTCCCTCCGCTAAGTTGAACCTCCAACATGGGCGCTTGAT
ATGTGTGTGGAGTCTTTTTAGTGTACAACGCTTGCTTGCTCAAGAGGATG
TCTGCAACATCAATGCAGGCCCATCGGGAATACCCGCAAAAAAGTACTAC
TGTAATACTGTATTGTTGGAAATTTCTGGAAATGGAAATTTCTGAAAATG
GAAATTTCTGAAAATATTGAAGGAAGAAAATGACAAACGTGACAGCTGAC
GTCTAATCCGTCCAGATTGTTATCGTCGGAAGTCCGGCCCGTGGCATGCA
TAGCCCCCCCCGCCCCCCCGCCCCCCCTACTGAGGTTAGTTTGCTAATTA
GGTCACTCAGCAGTATCAAATTGACTTTAAGCGTACCTCCAATATTGATT
GATGGTACTTGTCAGTTTTTTTGTCGTACTTCGTGCGTGCATCAAGCCAT
ATTGCCGTGTTCCTGTCGACGCCATGATGTCTGTCCTGTTGTGTCGTGGC
ATTGCCCTTTGCAAGAGGTGTATATGCTGGAACACGGGAATATCCCGCCC
TTCGGTAAATACCCCGCTAACGTTCCGCTTTACATGCCGTACCCCTCCTC
TCCGTGTATTTGACGTGCAACAATATCGAAAAATATCCCGCTCTTTGTCA
AATTCCCCGCCGACCATCCCACTTACATGCTCTATCCCTCCTCTCTGTGT
ATTTGACGCGCAACAACGTAAAATAATATCCCGCCCTTCGGTAAATGCCC
CGCCGATATCCCCCACTCCATGTTTCATCCTCTAGCCCAGTTTTGATTTG
AATTTTCTCCAGGGGCCGTCATAGAGGCCATCTGTAGAACATATCTCCAC
TCTTCCCCCCCCTTGGTTAGGTCCGGTTGTGGACAAATAATCTAGCGGCT
TGAAGGTGCTGAACACCCAATTCCCCCCCCCTCTCCACCCCTTGGACAAA
TTTTGTAAAATCCTGAAAAAAGAAATTGGCTAATTTTCGGCATAGATATG
TTTTTTTGCAAGCTTTGAAACCTGATATTTGTGCGACAATCCTCGGTCCC
CTTGGTTGTGACTGTTCTGATGGGAAAAGCTCGTTCTTCTCGGCCGCGGC
GTGCGTGTGTTCTCTCCTCTTACTGTTGCCGAAACAAGTTGATGGGCCTG
GATCCTGCCAAAGTGAACGTGAACGGCGGAGCTGTAGCGCTCGGACACCC
GATTGGGTGAGATGCGAAGAATAGAGAGAGCTATATATATAGCTCATCAC
CCTATGTTTACAGGTTTTGTTTTCGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTTTTTAACTTCATGAATAGAGAGATTGTGTGTTCGAAAA
CAAATACTTGGATGTATTCGTAAAACATTCTGATCGGTCCTGTGTGGATA
AATGGTGAGCCAGATCAAGTTCCCGGATCCAAGTCTACCTGCACCAACTT
CATGAAACAAAAACGATTTCCTCTTCAATATTTTGGAATTTTCGCGATGA
TTTTTATGAAATGTGATGGGTTGTGGAGAATGTTTTGTATTCTAGCGAGA
CTTCGTTGTAAGCGTGGACTGGGGGTCCAGGGCCTGCAGTTCGGTATGAG
CCATGCAGGGCCAAGCAGAAATATATAAACATATACCTGTTTTCGCAAAC
GCCTTCATGTCTGCGGAGTTTTCATGCCGAGTGCGCGTTAGTTTCGTCTG
TTTAGTCGGGAGGGGGGGGGGGTTGTTACGTTGTTGAAGCTGTCCGTTTT
CTCAATTCCAAGGCATATTTTGCTGTTTTCGGTTTGTACTCCTTACGCGT
ACATCTTCTATCGTAATGTGGCTCTGATATTTTTAGAAAATATTGCTTTG
TGATTTACCACGTTTTGAAAAAAACCGAAGGACAAAAATATGTGTGATGC
TTCAATTTTCACCGGAACCAGTTATCCCCTTGCTCTCCATATATATATAT
ATCATGGTCATTGGAGTTTGCGCATCTATTCATGTGTACCTGTTTGTTAA
CCATCCAATGCGGCATGAACACATACTTGAAACGCACGATCATGATTTGT
ATCTACAACCATGTTGATATGCTGCTGCCCCCTGTTGTTACATACTGCTG
CTGCTCCCTATCTTGTGTCATTTCGTGGGCGATGTCTTTTCTTCAGCTCG
TCGGGAGCCCGCATCATTTGTTCGCTATATCACGTCCTCAAGCAAAACGA
CGGTGTGATAGGCTGCGCCAGCATCTGCAACGGGGGAGGGGGGGCATCTG
CCATCGTCATCGAGCGTTTGTCATGA
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig1653:254..9179+

>mRNA_H-paniculata_contig1653.3718.1 ID=mRNA_H-paniculata_contig1653.3718.1|Name=mRNA_H-paniculata_contig1653.3718.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1536bp|location=Sequence derived from alignment at H-paniculata_contig1653:254..9179+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGCATCGTTCATGACGGACTGTGGGACGTGTACAACGATCACCATATGGG
TATTTGCGCCGAGCTGTGCTCCCAGACGTACTCCATCGGTCGTGAGGCAC
AAGACAAGCATGCCACGGAGAGCTACGAGCGGGCTGCTCTAGCTTGGCAG
CAGGGCATCGTTCATGACGGACTGTGGGACGTGTACAACGATCACCATAT
GGGTATTTGCGCCGAGCTGTGCTCCCAGACGTACTCCATCGGTCGTGAGG
CACAAGACAAGCATGCCACGGAGAGCTACGAGCGGGCTGCTCTAGCTTGG
CAGCAGGGTAAGTTCGACGACGAGACTGTTGCAGTTGAAGTCCCGGCGAC
AAAGCGAGGTCGTCCACCGTCGACCATCACCAAAGACGAGGAGTACACAA
ATGGTAAGTTCGACGACGAGACTGTTGCAGTTGAAGTCCCGGCGACAAAG
CGAGGTCGTCCACCGTCGACCATCACCAAAGACGAGGAGTACACAAATAT
TGATCTCGCAAAGCTTGCCGATCTTCGTCCGGCGTTTCAAAAAGAGGGAG
GGACCGTTACCGCAGCCAACGCGTCGAGCCTCAACGATGGTGCTGCCGCC
CTCGTACTCATGAGCCTCCAGAGATTGATCTCGCAAAGCTTGCCGATCTT
CGTCCGGCGTTTCAAAAAGAGGGAGGGACCGTTACCGCAGCCAACGCGTC
GAGCCTCAACGATGGTGCTGCCGCCCTCGTACTCATGAGCCTCCAGAGGG
CCGAGGAGCTCGGTGTACAGCCACTAGCACGCATCATGGGCTACGGAGAT
GCGGCGAGGGGCCGAGGAGCTCGGTGTACAGCCACTAGCACGCATCATGG
GCTACGGAGATGCGGCGAGGGCACCCGTGGAGTTTACCGTCGCTCCTTCG
GATGCGGTGCCGGTGGCCCTGAAAAACGCGGGGATTACGCTCGGCGATGT
GGATTTCCACGAGATCAATGAGGCGTTTAGCGTCGTCGCGCTGGCCAACA
TGCAGGCACCCGTGGAGTTTACCGTCGCTCCTTCGGATGCGGTGCCGGTG
GCCCTGAAAAACGCGGGGATTACGCTCGGCGATGTGGATTTCCACGAGAT
CAATGAGGCGTTTAGCGTCGTCGCGCTGGCCAACATGCAGTTGATGGGCC
TGGATCCTGCCAAAGTGAACGTGAACGGCGGAGCTGTAGCGCTCGGACAC
CCGATTGGTTGATGGGCCTGGATCCTGCCAAAGTGAACGTGAACGGCGGA
GCTGTAGCGCTCGGACACCCGATTGGCTCGTCGGGAGCCCGCATCATTTG
TTCGCTATATCACGTCCTCAAGCAAAACGACGGTGTGATAGGCTGCGCCA
GCATCTGCAACGGGGGAGGGGGGGCATCTGCCATCGTCATCGAGCGTTTG
TCATGACTCGTCGGGAGCCCGCATCATTTGTTCGCTATATCACGTCCTCA
AGCAAAACGACGGTGTGATAGGCTGCGCCAGCATCTGCAACGGGGGAGGG
GGGGCATCTGCCATCGTCATCGAGCGTTTGTCATGA
back to top