mRNA_H-paniculata_contig16486.3695.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-paniculata_contig16486.3695.1
Unique Name	mRNA_H-paniculata_contig16486.3695.1
Type	mRNA
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)

Homology

[Close]

BLAST of mRNA_H-paniculata_contig16486.3695.1 vs. uniprot
Match: D8LNM6_ECTSI (DDE_3 domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LNM6_ECTSI)

HSP 1 Score: 356 bits (913), Expect = 6.470e-104
Identity = 185/289 (64.01%), Postives = 222/289 (76.82%), Query Frame = 3

Query: 3375 FIDDSVQKLKPRTGEVLCNVQSKLILMLLFALRKDGVSENQPVLQVASTFKIGHSKVSGVNNHWWDHNTLLETTGEGRGKVTKNDDGRRRITQDQEDQLYKFINDEHKAGRQVFRRTVEEWMMDHCNPDKEVSNRAVGGLLQRLGYRCRRGRIKTPPLDAKRLARIRLFLVEMNIAKRAEDAGLAVLVYMDESFVHQAHGSTYSYFPTDQNGVVEDEMDRTMGKGLRMIMVHESRSGARWLRVVPIISFKSKRVGLSVRKTIGESKGGKDFNMIDEKTAEFLWQAKLAK 4241
            ++D SV ++KP+ GEV  ++QS+++LMLLF LRK+G SEN+ VLQVA TFKIGH KV  +NNHWWDH  L ETT  GRGK+ K DDGRRR+T+ Q DQL +FINDEHKAGRQVFRRTV EW+   CN + + SNR+VGGLL RLGY+ RRGRIKTPPL+A+RLARIR FLVEM++AKRAEDAGLAV+VYMDESFVHQAHGS YSYFP+D+NGVV+D + RT GKGLRMIMVH      +W    P+  F     G  + +   +  G     M DE+TAEFLWQAKLAK
Sbjct:  117 YMDTSVHEVKPKKGEVWTHLQSRMVLMLLFDLRKEGRSENEAVLQVARTFKIGHDKVRRINNHWWDHRQLYETTAAGRGKMAKEDDGRRRLTEVQADQLREFINDEHKAGRQVFRRTVAEWVHRTCNME-QPSNRSVGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDENGVVQDGIGRTTGKGLRMIMVHAI---TKW---GPLAKFCD---GFPIEEGWFKETGSGKKKMEDEETAEFLWQAKLAK 395

[Close]

BLAST of mRNA_H-paniculata_contig16486.3695.1 vs. uniprot
Match: A0A6H5KAU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAU4_9PHAE)

HSP 1 Score: 343 bits (881), Expect = 4.150e-102
Identity = 179/289 (61.94%), Postives = 214/289 (74.05%), Query Frame = 3

Query: 3375 FIDDSVQKLKPRTGEVLCNVQSKLILMLLFALRKDGVSENQPVLQVASTFKIGHSKVSGVNNHWWDHNTLLETTGEGRGKVTKNDDGRRRITQDQEDQLYKFINDEHKAGRQVFRRTVEEWMMDHCNPDKEVSNRAVGGLLQRLGYRCRRGRIKTPPLDAKRLARIRLFLVEMNIAKRAEDAGLAVLVYMDESFVHQAHGSTYSYFPTDQNGVVEDEMDRTMGKGLRMIMVHESRSGARWLRVVPIISFKSKRVGLSVRKTIGESKGGKDFNMIDEKTAEFLWQAKLAK 4241
            ++D SV ++KP+  EV   +QS+++LMLLF LRK G  EN+ VLQVA TFKIGH KV  +NNHWWDH  L ETT  GRGK  K DDGRRR+T+ QEDQL +FINDEHKAGRQVFRRTV EWM   CN + + SNR+ GGLL RLGY+ RRGRIKTPPL+A+RLARIR FLVEM++AKRAEDAGLAV+VYMDESFVHQAHGS  SYFP+D++GVV+D + RT GKGLRMIMVH      +W  +  +        G  + +   +  G     M DE+TAEFLWQ KLAK
Sbjct:   56 YMDTSVHEVKPKKDEVWTQLQSRMVLMLLFDLRKGGCCENEAVLQVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNME-QPSNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPCSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAI---TKWGPLAKLC------YGFPIEEGWFKETGSGKKEMEDEETAEFLWQVKLAK 334

[Close]

BLAST of mRNA_H-paniculata_contig16486.3695.1 vs. uniprot
Match: A0A6H5JMA8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMA8_9PHAE)

HSP 1 Score: 342 bits (876), Expect = 7.480e-101
Identity = 193/326 (59.20%), Postives = 230/326 (70.55%), Query Frame = 3

Query: 3270 EAARKTACAEQREQEVVEA--AAHAAQQPKLSQAAHTFIDDSVQKLKPRTGEVLCNVQSKLILMLLFALRKDGVSENQPVLQVASTFKIGHSKVSGVNNHWWDHNTLLETTGEGRGKVTKNDDGRRRITQDQEDQLYKFINDEHKAGRQVFRRTVEEWMMDHCNPDKEVSNRAVGGLLQRLGYRCRRGRIKTPPLDAKRLARIRLFLVEMNIAKRAEDAGLAVLVYMDESFVHQAHGSTYSYFPTDQNGVVEDEMDRTMGKGLRMIMVHESRSGARWLRVVPIISFKSKRVGLSVRKTIGESKGGKDFNMIDEKTAEFLWQAKLAK 4241
            E AR  A  E REQ+ VE   AA AA   K++Q    ++D SV ++KP+ GEV   +QS+++LMLLF LRK G SE + VL+VA TFKIGH KV  +NNHWWDH  L ETT  GRGK  K DDGRRR+T+ QEDQL +FINDEHKAGRQVFRRTV EWM   CN + + SN + GGLL RLG + RRGRIKTPPL A+RLARIR FLVEM +AKRAEDAGLAV+VY+DESFVHQAHGS YSYFP+D +GVV+D + RT GKGLRMIMVH      +W  +  +        GL + +   +  G     M DE+T EFLWQA LAK
Sbjct:  113 EMARAAAPREMREQQDVERVQAAAAAAAEKVAQGLD-YMDTSVHEVKPKKGEVWTQLQSRMVLMLLFDLRKGGCSEKEAVLKVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNME-QPSNGSAGGLLSRLGCKRRRGRIKTPPLKAERLARIRRFLVEMVMAKRAEDAGLAVIVYVDESFVHQAHGSPYSYFPSDDDGVVQDGIGRTTGKGLRMIMVHAI---TKWGPLAKLCD------GLPIEEGWFKETGSGKKEMEDEETVEFLWQATLAK 427

[Close]

BLAST of mRNA_H-paniculata_contig16486.3695.1 vs. uniprot
Match: A0A6H5KIM5_9PHAE (DDE_3 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIM5_9PHAE)

HSP 1 Score: 328 bits (841), Expect = 2.430e-94
Identity = 172/269 (63.94%), Postives = 202/269 (75.09%), Query Frame = 3

Query: 3435 QSKLILMLLFALRKDGVSENQPVLQVASTFKIGHSKVSGVNNHWWDHNTLLETTGEGRGKVTKNDDGRRRITQDQEDQLYKFINDEHKAGRQVFRRTVEEWMMDHCNPDKEVSNRAVGGLLQRLGYRCRRGRIKTPPLDAKRLARIRLFLVEMNIAKRAEDAGLAVLVYMDESFVHQAHGSTYSYFPTDQNGVVEDEMDRTMGKGLRMIMVHESRSGARWLRVVPIISFKSKRVGLSVRKTIGESKGGKDFNMIDEKTAEFLWQAKLAK 4241
            +S+++LMLLF LRK G SE + VL+VA TFKIGH KV  +NNHWWDH  L E T  GRGK  K DDGRRR+T+ QEDQL +FINDEHKAGRQVFRRTV EWM   CN + + SNR+ GGLL RLGY+ RRGRIKTPPL+A+RLARIR FLVEM +AKRAEDAGLAV+VYMDESFVHQAHGS YSYFP+D++GVV+D + RT GKGLRMIMVH      +W  +  +        GL + +   +  G     M DE+TAEFLWQAKLAK
Sbjct:  103 ESRMVLMLLFDLRKGGCSEKEAVLKVARTFKIGHDKVRRINNHWWDHRQLYEITAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNME-QPSNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMVMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAI---TKWGPLAKLCD------GLPIEEGWFKETGSGKKEMEDEETAEFLWQAKLAK 361

[Close]

BLAST of mRNA_H-paniculata_contig16486.3695.1 vs. uniprot
Match: A0A6H5KKL0_9PHAE (DDE_3 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKL0_9PHAE)

HSP 1 Score: 321 bits (823), Expect = 5.810e-94
Identity = 169/266 (63.53%), Postives = 200/266 (75.19%), Query Frame = 3

Query: 3444 LILMLLFALRKDGVSENQPVLQVASTFKIGHSKVSGVNNHWWDHNTLLETTGEGRGKVTKNDDGRRRITQDQEDQLYKFINDEHKAGRQVFRRTVEEWMMDHCNPDKEVSNRAVGGLLQRLGYRCRRGRIKTPPLDAKRLARIRLFLVEMNIAKRAEDAGLAVLVYMDESFVHQAHGSTYSYFPTDQNGVVEDEMDRTMGKGLRMIMVHESRSGARWLRVVPIISFKSKRVGLSVRKTIGESKGGKDFNMIDEKTAEFLWQAKLAK 4241
            ++LMLLF LRK+G +EN+ VLQVA TFKIGH KV  +NNHWWDH  L ETT  GRGK  K DDGRRR+T+ QEDQL +FINDEHKAGRQVFRRTV EWM   CN + + SNR+  GLL RLGY+ RRGRIKTPPL+A+RLARIR FLVEM++AKRAEDAGLAV+VY+D SFVHQAHGS YSYFP D++ VV+D + RT GKGLR+IMVH      +W  +  +       VGL + +   +  G     M DE+TAEFLWQAKLAK
Sbjct:    1 MVLMLLFDLRKEGRAENEAVLQVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNME-QPSNRSAEGLLSRLGYKGRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYIDGSFVHQAHGSPYSYFPADEDEVVQDGIGRTTGKGLRVIMVHAI---TKWGPLAKLC------VGLPIEEGWFKETGSGKREMEDEETAEFLWQAKLAK 256

[Close]

BLAST of mRNA_H-paniculata_contig16486.3695.1 vs. uniprot
Match: A0A6H5JWS3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWS3_9PHAE)

HSP 1 Score: 299 bits (766), Expect = 9.970e-89
Identity = 158/245 (64.49%), Postives = 182/245 (74.29%), Query Frame = 3

Query: 3507 QVASTFKIGHSKVSGVNNHWWDHNTLLETTGEGRGKVTKNDDGRRRITQDQEDQLYKFINDEHKAGRQVFRRTVEEWMMDHCNPDKEVSNRAVGGLLQRLGYRCRRGRIKTPPLDAKRLARIRLFLVEMNIAKRAEDAGLAVLVYMDESFVHQAHGSTYSYFPTDQNGVVEDEMDRTMGKGLRMIMVHESRSGARWLRVVPIISFKSKRVGLSVRKTIGESKGGKDFNMIDEKTAEFLWQAKLAK 4241
            QVA TFKIGH KV  +NNHWWDH  L ETT  GRGK  K DDGRRR+T+ QEDQL +FINDEH+AGRQV RRTV EWM   CN + + SNR+ GGLL RLGY+ RRGRIKTPPL+A+RLARIR FLVEM +AKRAEDAGLAV+VYMDESFVHQAHGS YSYFP+D +GVV+D + RT GKGLRMIMVH      +W  +  +        GL + +   +  G     M DE+TAEFLWQAKLAK
Sbjct:   32 QVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHQAGRQVSRRTVAEWMHRTCNME-QPSNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMVMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDDDGVVQDGIGRTTGKGLRMIMVHAI---TKWGPLAKLCD------GLPIEEGWFKETGSGKKEMEDEETAEFLWQAKLAK 266

[Close]

BLAST of mRNA_H-paniculata_contig16486.3695.1 vs. uniprot
Match: A0A6H5KDX2_9PHAE (Uncharacterized protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX2_9PHAE)

HSP 1 Score: 312 bits (800), Expect = 1.020e-88
Identity = 183/319 (57.37%), Postives = 220/319 (68.97%), Query Frame = 3

Query: 3297 EQREQEVVEAAAHAAQQPKLSQAAHTFIDDSVQKLKPRTGEVLCNVQSKLILMLLFALRKDGVSENQPVLQVASTFKIGHSKVSGVNNHWWDHNTLLETTGEGRGKVTKNDDGRRRITQDQEDQLYKFINDEHKAGRQVFRRTVEEWMMDHCNPDKEVSNRAVGGLLQRLGYRCRRGRIKTPPLDAKRLARIRLFLVEMNIAKRAEDAGLAVLVYMDESFVHQAHGSTYSYFPTDQNGVVEDEMDRTMGKGLRMIMVH---ESRSGARWLRVVPIIS--FKSKRVGLSVRKTIGESKGGKDFNMIDEKTAEFLWQAKLA 4238
            E+REQ+ V  AA AA   KL   A  F++DSVQ L+P+TGE+    QS++ILML F L K G SEN    QVA T +IG  KV  V   W+D   L ET G+GRGK T  DDGRR IT++QED L +FI  EH+AGRQVFRRTV++++   C+   E+SNRAVGGLLQRLG++ RRGRIK PPL+ +R  RIRLFLV+M++AKRAEDAG+AV+VYMDESFVHQAHGS YSYFP+D  G+V+D + RT GKGLRMIMVH   E    A      PI    FK+K       K      G  DF M DE+TAEFLWQAKLA
Sbjct:   58 ERREQDRVSKAAEAATS-KLPPLALKFVEDSVQSLRPKTGELTTLQQSRIILMLYFDLVKGGSSENHAKEQVAKTLRIGTDKVLAVRTLWYDKQELYETNGKGRGKATSVDDGRRVITKEQEDGLREFIKGEHEAGRQVFRRTVKDYL--ECSFGLEMSNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKRAEDAGIAVIVYMDESFVHQAHGSAYSYFPSDDKGIVQDGIGRTTGKGLRMIMVHAITEHGPLAELQEGFPIREGWFKAKENRAKKIKP-----GEADFEMSDEQTAEFLWQAKLA 368

[Close]

BLAST of mRNA_H-paniculata_contig16486.3695.1 vs. uniprot
Match: A0A6H5KDX7_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX7_9PHAE)

HSP 1 Score: 306 bits (785), Expect = 1.460e-88
Identity = 160/246 (65.04%), Postives = 186/246 (75.61%), Query Frame = 3

Query: 3504 LQVASTFKIGHSKVSGVNNHWWDHNTLLETTGEGRGKVTKNDDGRRRITQDQEDQLYKFINDEHKAGRQVFRRTVEEWMMDHCNPDKEVSNRAVGGLLQRLGYRCRRGRIKTPPLDAKRLARIRLFLVEMNIAKRAEDAGLAVLVYMDESFVHQAHGSTYSYFPTDQNGVVEDEMDRTMGKGLRMIMVHESRSGARWLRVVPIISFKSKRVGLSVRKTIGESKGGKDFNMIDEKTAEFLWQAKLAK 4241
            +QVA TFKIGH KV  +NNHWWDH  L ETT  GRGK  K DDGRRR+T+ QEDQL +FINDEHKAGRQVFRRTV EWM   CN + + SNR+ GGLL RLGY+ RRGRIKTPPL+A+RLARIR FLVEM++AKRAEDAGLAV+VYMDESFVHQAHGS YSYFP+D++GVV+D + RT GKGLRMIMVH      +W  +  +        GL + +   +  G     M DE+TAEFLWQAKLAK
Sbjct:    9 VQVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNME-QPSNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAI---TKWGPLAKLCD------GLPIEEGWFKETGSGKKEMEDEETAEFLWQAKLAK 244

[Close]

BLAST of mRNA_H-paniculata_contig16486.3695.1 vs. uniprot
Match: A0A6H5JR41_9PHAE (DDE_3 domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR41_9PHAE)

HSP 1 Score: 302 bits (773), Expect = 5.920e-85
Identity = 160/246 (65.04%), Postives = 185/246 (75.20%), Query Frame = 3

Query: 3504 LQVASTFKIGHSKVSGVNNHWWDHNTLLETTGEGRGKVTKNDDGRRRITQDQEDQLYKFINDEHKAGRQVFRRTVEEWMMDHCNPDKEVSNRAVGGLLQRLGYRCRRGRIKTPPLDAKRLARIRLFLVEMNIAKRAEDAGLAVLVYMDESFVHQAHGSTYSYFPTDQNGVVEDEMDRTMGKGLRMIMVHESRSGARWLRVVPIISFKSKRVGLSVRKTIGESKGGKDFNMIDEKTAEFLWQAKLAK 4241
            +QVA TFKIGH KV  +NNHWWDH  L ETT  GRGK  K DDGRRR+T+ QEDQL +FINDEHKAGRQVFRRTV EWM   CN + + SNR+ GGLL RLGY+ RRGRIKTPPL+A+RLARIR FLV MN+AKRAEDAGLAV+VYMDESFVHQAHGS YSYFP+D++GVV+D + RT GKGLRMIMVH      +W  +  +        GL + +   +  G     M DE+TAEFLWQAKLAK
Sbjct:  137 VQVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNME-QPSNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLV-MNMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAI---TKWGPLAKLCD------GLPIEEGWFKETGSGKKEMEDEETAEFLWQAKLAK 371

[Close]

BLAST of mRNA_H-paniculata_contig16486.3695.1 vs. uniprot
Match: A0A6H5JWX3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWX3_9PHAE)

HSP 1 Score: 279 bits (714), Expect = 9.560e-82
Identity = 148/230 (64.35%), Postives = 173/230 (75.22%), Query Frame = 3

Query: 3552 VNNHWWDHNTLLETTGEGRGKVTKNDDGRRRITQDQEDQLYKFINDEHKAGRQVFRRTVEEWMMDHCNPDKEVSNRAVGGLLQRLGYRCRRGRIKTPPLDAKRLARIRLFLVEMNIAKRAEDAGLAVLVYMDESFVHQAHGSTYSYFPTDQNGVVEDEMDRTMGKGLRMIMVHESRSGARWLRVVPIISFKSKRVGLSVRKT-IGESKGGKDFNMIDEKTAEFLWQAKLA 4238
            +NNHWWDH  L  TT  GRGK  K DDGRRR+T+ QEDQL +FINDEHKAGRQVFRRTV EWM   CN + + SNR+ GGLL RLGY+ RRGRIKTPPL+A+RLARIR FLVEM++AKRAEDAGLAV+VYMDESFVHQAHGS YSYFP+D++GVV+D + RT GKGLRMIMVH      +W  +  +        GL + +    E+  GK   M DE+TAEFLWQ KLA
Sbjct:    5 INNHWWDHRQLYGTTAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHSTCNME-QPSNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAI---TKWGPLAKLCD------GLPIEEGWFKETDSGKK-EMEDEETAEFLWQTKLA 223

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig16486.3695.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig16486.3695.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LNM6_ECTSI	6.470e-104	64.01	DDE_3 domain-containing protein n=3 Tax=Ectocarpus...	[more]
A0A6H5KAU4_9PHAE	4.150e-102	61.94	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JMA8_9PHAE	7.480e-101	59.20	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KIM5_9PHAE	2.430e-94	63.94	DDE_3 domain-containing protein n=4 Tax=Ectocarpus...	[more]
A0A6H5KKL0_9PHAE	5.810e-94	63.53	DDE_3 domain-containing protein n=2 Tax=Ectocarpus...	[more]
A0A6H5JWS3_9PHAE	9.970e-89	64.49	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5KDX2_9PHAE	1.020e-88	57.37	Uncharacterized protein n=8 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KDX7_9PHAE	1.460e-88	65.04	DDE_3 domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5JR41_9PHAE	5.920e-85	65.04	DDE_3 domain-containing protein n=5 Tax=Ectocarpus...	[more]
A0A6H5JWX3_9PHAE	9.560e-82	64.35	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig16486	contig	H-paniculata_contig16486:1068..5859 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Properties


Property Name	Value
Hectar predicted targeting category	other localisation
Exons	2
Model size	4243
Cds size	789
Stop	0
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig16486.3695.1	prot_H-paniculata_contig16486.3695.1	Halopteris paniculata Hal_grac_a_UBK monoicous	polypeptide	H-paniculata_contig16486 1068..2407 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622929314.1513307-CDS-H-paniculata_contig16486:1067..1799	1622929314.1513307-CDS-H-paniculata_contig16486:1067..1799	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig16486 1068..1799 -
1691480811.4557729-CDS-H-paniculata_contig16486:1067..1799	1691480811.4557729-CDS-H-paniculata_contig16486:1067..1799	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig16486 1068..1799 -
1622929314.1626372-CDS-H-paniculata_contig16486:2350..2407	1622929314.1626372-CDS-H-paniculata_contig16486:2350..2407	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig16486 2351..2407 -
1691480811.4646757-CDS-H-paniculata_contig16486:2350..2407	1691480811.4646757-CDS-H-paniculata_contig16486:2350..2407	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig16486 2351..2407 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622929314.1750288-UTR-H-paniculata_contig16486:2407..5859	1622929314.1750288-UTR-H-paniculata_contig16486:2407..5859	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig16486 2408..5859 -
1691480811.4730635-UTR-H-paniculata_contig16486:2407..5859	1691480811.4730635-UTR-H-paniculata_contig16486:2407..5859	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig16486 2408..5859 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-paniculata_contig16486:1068..5859-
coding sequence from alignment at H-paniculata_contig16486:1068..5859-

protein sequence of mRNA_H-paniculata_contig16486.3695.1

>prot_H-paniculata_contig16486.3695.1 ID=prot_H-paniculata_contig16486.3695.1|Name=mRNA_H-paniculata_contig16486.3695.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=263bp
MLLFALRKDGVSENQPVLQVASTFKIGHSKVSGVNNHWWDHNTLLETTGE
GRGKVTKNDDGRRRITQDQEDQLYKFINDEHKAGRQVFRRTVEEWMMDHC
NPDKEVSNRAVGGLLQRLGYRCRRGRIKTPPLDAKRLARIRLFLVEMNIA
KRAEDAGLAVLVYMDESFVHQAHGSTYSYFPTDQNGVVEDEMDRTMGKGL
RMIMVHESRSGARWLRVVPIISFKSKRVGLSVRKTIGESKGGKDFNMIDE
KTAEFLWQAKLAK

mRNA from alignment at H-paniculata_contig16486:1068..5859-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-paniculata_contig16486.3695.1 ID=mRNA_H-paniculata_contig16486.3695.1|Name=mRNA_H-paniculata_contig16486.3695.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4792bp|location=Sequence derived from alignment at H-paniculata_contig16486:1068..5859- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGTGTTCTTTTGTTTCCTATTTTATCCTTTGTGCTCAACGCACTGGGCT
GTATAATCTACATTACTTCAAACTTATCATTGCTATACCATAGATTCAAC
AGCGGGGAGCTGTGTGAATCTATCTGTGGCCAGAGCTTATCAACAGACTG
GCCGTTCAGGGCGGCAGTTGGGTGCCTTCTCTGGCGAGCCACGATGACCC
GGCTGGACATAGCGAAAGCTGTACGAGATGTGGCGCGACACTCGCACAAC
CCTTGCGCGCGTCACTGGGCTGGGGTCCTGAAAATTCTGACTTATCTTAA
CAAGAACAGGTCTTTGGAACTAACCTTCTCGCGGAGCTCAAGGCTGGAAC
TGGACGTATATGCTGATGCTGGTTTCGCGGAAATTTCTTTGAATATACGT
TCTGTTTTGGGGTGGCTGTGATTTTAGGAGGCGTTGCGATCAGCTTTAGC
AGCGGTACGCAGCACTGTGTTACTGTTTCTACTACCAAAGCGGAGTATCT
GGCTCTTGGAGAGAGAGCTAAACAGGGCTTGTATGTGAAGGGTGTGCTTG
TATTCTTGCGACCGGAATTGTACGGTATTGGTATTAAGCTGTTCGAGAAT
AATGCTCGGGCACAATCTTTGGCTGAAAACCTGCGGAGCTCTAGTCGGAG
TAGACACATTGATGTAAGATACCATTTCATTCGTGATCTGGTGAAGACCG
GAAAGAGGTCAATACACCGTATCGATTCAAAAGACCAGCACGTTGATATC
CTTACCAAAGCTGTTCCTTTACATATTTTTAGGGATCACAGAAGAGTTTT
GATGAATTTGTCCAACTGAACTTTTGTGCCGAATTTTACGGATCATAATC
ATGTGAAGCAGTCGGAAACTGGTTCAGCTAGTATCTTACGCTATTAGTGG
GTATAGGTTTTGGATTGGCTGTCCAGGTTTGCCATTGTCTTGGTCCTTGT
TTGACGGGCGCTGAATATTAGAGGGTTTTCTGCCCGGTCGCCAGGTTTTT
CCCTCTGTGTTACGAATGTTGTTGTTGTGGATGGTACCCTTGGCTTTCCT
TGTCTTATTTTCATTGGATGCGGATAACAAGGGCGGGTGTTCGAGTGTGT
TGTCCTCCCACCTGGGATGAAGGACTGGGTGAGAGATCGACTGTTGTGAG
GCCATGCTAGGATGTTGATTGTGAGGTTTTTGGAACAGAATTGACAATTA
TATATAACTATGTTCCTGTTGGTCTGGTTCGGGTCTGTCTGTATTTTGGT
GCAGCCTAATTGTCGGCTACAGCAGCCCGTCTCCGGCTGGGAGGGTCGAG
CCCTCGTTTGTTTGAATCACATCTGTCCCCCTAAACGGGACCAGTAATAA
AGAGGTTGTATAAAATTCTCTTTGTTGGTTCCAGACATCGATAGGATTCA
GGAGCCTAGGAATTATCTAATCGGGGGTGGCTTCAATGCCCTCGACGATG
CCGAAGCTGAGAGATTGGAGTAGGAGCAAGCTTCAGGAGAAGATGCCGTG
GCCCGACGGTAATTACGCTAGGTGAGGGCGGATATGTGCGCGATGATGGA
GGCGAACGAAAAGGCGCGGAGAGAAAGGATTGAGGCGAGTGAGAATGCCC
AGAGAGAGACGCCTATCAGCTTTTAGATGATGCAGTCGGACGCGCGCACC
ATATACAACGATGTTGTAGAGGAGATATCCTCGTTATGTACCGGACAGTC
TGGCAACAAGCAGGGCGGTGTATACCGAATCGAAGAGGGAGGTGCGGCGA
GCGACCTCGGCCAATTTGGGCAGCCCACGGTACCATGGTTTCACCCGAGC
TCGTAAAAACCAGGGGCGCCGGCGACGCCGCCGGAAGTGAGTCAGAGCTG
TATGCTCTGCTGAATACTGTGATTGGTATTAGTAACAGCAGTAGTGAAAA
TACAGTATCATGCTTTGATGAATAAATGTAGCACAATTACGATGCGGAGA
AACAGAATAAGAATTTCGCCGCATGCCGTTACATTTCCAGAATTATGGAT
AGTCCTCACGATAACAACCAAGGAATGATCGGGACGTCCGCGTCTTTGCA
TATTTGGGAGATGTTATTCCATAGGTTCATAGATTGATGAAGGAGAGACC
TACCTTGCCCACTTCCATTATCCAACTGATTGAGCCAAGGTTCCTAGTCT
GTGAATTCAGTAGACGGGTCACTGCAGCAGTAGAGGTTATTACCAGAGAG
ATCAAGATGAGATTAAAATAGTAACAAAATAAAAGAAGATCTTGTTTCAG
CGAACGCCTAGACTCCAGGGAGGAGAGTCTAAGGAGGAAGCCGTGCCAGC
TTTCAACTGCAAATATCATCGAACAAAGTGCCCGACTACACGGCGCGGGC
AGTACCATCAGTTCTCGCCAGTTTATTCGCATCGGCGGATTCGCCACGCC
CAGGCGGTATGCGTCGAACAGACAACTGTAACATAAGCGCGCCGCCCGGG
GCATTCTACCCAAGCAATTCGGTGATAGGTGCCCAATCTAGTGCACGTCA
ACTATACGAGAAACCCACAAACAACGTAGTGCTAGTTGGGGGGAAACGGT
GGTGCAGAAGATTTGGATACTATTACAGAGTAACATAATACTCAGGAGCA
TTGTTTTTTGTCTTTCGGAAACTGAATATATATATATTGTTTCTCCGTTG
GTCTACAGATTTTCACTTCTAGCTGAAAACAAAAACACACTCTAAAACCA
TTTGCACAGGCATGCAGCAACCGATTGGTGCATATCGTAGGTTTAATGGA
AAGGGTGCAACTGTAACTTTCGAATGATCCTGGTCTTGTCCTTATCGGAT
GGTTGCAACTTGCGAGAGGCGGCGGTGATTATAGGCATTTTTTCTTGTGA
ATTATTGGACGGGCATTCTTTTCTCTAAACAAATTCCCACACACAGAAAG
CAACTAGAACGTTTTGGAAACCCCATGACTGGGCGCGTGCGCCCATCTCA
GTGGTTTGAGAAACACTCCAGCCGTTCTCGAGCAACACGCGCTTGAAGAG
GGGTTTCTCGGTAATACGAAAATGGGGAAGATGAAGGGCAGGCGCCAACC
CACCGGTGGCGCCACTGGCCGCCCGAGCAACGTGGCGAAAAGGGCCAAAA
ATGGTGCGGCGAGAGATGCTCAGGCTCTCGACAGACTCAGGGTTCAGCTT
CAGGAGCAGCAGGCAGCGCTAGCGGCGCTCAAGGCCGAAGTCGAGTCGAG
GGAGAAAGCTGTCAAGGCGAAAGAGGCAGCGATTGCCAAGAAGGAGGTAA
ACAAAGAGCGCGTCGCTGCGAAGCAGCACGCAAAACAGCATGCGCAGAAC
AGCGAGAGCAGGAGGTCGTCGAAGCGGCTGCTCACGCCGCACAGCAGCCG
AAGCTTTCACAGGCAGCCCACACCTTCATCGACGACTCTGTGCAAAAGCT
GAAGCCTCGAACTGGCGAGGTCTTGTGCAATGTCCAGTCGAAGCTGATTC
TCATGCTGTTGTTTGCTCTTCGCAAGGACGGCGTCTCTGAGAATCAACCG
GTGCTTCAGGTCACTACGAGTACAGTCAGCAAGTTTATTTATTACTGATA
TTACAAGTGCCTGTTTTGTATTGCTTAAAGTATGCTGTACAGCAGCAGGT
TTTGCGGCATGTTAATTCGAATCATATGTCTTTTCGCGCCCTTTTCGGTG
TTGCTGTTCATACACCTCTGAATGTACAATGTACTGCTGTCTGTACGAAC
ACGGTTGCACTGCTGTCTGATGTACTGTGCGCACCGCTGTTCGTACGGTT
CGCTCCCACTGCTGTCTCTACGGTGCACACTGCTGTCCACACAGTGCACA
CAGCTGCCTGTACGGTTGTGCACTGCTGTGTGTACCGTACAACAGTGAGT
TCGCTGTCTCCCAAATCCTCACCAATGTACCCACGACGATAACGCTGTTA
CGCATGGCGCCTCATGCGCATTTTCTTCCAAGGCTGTACGCTGTAACTTC
TGCTCTCTGTTTGCACGGCTTGAGGTGCGCTGTCTTGGCAATTGCACTGA
CCCGACTCCCGTATGCCGATGCAATATGCGCTGCGCTCTGGACAACTGAA
CGTCTGCCAGGTGGCGAGCACCTTCAAGATCGGCCATTCGAAAGTCAGCG
GCGTCAACAATCACTGGTGGGACCACAACACCCTGTTGGAAACCACCGGC
GAAGGAAGAGGCAAGGTCACCAAGAACGACGACGGCCGACGGCGTATCAC
CCAAGATCAGGAGGACCAGCTTTACAAGTTTATCAACGACGAGCACAAAG
CCGGGCGCCAAGTCTTTCGCCGTACGGTGGAGGAGTGGATGATGGACCAC
TGCAACCCAGACAAGGAGGTGTCAAACCGCGCGGTAGGAGGGTTGCTGCA
GAGGCTCGGTTATAGGTGCCGTAGGGGCAGGATCAAAACACCCCCGTTGG
ATGCCAAGAGGCTCGCGCGTATTCGTCTCTTTCTCGTTGAAATGAACATT
GCGAAAAGGGCAGAGGATGCGGGGCTGGCAGTTCTTGTGTACATGGATGA
GAGTTTTGTCCACCAGGCGCACGGTTCCACGTATTCCTATTTTCCTACTG
ACCAGAATGGGGTTGTAGAGGATGAGATGGATCGCACGATGGGGAAGGGC
TTACGCATGATTATGGTGCATGAATCAAGAAGTGGGGCCCGTTGGTTGCG
CGTGGTACCAATAATATCTTTCAAATCGAAGAGGGTTGGTTTAAGCGTGA
GGAAAACGATAGGGGAAAGCAAGGGGGGTAAGGACTTTAACATGATAGAT
GAGAAAACAGCAGAGTTTCTGTGGCAGGCCAAGTTGGCAAAG

Coding sequence (CDS) from alignment at H-paniculata_contig16486:1068..5859-

>mRNA_H-paniculata_contig16486.3695.1 ID=mRNA_H-paniculata_contig16486.3695.1|Name=mRNA_H-paniculata_contig16486.3695.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1578bp|location=Sequence derived from alignment at H-paniculata_contig16486:1068..5859- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCTGTTGTTTGCTCTTCGCAAGGACGGCGTCTCTGAGAATCAACCGGT
GCTTCAGATGCTGTTGTTTGCTCTTCGCAAGGACGGCGTCTCTGAGAATC
AACCGGTGCTTCAGGTGGCGAGCACCTTCAAGATCGGCCATTCGAAAGTC
AGCGGCGTCAACAATCACTGGTGGGACCACAACACCCTGTTGGAAACCAC
CGGCGAAGGAAGAGGCAAGGTCACCAAGAACGACGACGGCCGACGGCGTA
TCACCCAAGATCAGGAGGACCAGCTTTACAAGTTTATCAACGACGAGCAC
AAAGCCGGGCGCCAAGTCTTTCGCCGTACGGTGGAGGAGTGGATGATGGA
CCACTGCAACCCAGACAAGGAGGTGTCAAACCGCGCGGTAGGAGGGTTGC
TGCAGAGGCTCGGTTATAGGTGCCGTAGGGGCAGGATCAAAACACCCCCG
TTGGATGCCAAGAGGCTCGCGCGTATTCGTCTCTTTCTCGTTGAAATGAA
CATTGCGAAAAGGGCAGAGGATGCGGGGCTGGCAGTTCTTGTGTACATGG
ATGAGAGTTTTGTCCACCAGGCGCACGGTTCCACGTATTCCTATTTTCCT
ACTGACCAGAATGGGGTTGTAGAGGATGAGATGGATCGCACGATGGGGAA
GGGCTTACGCATGATTATGGTGCATGAATCAAGAAGTGGGGCCCGTTGGT
TGCGCGTGGTACCAATAATATCTTTCAAATCGAAGAGGGTTGGTTTAAGC
GTGAGGAAAACGATAGGGGAAAGCAAGGGGGGTAAGGACTTTAACATGAT
AGATGAGAAAACAGCAGAGTTTCTGTGGCAGGCCAAGTTGGCAAAGGTGG
CGAGCACCTTCAAGATCGGCCATTCGAAAGTCAGCGGCGTCAACAATCAC
TGGTGGGACCACAACACCCTGTTGGAAACCACCGGCGAAGGAAGAGGCAA
GGTCACCAAGAACGACGACGGCCGACGGCGTATCACCCAAGATCAGGAGG
ACCAGCTTTACAAGTTTATCAACGACGAGCACAAAGCCGGGCGCCAAGTC
TTTCGCCGTACGGTGGAGGAGTGGATGATGGACCACTGCAACCCAGACAA
GGAGGTGTCAAACCGCGCGGTAGGAGGGTTGCTGCAGAGGCTCGGTTATA
GGTGCCGTAGGGGCAGGATCAAAACACCCCCGTTGGATGCCAAGAGGCTC
GCGCGTATTCGTCTCTTTCTCGTTGAAATGAACATTGCGAAAAGGGCAGA
GGATGCGGGGCTGGCAGTTCTTGTGTACATGGATGAGAGTTTTGTCCACC
AGGCGCACGGTTCCACGTATTCCTATTTTCCTACTGACCAGAATGGGGTT
GTAGAGGATGAGATGGATCGCACGATGGGGAAGGGCTTACGCATGATTAT
GGTGCATGAATCAAGAAGTGGGGCCCGTTGGTTGCGCGTGGTACCAATAA
TATCTTTCAAATCGAAGAGGGTTGGTTTAAGCGTGAGGAAAACGATAGGG
GAAAGCAAGGGGGGTAAGGACTTTAACATGATAGATGAGAAAACAGCAGA
GTTTCTGTGGCAGGCCAAGTTGGCAAAG