mRNA_H-paniculata_contig1643.3670.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig1643.3670.1 vs. uniprot
Match: D7FTC4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTC4_ECTSI) HSP 1 Score: 695 bits (1794), Expect = 4.130e-246 Identity = 379/446 (84.98%), Postives = 404/446 (90.58%), Query Frame = 1
Query: 76 VGVAGLMKPMDLGQHVLTIVLELAHDDEQEELRMTAAALLNDLAESLGNDLCKQFVTPEMVSLSEDPNFRVRKATALNLHKICKVVGEAGIQRLLPAYXXXXXXXXXXXXXXXXXXXVEMSKAVGPEVSLRELQPVFVRLASEDASKLVRTGALQHLGRLISTLPGECVTENLVQYFTATAIESMGDPVADAELRLYCAFSFPAVVLTIGPARWGELRDSFGVLLRDPSWSVRKTLSHSLHEVAKVLTASDVEEDLVPAMEAFLRDMEDVRLGVIRHLADFFEQMSPDRREKHLNVLVEILQTTSPFNWRLREILAQQLPHLAPLLSLDSVFFAVVPVAFGLLNDPVAVVRERTFEVVAPLLQLAGAHSGARQASMVSRVRELAHAHTYQARQMYVYICHSMAIVGSPQ-DRRLYVQEFVPSLAELARDGVVNVRIAMSRTLSKSP 1410
VGVA LMKP+DLG HVLTIVL+LAHDDEQEELRMTAAALLNDLA++LG DLCKQFVTPEM SLSEDP FRVRKATALNL KICKVVGEAGI RLLPAY XXXXXXXXXXX VEMSKAVG EVSLREL PVF+ LAS D+SKLVRTGALQHLGRLISTLPGE V+E+LV+YFT TA+ESMGDPVADAELRLYCAFSFPAVV+TIGP RW ELR+SF L+RDPSWSVRKTLS SLHE+AKVL A DVE DLVPAMEAFLRDMEDVRLGVIRHLADFF++M+P +REKHLNVLVEILQTTSPFNWRLRE+LAQQLP LAPLL+ DSVFFAVVPVAFGLLNDPVAVVRE+TFEVVAPLLQLAGAHSGARQASMVSRVRELAHAHTYQARQMYVYICHSMA + +R L++QEFVPSLAELA D VVNVRIAMSRTLSK P
Sbjct: 129 VGVANLMKPIDLGHHVLTIVLQLAHDDEQEELRMTAAALLNDLADALGYDLCKQFVTPEMESLSEDPVFRVRKATALNLDKICKVVGEAGIARLLPAYLRLTXXXXXXXXXXXTEAMVEMSKAVGSEVSLRELTPVFLSLAS-DSSKLVRTGALQHLGRLISTLPGESVSEDLVRYFTGTAVESMGDPVADAELRLYCAFSFPAVVVTIGPDRWHELRESFAALIRDPSWSVRKTLSFSLHEIAKVLKADDVEGDLVPAMEAFLRDMEDVRLGVIRHLADFFQEMTPQQREKHLNVLVEILQTTSPFNWRLREVLAQQLPRLAPLLTPDSVFFAVVPVAFGLLNDPVAVVREKTFEVVAPLLQLAGAHSGARQASMVSRVRELAHAHTYQARQMYVYICHSMACSANVNHERPLFIQEFVPSLAELAMDSVVNVRIAMSRTLSKCP 573
BLAST of mRNA_H-paniculata_contig1643.3670.1 vs. uniprot
Match: A0A7S1CBG0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CBG0_9STRA) HSP 1 Score: 322 bits (825), Expect = 1.950e-98 Identity = 220/476 (46.22%), Postives = 279/476 (58.61%), Query Frame = 1
Query: 4 VLPTLTKLLGDNQAEVRQAAGESLVGVAGLMKPMDLGQHVLTIVLELAHDDEQEELRMTAAALLNDLAESLGNDLCKQFVTPEMVSLSEDPNFRVRKATALNLHKICKVVGEAGIQRLLPAYXXXXXXXXXXXXXXXXXXXVEMSKAVGPEVSLRELQPVFVRLASEDASKLVRTGALQHLGRLISTLPGECVTENLVQYFTATAIESM-----------GDPVADAELRLYCAFSFPAVVLTIGPARWGELRDSFGVLLRDPSWSVRKTLSHSLHEVAKVLTASDVEEDLVPAMEAFLRDMEDVRLGVIRHLADFFEQMSPDRREKHLNVLVEILQTTSPFNWRLREILAQQLPHLAPLLSLDSVFFAVVPVAFGLLNDPVAVVRERTFEVVAPLLQLAGAHSGARQASMVSRVRELAHAHTYQARQMYVYICHSMAIVGSPQDRRLYVQEFVPSLAELARDGVVNVRIAMSRTL 1398
+LP L KL+ D Q EVR AAGESLV +A +K DLG VLTI+L LAHDDEQE+LRMTAA LLN+LAE LG +L QFVTPE++ LSED FRVRKATALN XXXXXXXXXXXXXXXXXXX T A QHLG +ST+PGE +++ L+ +FT A GDP D +L LYCAFSFPAV LT+GP RW ELR F L RD VR+TLSHSLHEVA++L E++L+ E FLRD+++V++GVIRH+A+F + + P RE +L VL EI TSP NWR R +LA+QL L L S + F V P+A LL DPV VR+ T + + PL+ G A Q V R+ + A+A Y+ R +V +C +A SP+ + + F+P+L D V NVR++++R L
Sbjct: 103 LLPQLKKLVADPQPEVRLAAGESLVSIASHVKQDDLGPRVLTIMLGLAHDDEQEDLRMTAAVLLNELAEKLGQELVVQFVTPEVICLSEDHVFRVRKATALNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAYQHLGPFLSTIPGESISKELLVHFTGMAYAGTNGGGTTGNVGGGDP-GDGDLSLYCAFSFPAVALTLGPDRWPELRALFLALSRDVQRKVRRTLSHSLHEVARILGPKLAEKELLSTFEFFLRDLDEVKVGVIRHVAEFLDALEPATRESYLPVLQEIQNCTSPLNWRFRFLLAEQLTRLTQLFSSAATFSVVAPLATSLLQDPVGNVRDVTCKAIGPLVARLGEADKAWQDDYVLRLFKFANAPGYRDRLTFVKLCKYVARSTSPE---FFAKAFLPTLLLRVVDSVSNVRLSVARFL 574
BLAST of mRNA_H-paniculata_contig1643.3670.1 vs. uniprot
Match: A0A6H5JAD4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAD4_9PHAE) HSP 1 Score: 301 bits (770), Expect = 1.270e-90 Identity = 163/195 (83.59%), Postives = 174/195 (89.23%), Query Frame = 1
Query: 853 MEAFLRDMEDVRLGVIRHLADFFEQMSPDRREKHLNVLVEILQTTSPFNWRLREILAQQLPHLAPLLSLDSVFFAVVPVAFGLLNDPVAVVRERTFEVVAPLLQLAGAHSGARQASMVSRVRELAHAHTYQARQMYVYICHSMAIVGSPQ-DRRLYVQEFVPSLAELARDGVVNVRIAMSRTLSKSPGEVMIYSD 1434
MEAFLRDMEDVRLGVIRHLADFF++M P +REKHL+VL ILQTTSPFNWRLRE+LAQQLP LAPLL+ DSVFFAVVPVAFGLLNDPVAVVRE+TFEVVAPLLQLAGAHSGARQASMVSRVRELAHAHTYQARQMYVYICHSMA + +R L++QEFVPSLAELA D VVNVRIAMSRTLSK P VM D
Sbjct: 1 MEAFLRDMEDVRLGVIRHLADFFQEMIPLQREKHLHVL--ILQTTSPFNWRLREVLAQQLPRLAPLLTPDSVFFAVVPVAFGLLNDPVAVVREKTFEVVAPLLQLAGAHSGARQASMVSRVRELAHAHTYQARQMYVYICHSMACSANVNHERPLFIQEFVPSLAELATDSVVNVRIAMSRTLSKCPDWVMELPD 193
BLAST of mRNA_H-paniculata_contig1643.3670.1 vs. uniprot
Match: A0A5A8CWR3_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CWR3_CAFRO) HSP 1 Score: 288 bits (737), Expect = 5.140e-85 Identity = 211/470 (44.89%), Postives = 274/470 (58.30%), Query Frame = 1
Query: 4 VLPTLTKLLGDNQAEVRQAAGESLVGVAGLMKPMDLGQHVLTIVLELAHDDEQEELRMTAAALLNDLAESLGNDLCKQFVTPEMVSLSEDPNFRVRKATALNLHKICKVVGEA-GIQRLLPAYXXXXXXXXXXXXXXXXXXXVEMSKAVGPEVSLRE---LQPVFVRLASEDASKLVRTGALQHLGRLISTLPGECVTENLVQYFTATAIE--------SMGDPVADAELRLYCAFSFPAVVLTIGPARWGELRDSFGVLLRDPSWSVRKTLSHSLHEVAKVLTASDVEEDLVPAMEAFLRDMEDVRLGVIRHLADFFEQMSPDRREKHLNVLVEILQTTSPFNWRLREILAQQLPHLAPLLSLDSVFFAVVPVAFGLLNDPVAVVRERTFEVVAPLLQLAGAHSGARQASMVSRVRELAHAHTYQARQMYVYICHSMAIVGSPQDRRLYVQEFVPSLAELARDGVVNVR 1377
VL +L +L+ D Q EVR AAGESLV VA ++KP DLG +LTIV+ LAH+DE E++RMTAA LLN+LA SLG +LC+QFV E+ L+ DP FRVRKATALN+ +C+VVG A RLLP++XXXXXXXXXXXXXXXXXXX L F+R DAS+ VR A QHLG ++TLP +T ++ F A A P DAEL ++CAFSFPAV T+G ARW ELR F VL R P VR+ +S++LH++A+V+ DL P + F RD++DVR GVIR +A F + P RE + VL E L + WRLR +LA+Q+ LA + S VF V PVA LL D VA VR +APLL+ GA S + + + + A + R ++A P+D ++ F+ +L L RD V VR
Sbjct: 114 VLRSLARLVVDIQPEVRIAAGESLVTVAAMLKPADLGARLLTIVVHLAHNDEAEDMRMTAAVLLNELAVSLGPELCEQFVCSELEHLARDPVFRVRKATALNIDAVCRVVGPAVAAARLLPSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMQSFLR----DASRWVRNSAYQHLGPFLATLPPAAITPAVLAPFIAMAPRVDPPRGTMPASTPPPDAELSIFCAFSFPAVAFTLGGARWDELRPLFLVLARHPEKKVRRPISYALHDIARVVGPDLTFRDLFPVFDLFCRDVDDVRRGVIRGMAPFLASLHPADREACVPVLRETLDSVPARGWRLRRLLARQMHSLARIFSPMMVFAQVRPVAESLLKDEVAAVRNAVAVRLAPLLETVGAASLVLREDIEASLLSGATSGNASTRLTLARALEALAAELPPED---FLGSFLATLKRLGRDPVPGVR 576
BLAST of mRNA_H-paniculata_contig1643.3670.1 vs. uniprot
Match: A0A6H5JCV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCV5_9PHAE) HSP 1 Score: 273 bits (697), Expect = 3.580e-84 Identity = 161/189 (85.19%), Postives = 171/189 (90.48%), Query Frame = 1
Query: 76 VGVAGLMKPMDLGQHVLTIVLELAHDDEQEELRMTAAALLNDLAESLGNDLCKQFVTPEMVSLSEDPNFRVRKATALNLHKICKVVGEAGIQRLLPAYXXXXXXXXXXXXXXXXXXXVEMSKAVGPEVSLRELQPVFVRLASEDASKLVRTGALQHLGRLISTLPGECVTENLVQYFTATAIESMGDPV 642
VGVA LMKP+DLG HVLTIVL+LAHDDEQEELRMTAAALLNDLA++LG DLCKQFVTPEM SLSEDP FRVRKATALNL KICKVVGEAGI RLLPAY XXXXXXXXXXXXXX VEMSKAVG EVSLREL PVF+ LAS D+SKLVRTGALQHLGRLISTLPGE V+E+LV+YFT TA+ESMGDPV
Sbjct: 129 VGVANLMKPIDLGHHVLTIVLQLAHDDEQEELRMTAAALLNDLADALGYDLCKQFVTPEMESLSEDPVFRVRKATALNLDKICKVVGEAGIARLLPAYVRLXXXXXXXXXXXXXXAMVEMSKAVGSEVSLRELTPVFLNLAS-DSSKLVRTGALQHLGRLISTLPGESVSEDLVRYFTGTAVESMGDPV 316
BLAST of mRNA_H-paniculata_contig1643.3670.1 vs. uniprot
Match: A0A5A8DGB8_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DGB8_CAFRO) HSP 1 Score: 288 bits (738), Expect = 6.200e-83 Identity = 211/470 (44.89%), Postives = 274/470 (58.30%), Query Frame = 1
Query: 4 VLPTLTKLLGDNQAEVRQAAGESLVGVAGLMKPMDLGQHVLTIVLELAHDDEQEELRMTAAALLNDLAESLGNDLCKQFVTPEMVSLSEDPNFRVRKATALNLHKICKVVGEA-GIQRLLPAYXXXXXXXXXXXXXXXXXXXVEMSKAVGPEVSLRE---LQPVFVRLASEDASKLVRTGALQHLGRLISTLPGECVTENLVQYFTATAIE--------SMGDPVADAELRLYCAFSFPAVVLTIGPARWGELRDSFGVLLRDPSWSVRKTLSHSLHEVAKVLTASDVEEDLVPAMEAFLRDMEDVRLGVIRHLADFFEQMSPDRREKHLNVLVEILQTTSPFNWRLREILAQQLPHLAPLLSLDSVFFAVVPVAFGLLNDPVAVVRERTFEVVAPLLQLAGAHSGARQASMVSRVRELAHAHTYQARQMYVYICHSMAIVGSPQDRRLYVQEFVPSLAELARDGVVNVR 1377
VL +L +L+ D Q EVR AAGESLV VA ++KP DLG +LTIV+ LAH+DE E++RMTAA LLN+LA SLG +LC+QFV E+ L+ DP FRVRKATALN+ +C+VVG A RLLP++XXXXXXXXXXXXXXXXXXX L F+R DAS+ VR A QHLG ++TLP +T ++ F A A P DAEL ++CAFSFPAV T+G ARW ELR F VL R P VR+ +S++LH++A+V+ DL P + F RD++DVR GVIR +A F + P RE + VL E L + WRLR +LA+Q+ LA + S VF V PVA LL D VA VR +APLL+ GA S + + + + A + R ++A P+D ++ F+ +L L RD V VR
Sbjct: 92 VLRSLARLVVDIQPEVRIAAGESLVTVAAMLKPADLGARLLTIVVHLAHNDEAEDMRMTAAVLLNELAVSLGPELCEQFVCSELEHLARDPVFRVRKATALNIDAVCRVVGPAVAAARLLPSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMQSFLR----DASRWVRNSAYQHLGPFLATLPPAAITPAVLAPFIAMAPRVDPPRGTMPASTPPPDAELSIFCAFSFPAVAFTLGGARWDELRSLFLVLARHPEKKVRRPISYALHDIARVVGPDLTFRDLFPVFDLFCRDVDDVRRGVIRGMAPFLASLHPADREACVPVLRETLDSVPARGWRLRRLLARQMHSLARIFSPMMVFAQVRPVAESLLKDEVAAVRNAVAVRLAPLLETVGAASLVLREDIEASLLSGATSGNASTRLTLARALEALAAELPPED---FLGSFLATLKRLGRDPVPGVR 554
BLAST of mRNA_H-paniculata_contig1643.3670.1 vs. uniprot
Match: A0A812TWQ6_9DINO (PPP4R1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812TWQ6_9DINO) HSP 1 Score: 280 bits (715), Expect = 9.340e-83 Identity = 198/472 (41.95%), Postives = 263/472 (55.72%), Query Frame = 1
Query: 4 VLPTLTKLLGDNQAEVRQAAGESLVGVAGLMKPMDLGQHVLTIVLELAHDDEQEELRMTAAALLNDLAESLGNDLCKQFVTPEMVSLSEDPNFRVRKATALNLHKICKVVGEAGIQRLLPAYXXXXXXXXXXXXXXXXXXXVEMSKAVGPEVSLRELQPVFVRLASEDASKLVRTGALQHLGRLISTLPGECVTENLVQYFTATAIES-MGDPVADAELRLYCAFSFPAVVLTIGPARWGELRDSFGVLLRDPSWSVRKTLSHSLHEVAKVLTASDVEEDLVPAMEAFLRDMEDVRLGVIRHLADFFEQMSPDRREKHLNVLVEILQTTSPFNWRLREILAQQLPHLAPLLSLDSVFFAVVPVAFGLLNDPVAVVRERTFEVVAPLLQLAGAHSGARQASMVSRVRELAHAHTYQARQMYVYICHSMAIVGSPQDRRLYVQEFVPSLAELARDGVVNVRIAMSRTLSKSPGE 1416
VLP L L+ D Q EVR AAGE+LVGVA ++ DLG VLTIVL LAHDDEQE+LRMTAA LLN+LAE LG DLC QFV PE++SL+EDP FRVRK XXXXXXXXXXXXXXXXXXX HLG ISTLP E V L+ +FT A + + + YCAFSFPAVV T+GP RWGELRD F L +DP+ VRK ++H+LHE+A++L A + +LVP E +L+D++ V++GV+ +LA F +SP RE L VL ++ ++S NWR R I+AQQL L+ L S + F V +A LL D + VR +APLL A V + L A TY+ R + + H + + D+ ++++ +P+ LA+D V NVR+ +++ LS++ +
Sbjct: 122 VLPQLALLVADTQPEVRIAAGETLVGVAKWVRGSDLGARVLTIVLRLAHDDEQEDLRMTAAVLLNELAEVLGPDLCHQFVAPEIISLAEDPIFRVRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLGPFISTLPSEAVKPALLAHFTGMASPNPQWNKEGANTMSTYCAFSFPAVVATLGPERWGELRDLFLTLCKDPARRVRKPMAHALHELARILGAKVADSELVPIFELYLQDVDHVKVGVLANLAPFLAGLSPGMRESFLPVLDDVEISSSSLNWRFRLIMAQQLQELSVLFSPAATFSVVRRLALRLLGDAIHEVRLEAAARLAPLLVRCHEADPAWMVDFVKELLALGQAETYRPR---LVLAHVLRHLSRTWDQGMFIEHMLPAAEALAQDKVHNVRLVVAQWLSEAEAD 590
BLAST of mRNA_H-paniculata_contig1643.3670.1 vs. uniprot
Match: A0A7S4G832_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4G832_9EUGL) HSP 1 Score: 265 bits (677), Expect = 3.320e-78 Identity = 163/471 (34.61%), Postives = 265/471 (56.26%), Query Frame = 1
Query: 1 TVLPTLTKLLGDNQAEVRQAAGESLVGVAGLMKPMDLGQHVLTIVLELAHDDEQEELRMTAAALLNDLAESLGNDLCKQFVTPEMVSLSEDPNFRVRKATALNLHKICKVVG-EAGIQRLLPAYXXXXXXXXXXXXXXXXXXXVEMSKAVGPEVSLRELQPVFVRLASEDASKLVRTGALQHLGRLISTLPGECVTENLVQYFTATAIESMGDPVADAELRLYCAFSFPAVVLTIGPARWGELRDSFGVLLRDPSWSVRKTLSHSLHEVAKVLTASDVEEDLVPAMEAFLRDMEDVRLGVIRHLADFFEQMSPDRREKHLNVLVEILQTTSPFNWRLREILAQQLPHLAPLLSLDSVFFAVVPVAFGLLNDPVAVVRERTFEVVAPLLQLAGAHSGARQASMVSRVRELAHAHTYQARQMYVYICHSMAIVGSPQDRRL-YVQEFVPSLAELARDGVVNVRIAMSRTLSKS 1407
T LP +LL D EV +A +L+ + L+ + +L +V+ LAHD+ E+ R+ AA L N+LA G LCK V E+V+L++D +F VRK A NL KI KV+G E + +L P + E+S+ + L +F R +ED S+ VR A Q LG LIST VT L++ FT A +S D++ YCAFSFPAVV ++G W +L ++ L++D W VRK+L+HSLHE+A+++ E+ L A + FL+D+++V++GV+ ++++F E + ++REK++ V+ ++ T NWRLR+++AQ+L +LA L+S + + + LL D VA VR+ +++ +L+ + ++ +++LA + YQ RQM+VYI ++ S L + +EF+ +L +LA D V NVR+A+++ LS S
Sbjct: 115 TFLPYTFELLVDKNVEVGASAVNALIKLVELVNQEHVEPQLLNVVVTLAHDERAEDYRVVAAQLFNELAPRFGEQLCKDVVVKEVVTLADDMSFSVRKTVASNLGKIGKVIGQEESVNKLFPIFLQLSKDDIWGVRKACAESICEISEGI-TRTHRPNLFEIFERF-TEDVSRWVRVAAYQQLGPLISTCEKGEVTPRLLKCFTDMAFQSESGN--DSDFAEYCAFSFPAVVQSVGKENWNDLEGAYLTLIKDVQWKVRKSLAHSLHEIARIVQTEITEKTLTQAFDLFLKDLDEVKVGVVGNISEFIEVLGDEQREKYIPVICQLPSETD--NWRLRKMIAQKLGNLAALVSPATCRGTIAELGMRLLEDSVADVRQASYKSCGSILRRLCQGERDDREQFLTYIKKLATSTNYQVRQMFVYIAQEVSEQESEDPSVLIFREEFLDALVDLAGDRVPNVRLALAKVLSNS 579
BLAST of mRNA_H-paniculata_contig1643.3670.1 vs. uniprot
Match: A0A329S8N1_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329S8N1_9STRA) HSP 1 Score: 265 bits (676), Expect = 1.200e-76 Identity = 187/479 (39.04%), Postives = 259/479 (54.07%), Query Frame = 1
Query: 52 RQAAGESLVGVAGLMKPMDLGQHVLTIVLELAHDDEQEELRMTAAALLNDLAESLGNDLCKQFVTPEMVSLSEDPNFRVRKATALNLHKICKVVGEAGIQRLLPAYXXXXXXXXXXXXXXXXXXXVEMSKAVGPEVSLRELQPVFVRLASEDASKLVRTGALQHLGRLISTLPGECVTENLVQYFTA---TAIESMGDPVADAELRLYCAFSFPAVVLTIGPARWGELRDSFGVLLRDPSWSVRKTLSHSLHEVAKVLTASDVEEDLVPAMEAFLRDMEDVRLGVIRHLADFFEQMSPDRREKHLNVLVEILQTTSPFNWRLREILAQQLPHLAPLLSLDSVFFAVVPVAFGLLNDPVAVVRERTFEVVAPLLQLAGAHSGARQASMVSRVRELAHAHTYQARQMYVYICHSMAIVGSPQD---------------RRLYVQEFVPSLAELARDGVVNVRIAMSRTLSKSPGEVMIYSD 1434
R AA ESLV +A L+KP D GQHVLTIVL LAHDD+ E+ R++A +L N LAE G +LC+QF PE++SLSEDP FRVRK TAL+ +CK XXXXXXXXXXXXXXXXXXX VR A Q LG ++ L + V++ LV +FT+ TA +G + +++ +CAF+FPAVV +GPA W +L +F +L D W +R++ ++SLHE+A++L E L A +++L D++DVRLGV+ H ADF E +SP RE +L VL E + WR RE+L+ QL L + ++ F + P+ F L+ DPV+VVRE+++ PLL + + ++V + LA + YQ RQ +V IC S S +D R + + LA D V NVR+ S T K +SD
Sbjct: 135 RSAASESLVEMAALVKPEDQGQHVLTIVLPLAHDDDNEQFRISAVSLYNGLAEHFGPELCQQFCVPELISLSEDPVFRVRKCTALSFSNVCKTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWVRMAAYQSLGPFLAALEKDQVSDELVGHFTSMATTAASQLGGS-GEVDIKFHCAFNFPAVVSILGPADWLKLSPAFELLHNDTFWKIRRSFAYSLHELARILGQGITETQLATAFDSYLHDVQDVRLGVMLHFADFLENVSPSFRESYLPVLTEFDSFDNTTKWRFREVLSGQLAQLCHTFTPEATFSVIYPLVFKLITDPVSVVREQSYHAC-PLLVARLSSNPEWLTAVVDKFVTLAKSSHYQDRQCFVKICASFLSTTSRRDEDADEAPENAKADAARSFFSSKLAAVFFTLALDPVSNVRVVFSETAIKHQQLCREHSD 611
BLAST of mRNA_H-paniculata_contig1643.3670.1 vs. uniprot
Match: A0A836CCL0_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCL0_9STRA) HSP 1 Score: 258 bits (660), Expect = 6.380e-75 Identity = 204/492 (41.46%), Postives = 250/492 (50.81%), Query Frame = 1
Query: 223 DLCKQFVTPEMVSLSEDPNFRVRKATALNLHKICKVVGEAGIQ-RLLPAYXXXXXXXXXXXXXXXXXXXVEMSKAVGPEV---------------------------------------SLRELQPVFVRLASEDASKLVRTGALQHLGRLISTLPGECVTENLVQYFTATAIES-------------------MGDPVAD------------------AELRLYCAF--------------SFPAVVLTIGPARWGELRDSFGVLLRDPSWSVRKTLSHSLHEVAKVLTASDVEEDLVPAMEAFLRDMEDVRLGVIRHLADFFEQMSPDRREKHLNVLVE---------ILQTTSPFNWRLREILAQQLPHLAPLLSLDSVFFAVVPVAFGLLNDPVAVVRERTFEVVAPLLQLAGAHSGARQASMVSRVRELAHAHTYQARQMYVYICHSMAIVGSPQDRRLYVQEFVPSLAELARDGVVNVRIAMSRTL 1398
DLCKQFVTP+MVSL EDP FRVRKATALNLH +C+VVG A + RLLPAYXXXXXXXXXXXXXXXXXXX S+ QP D + LQHLG ISTLP E VT +LV YFT + + PV + AELRLYCAF SFPAVV+T+G ARW ELR+++ L RD W+VRKTL+HSLHE+AKVL + VEEDL+P +E FL D+E+VR+GV+ L+ F +SP RE+HL +L + +L+++S FNWRLR++LA QLP L L S DS ++P+ LL+DPV+ VRER QMY+YIC + D +V EF+PSLAELA D VVNVRIA+SRTL
Sbjct: 10 DLCKQFVTPDMVSLGEDPVFRVRKATALNLHNVCRVVGAADSRDRLLPAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRNGALQHLCIFVMTRHCVESMMTCQPAAASCRIADTADYFN---LQHLGPFISTLPAEKVTPHLVGYFTRAIVAADSAXXXXXXXXXXXXXXXXXSAPVFNSAAYNGNSXXXXXXXXXXAELRLYCAFRYCTGGXXXXXXXXSFPAVVVTLGGARWPELREAYQCLTRDREWNVRKTLAHSLHEIAKVLGTAQVEEDLLPELEFFLSDVEEVRVGVVCRLSAVFATLSPACRERHLPLLTQASSNLRLPLVLESSSAFNWRLRDLLAGQLPQLIALFSPDSAHSTLLPLTLKLLDDPVSAVRER---------------------------------------QMYIYICQRLQAYLPRDD---FVSEFMPSLAELATDRVVNVRIALSRTL 456 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1643.3670.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1643.3670.1 >prot_H-paniculata_contig1643.3670.1 ID=prot_H-paniculata_contig1643.3670.1|Name=mRNA_H-paniculata_contig1643.3670.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=479bp TVLPTLTKLLGDNQAEVRQAAGESLVGVAGLMKPMDLGQHVLTIVLELAHback to top mRNA from alignment at H-paniculata_contig1643:5067..20452+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1643.3670.1 ID=mRNA_H-paniculata_contig1643.3670.1|Name=mRNA_H-paniculata_contig1643.3670.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=15386bp|location=Sequence derived from alignment at H-paniculata_contig1643:5067..20452+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1643:5067..20452+ >mRNA_H-paniculata_contig1643.3670.1 ID=mRNA_H-paniculata_contig1643.3670.1|Name=mRNA_H-paniculata_contig1643.3670.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2874bp|location=Sequence derived from alignment at H-paniculata_contig1643:5067..20452+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |