mRNA_H-paniculata_contig1645.3680.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1645.3680.1 vs. uniprot
Match: D7G3I7_ECTSI (Heat shock protein 40 like protein/ DnaJ domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3I7_ECTSI) HSP 1 Score: 641 bits (1654), Expect = 6.010e-212 Identity = 459/951 (48.26%), Postives = 542/951 (56.99%), Query Frame = 1
Query: 10 ELVLPTTLAEARSAIHGGGDGVREGVATILVGLHDYRENQQVGGVNVAQVLAAAMRRLTEDPYLTLGVDPESDNGSIKKAYRKLALKYHPDKNSATPKLFQAVQGAHDILIEPDKRAEYDIKRKRQQEALDRLRKHPKTEETSPSSSSXXXXTPT-ARGGDPTTNSNGTSKAPNTXXXXXXXXXXXXXSTASGAGGGHPGGRTXXXXXXXXGEGGTANRDEKVRQFNKRFYEEFKRESHRHNKAKTGKGAA-AAATGASTHQPPPRPKIRSTNRTDSTITLEWHCKELPATTAYELQWRQRGRAASDWVTSPTLVVGNSCRKKNLEACTCYEFRVRAASAWGWSSHCDPVMVVTLPSXXXXXXXXXXXXXXXXXXXXSTPRQKVSGFQSDGVGSTAAADKARAQVEEARRRRSQSQKGNRTGATSQFRSSSIAGDRTQENSAESAESPVSGQDMAKTNSGYWRRMSRAAEQDSERDASEEGKGKEKARRRTLQPQGTPSEGAWMCIVCKRQNEPSSKSCWVCYTARRASYQSVNLERIRTDTEE------------TPPGSARRGSLPSNASYASTPPSIGLMTPERYPASKSNSRNRYSYSAAVSEPNEGAGGISDKVPSIRVHRVSSEHVISGGPGDNNDGIHVRTAGMSPTTXXXXXXXXXXXXXXXXNRGGRSSAGQ---RDGAAVWEFTEGDLDSVGRGATDYGSDDNWSYAEGATGIDTKSDPGDIGPSTSWRRKSVGAAPPSSHGVSSRQRRGSTASGDSGRGGSSRGAGGGVVEAPKSYLNGRITKLHLVRAEPIEDAAVVGYLVATKEVEVLAEVGNWFKVRWHKQAKEEGNGVVEARGAPKERNGDANSQQSTAEEPPGVADGAAESGNASAVG---------------------GKDELAEDVPGAR-DRGLGWCLTRDSKHQYIVTMGDRHVVPDFQGR 2745
+L+ + L A+++I G DGVREGVA +L + +Y NQ GGVN +QVL AAMRRLTEDPYLTLGVDP +D G+IKKAYRKLAL+YHPDKN AT LFQAVQGAHDILIEP+KRAEYD+KRKRQQEAL+RLRKHPK +++ +P AR XXXXXXXXXXXXX XXX GE A+ DEKVRQFNKRFYEEF+RE+ + +K+K AAA G S HQPP RPK+RSTNRT+ST+TLEWHC LP+TTA+ELQWRQRGR AS+WVTSPTLVVG SCRKKNL CTCYEFRVRAASAWGWS +CDPVMVVTLPS XXXXXXXXX S PRQKVSGFQSDG+G +AA +KA+AQVEEAR RRSQ+Q G+ + QFRSSSIAG RRRT+ QGTPSEGAW+C+VCKR NEP+S SCWVCYT R SYQ VNL+RIRT+ E P GS RR S+ S ST P+ G + A K S + +AA ++ +S+KVPSIRV+ V ++ P DGI V + +P++ G ++AG+ +D A VWEFTEGDLD+VG GAT YGSDD WSYA G G+DTKSDPGD +RR PK YLNGRITKLH VRAEPI +A VVGYL+ATKEVEVLAEVG+W+KVRWHK+AKE+ ++PP G+ E +D R ++G GWC+TRD KHQYIVT+G PD R
Sbjct: 5 QLLAASKLDAAQASIQSGEDGVREGVAMLLTAISEYECNQDSGGVNGSQVLGAAMRRLTEDPYLTLGVDPAADEGTIKKAYRKLALRYHPDKNKATSTLFQAVQGAHDILIEPNKRAEYDVKRKRQQEALNRLRKHPKGSAAGTPANNAGAASPGGARQPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTSARGEPAAASGDEKVRQFNKRFYEEFRREAQKQDKSKAXXXXXXAAAAGTSKHQPPSRPKMRSTNRTESTVTLEWHCAGLPSTTAFELQWRQRGRTASEWVTSPTLVVGKSCRKKNLAPCTCYEFRVRAASAWGWSGYCDPVMVVTLPSTGGGGAXXXXXXXXXESASTSPPRQKVSGFQSDGIGGSAA-EKAKAQVEEARHRRSQTQAGHAKPSV-QFRSSSIAGTEDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRRTMHAQGTPSEGAWVCVVCKRPNEPTSNSCWVCYTTR--SYQPVNLDRIRTENETPGRREGSVGGGGNPLGSGRRASIGSRPRSPSTTPTEGNTGKQSPTAGKGGSNTTNNGAAAT---DDSGVRVSEKVPSIRVYSVPTQ------PEPAGDGIRVSASDANPSS----------------GAAGNAAAGEEGTKDPADVWEFTEGDLDNVGGGATTYGSDDEWSYASGTGGLDTKSDPGDA---DRYRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------XXATPKRYLNGRITKLHNVRAEPIREAKVVGYLIATKEVEVLAEVGDWYKVRWHKRAKEKAR-----------------------QDPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEAEKPDDASEERKEKGTGWCVTRDKKHQYIVTVGAEETDPDATRR 893
BLAST of mRNA_H-paniculata_contig1645.3680.1 vs. uniprot
Match: A0A7S4EDW7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EDW7_9STRA) HSP 1 Score: 139 bits (351), Expect = 1.740e-30 Identity = 118/337 (35.01%), Postives = 158/337 (46.88%), Query Frame = 1
Query: 142 VNVAQVLAAAMRRLTEDPYLTLGVDPESDNGSIKKAYRKLALKYHPDKNS-ATPKLFQAVQGAHDILIEPDKRAEYDIKRKRQQEALDRLRKHPKTEETSPSSSSXXXXTPTARGGDPTTNSNGTSKAPNTXXXXXXXXXXXXXSTASGAGGGHPGGRTXXXXXXXXGEGGTANRDEKVRQFNKRFYEEFKRESHRHNKAKTGKGA------------------AAAATGASTHQ-----PPPRPK-IRSTNRTDSTITLEWHCKEL---PATTAYELQWRQRGRAASDWVTSPTLVVGNSCRKKNLEACTCYEFRVRAASAWGWSSHCDPVMVVTL 1068
VN A VL +++L EDPY LGV D+ +KKAYRKLAL+YHPDKN+ T LF +Q A+ +L + KR YD++R R++ ++LRK XXXX R G P S G + P+T ++ R FN++FY E+K+ H TG G A + GAST + P+P +R N+TDST+TLEW EL + AYELQWR+R W ++ L++ +CRK+NL+ T YEFRVRAAS GWS H D V TL
Sbjct: 48 VNGAPVLNRILKKLQEDPYRCLGVAKTCDSSEVKKAYRKLALQYHPDKNADRTTALFTEIQRAYTLLSDDKKRKSYDLRRARKEAQNEKLRKR------------XXXXXXXXREGSP---SMGMRRPPSTNSFHMPPQ---------------------------------TEEEKTQRDFNRKFYSEYKQ--HMKPAPSTGAGTSRPPPPSGAPPSEGVSAHARGSAGASTSKNGAXXXXPKPTHLRVANKTDSTVTLEWRAGELRGAAVSKAYELQWRKRQGKDQGWQSASQLILHTTCRKRNLDKQTRYEFRVRAASVAGWSPHSDVCDVTTL 334
BLAST of mRNA_H-paniculata_contig1645.3680.1 vs. uniprot
Match: A0A7S1TP40_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TP40_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 3.900e-17 Identity = 64/151 (42.38%), Postives = 90/151 (59.60%), Query Frame = 1
Query: 664 DEKVRQFNKRFYEEFKR--ESHRHNKAKTGKGAAAAA-------------------------TGASTHQP--PPRPK-IRSTNRTDSTITLEW--HCKELPATTAYELQWRQRGRAASDWVTSPTLVVGNSCRKKNLEACTCYEFRVRAAS 1020
DE+ R FNKRFY+EF++ ++ AK +GA + +G+S QP P RP+ +RST R+D+++TLEW H + + + AYELQWR+RGR+ +W T+P L++G +CRKKNLEA YEFRVRAAS
Sbjct: 73 DERFRAFNKRFYKEFRKAAKAAAAGNAKASEGAPGGSRQDYARRQEDDARKAANAYRAKDSNSGSSEGQPQVPERPRALRSTERSDTSVTLEWRSHTQGM-GSVAYELQWRKRGRSIHEWKTAPQLILGCTCRKKNLEAGAVYEFRVRAAS 222
BLAST of mRNA_H-paniculata_contig1645.3680.1 vs. uniprot
Match: A0A7S4DIU6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DIU6_HETAK) HSP 1 Score: 82.4 bits (202), Expect = 3.610e-14 Identity = 39/67 (58.21%), Postives = 52/67 (77.61%), Query Frame = 1
Query: 205 LGVDPESDNGSIKKAYRKLALKYHPDKNSATPKLFQAVQGAHDILIEPDKRAEYDIKRKRQQEALDR 405
L + ++DN SIKKAYRKLALKYHPDKN +TP LFQ VQGA+D+L + DK+ YD +++ QQ+ + R
Sbjct: 1 LNLTNDADNASIKKAYRKLALKYHPDKNPSTPLLFQEVQGAYDLLSDEDKKERYDERKRAQQQVMGR 67
BLAST of mRNA_H-paniculata_contig1645.3680.1 vs. uniprot
Match: A0A2I0IU97_PUNGR (J domain-containing protein n=2 Tax=malvids TaxID=91836 RepID=A0A2I0IU97_PUNGR) HSP 1 Score: 71.2 bits (173), Expect = 2.060e-11 Identity = 36/70 (51.43%), Postives = 48/70 (68.57%), Query Frame = 1
Query: 169 AMRRLTEDPYLTLGVDPESDNGSIKKAYRKLALKYHPDKNSATPK---LFQAVQGAHDILIEPDKRAEYD 369
A ++L DPY LGV S + IK AYRK+ALKYHPDKN+ PK +F+ V +++IL +PDKR +YD
Sbjct: 13 AAQQLRRDPYEVLGVSRNSTDQEIKSAYRKMALKYHPDKNANDPKAADMFKEVTFSYNILSDPDKRRQYD 82
BLAST of mRNA_H-paniculata_contig1645.3680.1 vs. uniprot
Match: A0A7V9WKE0_9ACTN (J domain-containing protein (Fragment) n=1 Tax=Thermoleophilaceae bacterium TaxID=2732252 RepID=A0A7V9WKE0_9ACTN) HSP 1 Score: 70.9 bits (172), Expect = 9.640e-11 Identity = 35/66 (53.03%), Postives = 48/66 (72.73%), Query Frame = 1
Query: 181 LTEDPYLTLGVDPESDNGSIKKAYRKLALKYHPDKN---SATPKLFQAVQGAHDILIEPDKRAEYD 369
+T++PY LGVD ++ + IKKAYRKLA +YHPDKN ++ + F+A+Q AH IL +P KR EYD
Sbjct: 3 VTKNPYDALGVDKKASDEEIKKAYRKLARQYHPDKNPGDASAEERFKAIQEAHSILSDPKKRREYD 68
BLAST of mRNA_H-paniculata_contig1645.3680.1 vs. uniprot
Match: A0A835YK20_9STRA (DnaJ domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK20_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 1.090e-10 Identity = 31/47 (65.96%), Postives = 37/47 (78.72%), Query Frame = 1
Query: 190 DPYLTLGVDPESDNGSIKKAYRKLALKYHPDKNSATPKLFQAVQGAH 330
DPYL+LGV ++ + IKKAYRKLALKYHPDKN T LFQA+Q A+
Sbjct: 1 DPYLSLGVPVDAPDNDIKKAYRKLALKYHPDKNRGTASLFQAIQAAN 47
BLAST of mRNA_H-paniculata_contig1645.3680.1 vs. uniprot
Match: A0A4P9ZN18_9FUNG (DnaJ domain-containing protein (Fragment) n=1 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4P9ZN18_9FUNG) HSP 1 Score: 67.4 bits (163), Expect = 2.150e-10 Identity = 30/58 (51.72%), Postives = 41/58 (70.69%), Query Frame = 1
Query: 196 YLTLGVDPESDNGSIKKAYRKLALKYHPDKNSATPKLFQAVQGAHDILIEPDKRAEYD 369
Y TL VDP++ IK+AYR+LAL+YHPDKN +F+A+ A+D+L +P KR YD
Sbjct: 2 YQTLNVDPDASPEEIKRAYRRLALRYHPDKNPEAEDMFRAITAAYDVLSDPYKRQVYD 59
BLAST of mRNA_H-paniculata_contig1645.3680.1 vs. uniprot
Match: A0A7S1G6Z7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G6Z7_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 2.560e-10 Identity = 35/79 (44.30%), Postives = 47/79 (59.49%), Query Frame = 1
Query: 133 VGGVNVAQVLAAAMRRLTEDPYLTLGVDPESDNGSIKKAYRKLALKYHPDKNSATPKLFQAVQGAHDILIEPDKRAEYD 369
+ +VA L A+ L DPY LGVD + +KKAYR+LAL+YHPDKN T LF+ V A+ ++ +P KR D
Sbjct: 56 ITAADVAPDLERALTALASDPYACLGVDSAATPNVVKKAYRRLALRYHPDKNHHTESLFKTVSAAYALVSDPVKRRALD 134
BLAST of mRNA_H-paniculata_contig1645.3680.1 vs. uniprot
Match: A0A438JUY7_VITVI (Chaperone protein dnaJ 15 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JUY7_VITVI) HSP 1 Score: 67.8 bits (164), Expect = 3.310e-10 Identity = 37/72 (51.39%), Postives = 50/72 (69.44%), Query Frame = 1
Query: 163 AAAMRRLTEDPYLTLGVDPESDNGSIKKAYRKLALKYHPDKNSATPK---LFQAVQGAHDILIEPDKRAEYD 369
A A+RR DPY L V +S + IK AYRKLALKYHPDKN++ P+ LF+ V +++IL +P+KR +YD
Sbjct: 10 APAVRR---DPYEVLSVSRDSTDQEIKTAYRKLALKYHPDKNASNPEASELFKEVAYSYNILSDPEKRRQYD 78 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1645.3680.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1645.3680.1 >prot_H-paniculata_contig1645.3680.1 ID=prot_H-paniculata_contig1645.3680.1|Name=mRNA_H-paniculata_contig1645.3680.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=928bp MVAELVLPTTLAEARSAIHGGGDGVREGVATILVGLHDYRENQQVGGVNVback to top mRNA from alignment at H-paniculata_contig1645:774..20471- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1645.3680.1 ID=mRNA_H-paniculata_contig1645.3680.1|Name=mRNA_H-paniculata_contig1645.3680.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=19698bp|location=Sequence derived from alignment at H-paniculata_contig1645:774..20471- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1645:774..20471- >mRNA_H-paniculata_contig1645.3680.1 ID=mRNA_H-paniculata_contig1645.3680.1|Name=mRNA_H-paniculata_contig1645.3680.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=5568bp|location=Sequence derived from alignment at H-paniculata_contig1645:774..20471- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |