mRNA_H-paniculata_contig1648.3692.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1648.3692.1 vs. uniprot
Match: A0A6H5JGC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGC1_9PHAE) HSP 1 Score: 235 bits (599), Expect = 6.520e-71 Identity = 147/312 (47.12%), Postives = 183/312 (58.65%), Query Frame = 1
Query: 97 ESLCLTRSSTIFHALLRIYGCPEHVPSSLVLHIVGADHREGNTSEQSQKMFEPLFLHLACRCENIRTLHMLFCGPNVAAPQHGAKHSF--QFTALNCSTDEVNSTNIFHGEQIGHSS-ADTKSSRTSMDKMDPSGAGDGAGQLAVTLQYISGLYHDVSFELDPGPDAMFLFNAGLWGYDDWTATLEYILLASRT-------GTRR----------PKWSQLTAVVVTSYCSEEAEDDMDTIEQLLCGGGGNSRSNPASLEVGAEDAAD-MGTVGWLWRPEINPHRSLLERRSACAVEGRRLFENHSWQAVRP 969
ESL LTRS TIFHAL+RI+GC ++PS LVLHI+GADHREG T +Q++ MF L L E++ L + CGPN+ HG +H+F D+ NI + + S A T RT+ P AG L V L Y SGLYHDVS L PDA+FLFNAGLWGYDDW TLEYIL R G R+ P+ + VVVTSYCSEEA DDM+T+E++L G+ +EV A+ +G + WLW+PE+NPHRS + RR+ C VEGR LFENHSWQA+RP
Sbjct: 26 ESLRLTRSFTIFHALMRIFGCG-NLPSHLVLHILGADHREGTTPQQTRAMFVDLLQRLG-HDEHVLDLDFVLCGPNIPPHLHGTRHTFVHHHAPAAAKMDQ----NICGLDGVWQESPAATPGMRTTRCCDSPPST---AGALTVRLWYNSGLYHDVS-GLFATPDAIFLFNAGLWGYDDWEPTLEYILGCDRAACPSDHVGNRQASPPPIPATNPRPRNVAPVVVTSYCSEEASDDMETLERVLLAEDGSF------VEVSPGVASSPVGGLEWLWKPEVNPHRSRVPRRTECGVEGRALFENHSWQALRP 321
BLAST of mRNA_H-paniculata_contig1648.3692.1 vs. uniprot
Match: D7FNZ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNZ1_ECTSI) HSP 1 Score: 175 bits (443), Expect = 1.280e-48 Identity = 111/259 (42.86%), Postives = 139/259 (53.67%), Query Frame = 1
Query: 244 MFEPLFLHLACRCENIRTLHMLFCGPNVAAPQHGAKHSFQFTALNCSTDEVNSTNIFHGEQIGHSSADTKSSRTSMDKMDPSGAGDGAGQLAVTLQYISGLYHDVSFELDPGPDAMFLFNAGLWGYDDWTATLEYILLASRT-------GTRRPKWSQLTA----------VVVTSYCSEEAEDDMDTIEQLLCGGGGNSRSNPASLEVGAEDAADMGTVGWLWRPEINPHRSLLERRSACAVEGRRLFENHSWQAVRP 969
MF LF L E+++ L +FCGPN+ HG +H+ + + + G +A T PS A G L V L Y SGLYHDVS L PDA+FLFNAGLWGYDDW TLE+IL R G R+ + A VVVTSYCSEEA DDM+T+E++L G GN L G ++ +G + WLW+PE+NPHRS + RR+ C VEGR LFENHSWQA+RP
Sbjct: 1 MFVDLFQRLG-HDEHVQDLDFVFCGPNIPPHLHGTRHTLVHHHAPAAATKDQTICGLDGVWQESPAATPGMMTTRCCDSPPSTA----GALTVRLWYNSGLYHDVS-GLFATPDALFLFNAGLWGYDDWEPTLEHILGCDRAACPSDHVGNRQASPPPIPATKSGPRNAVPVVVTSYCSEEASDDMETLERVLLGEDGNF----VELSPGVA-SSPVGGLEWLWKPEVNPHRSRVPRRTECGVEGRALFENHSWQALRP 248
BLAST of mRNA_H-paniculata_contig1648.3692.1 vs. uniprot
Match: K3WG78_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WG78_GLOUD) HSP 1 Score: 91.7 bits (226), Expect = 1.820e-17 Identity = 75/274 (27.37%), Postives = 106/274 (38.69%), Query Frame = 1
Query: 154 GCPEHVPSSLVLHIVGADHREGNTSEQSQKMFEPLFLHLACRCENIRTLHMLFCGPNVAAPQHGAKHSFQFTALNCSTDEVNSTNIFHGEQIGHSSADTKSSRTSMDKMDPSGAGDGAGQLAVTLQYISGLYHDVSFE--LDPGPDAMFLFNAGLWGYDDWTATLEYILLASRTGTRRPKWSQLTAVVVTSYCSEEAEDDMDTIEQLLCGGGGNSRSNPASLEVGAEDAADMGTVGWLWRPEINPHRSLLERRSACAVEGRRLFENHSWQAVRP 969
C S L +H+VGADHREGNT ++ +F+ F LA TL ++ GPN+A H + +S +T+ GE + +A+ T + + Y G + D + L PD FNAG+WGYD+W +L +L +T ++VTSY EA DD D ++ L W WR E NPH SL R + G L EN W + P
Sbjct: 46 ACSSSNDSVLTIHLVGADHREGNTGAETCVIFDTFFRALAEE-GRFATLQLVLVGPNIARLLHQSSYSRPWTSA------------LEGENMNIVAANAAEPST----------------CQIEISYFVGSFDDYFLDKALYLPPDLAVCFNAGIWGYDEWLPSLRLLLHTIKT-----------PLLVTSYNENEAMDDEDVLDTLA-------------------------PPQWFWRAEKNPHGSLRHRATNNNF-GSVLKENDYWMCLGP 253
BLAST of mRNA_H-paniculata_contig1648.3692.1 vs. uniprot
Match: A0A1Z5K1M8_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K1M8_FISSO) HSP 1 Score: 92.4 bits (228), Expect = 8.840e-17 Identity = 82/289 (28.37%), Postives = 116/289 (40.14%), Query Frame = 1
Query: 109 LTRSSTIFHALLRIYGCPEHVPSSLV---LHIVGADHREGNTSEQSQKMFEPLFLHLACRCENIRTLHMLFCGPNVAAPQHGAKHSFQFTALNCSTDEVNSTNIFHGEQIGHSSADTKSSRTSMDKMDPSGAGDGAGQLAVTLQYISGLYHDVSFELDPGPDAMFLFNAGLWGYDDWTATLEYILLASRTGTRRPKWSQLTAVVVTSYCSEEAEDDMDTIEQLLCGGGGNSRSNPASLEVGAEDAADMGTVGWLWRPEINPHRSLLERRSACAVEGRRLFENHSWQAVR 966
L+RS+TI AL+R+ V L +H++G D E T ++ + FEPL + + ++H+ F GP + G S L+ S H QI +S S LY D PD + FNAG+WGY DW AT+ I A RT VVT+Y +EA+DD D IE + +++ D+ + W PEINP S ++R + A GRR EN +WQA R
Sbjct: 232 LSRSATIAEALVRLNVIGAKVFEDLWCLNVHVIGCDEVECKTDDRIRYYFEPLVRWIGAQHRGPTSMHLSFVGPGIV----GRDGSAVVNILSGSNS--------HRLQIAQASCH------------------------------SALYEDWLPSQTDKPDIIIAFNAGIWGYSDWCATIRTI--AERTVQ--------VPFVVTAYTLQEADDDYDVIEGEI-----------TKALAWSKEKIDLCCI---WEPEINPFASKIDRPTQSAPAGRRYRENQAWQAWR 454
BLAST of mRNA_H-paniculata_contig1648.3692.1 vs. uniprot
Match: A0A485KGC5_9STRA (Aste57867_5070 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KGC5_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 5.440e-16 Identity = 79/291 (27.15%), Postives = 109/291 (37.46%), Query Frame = 1
Query: 133 HALLRIYGCPEHV--PSSLVLHIVGADHREGNTSEQSQKMFEPLF--LHLA---------CRCENIRTLHMLFCGPNVAAPQHGAKHSFQFTALNCSTDEVNSTNIFHGEQIGHSSADTKSSRTSMDKMDPSGAGDGAGQLAVTLQYISGLYHDVSFELDP---GPDAMFLFNAGLWGYDDWTATLEYILLASRTGTRRPKWSQLTAVVVTSYCSEEAEDDMDTIEQLLCGGGGNSRSNPASLEVGAEDAADMGTVGWLWRPEINPHRSLLERRSACAVEGRRLFENHSWQ 957
HAL R + P+ V P LVLHIVGAD REGN ++ + F+ L H A L ++ GPNVA HG + F + + S+ G +V L Y + L+ + + P P A+F FNAG+WGYD+W T ++++ ++VTSY EA DD D I+ + G W W+ E NP SL R S + R L EN WQ
Sbjct: 36 HALKRKHKLPDEVDPPVRLVLHIVGADFREGNDVAETLRAFDQLITAFHTAPPPTAKGKPTPDHGYDELVLVMIGPNVARKLHGVEERVVFPSSSSSS----------------------------------------GGKSVRLLYATELWEE--YLAGPRYLSPSAVFCFNAGVWGYDEWLPTFQHMMCEDAA----------LPILVTSYNEFEAVDDADAIDDM------------------------EGPWVWRWQQEPNPFASLTPRSSQNTIANRVLHENAYWQ 250
BLAST of mRNA_H-paniculata_contig1648.3692.1 vs. uniprot
Match: A0A067D2C9_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D2C9_SAPPC) HSP 1 Score: 87.4 bits (215), Expect = 5.830e-16 Identity = 85/309 (27.51%), Postives = 118/309 (38.19%), Query Frame = 1
Query: 85 ADPIE--SLCLTRSSTIFHAL--LRIYGCP-----EHVPSS-------LVLHIVGADHREGNTSEQSQKMFEPLFLHLACRCENIRTLHMLFCGPNVAAPQHGAKHSFQFTALNCSTDEVNSTNIFHGEQIGHSSADTKSSRTSMDKMDPSGAGDGAGQLAVTLQYISGLYHDVSFELDPGPDAMFLFNAGLWGYDDWTATLEYILLASRTGTRRPKWSQLTAVVVTSYCSEEAEDDMDTIEQLLCGGGGNSRSNPASLEVGAEDAADMGTVGWLWRPEINPHRSLLERRSACAVEGRRLFENHSWQAV 963
A PIE S +RS TI AL ++ P +H ++ LVLHIVGAD REG + + K+FE L L ++ GPNV HG + + S V ++ ++ G + Y+S P A+F FNAG+WGYDDW T ++ PK T +V+TSY + EA DD D ++ L +M V W WR E N L +R + + R L ENHSWQ +
Sbjct: 23 AAPIEERSYAHSRSMTILKALECAKLLSAPGVQHKKHKATTALSPKKKLVLHIVGADQREGTSVHATLKVFEVLLAAFGSADHGYDELVLVLIGPNVEQRLHGTAATSAIPGSDKSVCVVYASELWSEHLAGPT-------------------------------YVS-------------PSAIFCFNAGVWGYDDWLPTFALMM------AEEPK----TPIVITSYNALEAIDDADCLDDL-----------------------EMDFV-WRWRHEANAFLCLTQRATQHTLPDRVLNENHSWQCI 253
BLAST of mRNA_H-paniculata_contig1648.3692.1 vs. uniprot
Match: A0A1V9ZX77_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZX77_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 8.720e-16 Identity = 71/266 (26.69%), Postives = 107/266 (40.23%), Query Frame = 1
Query: 175 SSLVLHIVGADHREGNTSEQSQKMFEPL---FLHLACRCENIRTLHMLFCGPNVAAPQHGAKHSFQFTALNCSTDEVNSTNIFHGEQIGHSSADTKSSRTSMDKMDPSGAGDGAGQLAVTLQYISGLYHDVSFELDPGPDAMFLFNAGLWGYDDWTATLEYILLASRTGTRRPKWSQLTAVVVTSYCSEEAEDDMDTIEQLLCGGGGNSRSNPASLEVGAEDAADMGTVGWLWRPEINPHRSLLERRSACAVEGRRLFENHSWQAV 963
S LVLHIVGAD+REGN++ ++ ++FE L F H+ L ++ GPNV HG H+ S + +G +I S Y++G + V P A+F FNAG+WGYD+W + ++ + T +++TSY + EA DD D +E + ++ V W W+ E NP L +R S + R L EN WQ +
Sbjct: 92 SKLVLHIVGADYREGNSAAETLRVFEQLIAAFGHVEQLDHGYTELVLVLVGPNVEQRLHGTVHTSPIEGTG------KSVRLIYGSEIWSS-------------------------------YLAGQNYMV-------PSAIFCFNAGVWGYDEWIPAFQLMMQEAIH----------TPIIITSYNALEASDDADCLEDI-----------------------EIPFV-WRWKHEPNPFLCLKQRASQHTLADRVLKENSCWQCI 279
BLAST of mRNA_H-paniculata_contig1648.3692.1 vs. uniprot
Match: A0A1Z5JJV7_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JJV7_FISSO) HSP 1 Score: 89.0 bits (219), Expect = 1.300e-15 Identity = 81/300 (27.00%), Postives = 121/300 (40.33%), Query Frame = 1
Query: 109 LTRSSTIFHALLRIYGCPEHVPSS---LVLHIVGADHREGNTSEQSQKMFEPLFLHLACRCENIRTLHMLFCGPNVAAPQHGAKHSFQFTALNCSTDEVNSTNIFHGE-----QIGHSSADTKSSRTSMDKMDPSGAGDGAGQLAVTLQYISGLYHD-VSFELDPGPDAMFLFNAGLWGYDDWTATLEYILLASRTGTRRPKWSQLTAVVVTSYCSEEAEDDMDTIEQ-----LLCGGGGNSRSNPASLEVGAEDAADMGTVGWLWRPEINPHRSLLERRSACAVEGRRLFENHSWQAVR 966
L+RS+TI AL+R+ V L +H++G D E T ++ + F+PL + + ++H+ GP + A S N+ G QI H+S S LY + +S E D PD + FNAG+WGY DW AT+ ++A R VVT+Y +EA+DD D +E+ L C +++ D+ + W PEINP S ++R + A GRR EN +WQA R
Sbjct: 234 LSRSATIAEALVRLNVIGAKVFEDTWCLNVHVIGCDQVECETDDRIRTYFQPLVRWIGAQHRGPTSIHLSLVGPGIVERDGSA-----------------SVNLLSGSNSDRLQIAHASCH------------------------------SALYKEWLSSETDK-PDIIIAFNAGIWGYSDWCATIR--IIAER--------KLQVPFVVTAYTLQEADDDYDVLEEGIIKALAC----------------SKEKIDLCCI---WEPEINPFASKMDRPTQSAPAGRRYRENQAWQAWR 456
BLAST of mRNA_H-paniculata_contig1648.3692.1 vs. uniprot
Match: A0A2D4CEU9_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CEU9_PYTIN) HSP 1 Score: 84.7 bits (208), Expect = 4.060e-15 Identity = 60/201 (29.85%), Postives = 85/201 (42.29%), Query Frame = 1
Query: 175 SSLVLHIVGADHREGNTSEQSQKMFEPLFLHLACRCENIRTLHMLFCGPNVAAPQHGAKHSFQFTALNCSTDEVNSTNIFHGEQIGHSSADTKSSRTSMDKMDPSGAGDGAGQLAVTLQYISGLYHDVSFELDP--GPDAMFLFNAGLWGYDDWTATLEYILLASRTGTRRPKWSQLTAVVVTSYCSEEAEDDMDTIEQLL 771
+ L +H+VGADHREGN+ ++ +FE LF +LA L ++ GPN+AA H HS Q T T D +P + V L Y G + D E PD FNAG+WGYD W TL+ ++ +T ++VTSY + EA DD D ++ +
Sbjct: 42 AELTIHLVGADHREGNSMAETMLIFERLFQYLAVEDGRYTLLRLVLVGPNIAAKLH---HSSQTT-------------------------------THSDMREPLSVHQPLASIEVALSYYVGSFDDYYGETAQYVRPDLAVCFNAGIWGYDQWLPTLQLLVHTIQT-----------PLLVTSYNAHEASDDEDVLDDSV 197
BLAST of mRNA_H-paniculata_contig1648.3692.1 vs. uniprot
Match: A0A8K1FAU4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FAU4_PYTOL) HSP 1 Score: 82.0 bits (201), Expect = 4.370e-14 Identity = 59/203 (29.06%), Postives = 88/203 (43.35%), Query Frame = 1
Query: 169 VPSSLVLHIVGADHREGNTSEQSQKMFEPLFLHLACRCENIRTLHMLFCGPNVAAPQHGAKHSFQFTALNCSTDEVNSTNIFHGEQIGHSSADTKSSRTSMDKMDPSGAGDGAGQLAVTLQYISGLYHDVSFELDP--GPDAMFLFNAGLWGYDDWTATLEYILLASRTGTRRPKWSQLTAVVVTSYCSEEAEDDMDTIEQLL 771
V +L +H+VGADHREGNT ++ +F+ F +LA TL ++ GPN+A H H ST+I ++A ++ T A + + L Y G + D E D PD FNAG+WGYD W TL ++ +T +++TSY EA DD D ++ +
Sbjct: 50 VDGTLTIHLVGADHREGNTVAETLGIFDQFFQYLAVDDRCYETLQLVLVGPNIAHKLHNDSHE--------------STHI-------DTTATLEAKAT-------------AAAIQIELSYYVGSFDDYYGETDQYVRPDLAVCFNAGIWGYDQWLPTLRLLVHQIQT-----------PLLITSYNENEASDDEDVLDDSV 207 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1648.3692.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1648.3692.1 >prot_H-paniculata_contig1648.3692.1 ID=prot_H-paniculata_contig1648.3692.1|Name=mRNA_H-paniculata_contig1648.3692.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=313bp MAEGKRTTAPWAADPIESLCLTRSSTIFHALLRIYGCPEHVPSSLVLHIVback to top mRNA from alignment at H-paniculata_contig1648:19100..23676- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1648.3692.1 ID=mRNA_H-paniculata_contig1648.3692.1|Name=mRNA_H-paniculata_contig1648.3692.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4577bp|location=Sequence derived from alignment at H-paniculata_contig1648:19100..23676- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1648:19100..23676- >mRNA_H-paniculata_contig1648.3692.1 ID=mRNA_H-paniculata_contig1648.3692.1|Name=mRNA_H-paniculata_contig1648.3692.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1878bp|location=Sequence derived from alignment at H-paniculata_contig1648:19100..23676- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |