mRNA_H-paniculata_contig1056.367.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1056.367.1 vs. uniprot
Match: A0A6H5L915_9PHAE (Na_H_Exchanger domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L915_9PHAE) HSP 1 Score: 220 bits (560), Expect = 5.940e-62 Identity = 121/172 (70.35%), Postives = 141/172 (81.98%), Query Frame = 3 Query: 672 RTSGFDTVVAAVYIYCLGA*FMYS----IRQAGALFAGILMMDSPYSKKAYACMQPLTSLFGGMYLGSLGMIANPAFLWSNFGRILGCVVLLLLIKFVIVAMVMRSFGFSLEASTLAGACMAQVSEISLFFVARVQHLELIPRPHYLMSVATTIILMAASPLVIKGLQRYSG 1175 ++SG T+ AV YCLG + +AGALFAG+LM+DSP+++KA+A MQPLTSLFGGMYLGSLGMI NPAF+ NFG +LGCVV+L+LIK +IVAMVM+SFGFS EASTLAGACMAQVSEISLFFVAR QHL+LI R HYLM+VATT+ILM ASPLVIKGLQ G Sbjct: 51 QSSGLFTL--AVVSYCLGVALVCERLDLSHEAGALFAGLLMVDSPFAQKAHARMQPLTSLFGGMYLGSLGMIVNPAFMVWNFGDVLGCVVMLVLIKLLIVAMVMKSFGFSWEASTLAGACMAQVSEISLFFVARAQHLKLISRHHYLMTVATTVILMVASPLVIKGLQAVHG 220
BLAST of mRNA_H-paniculata_contig1056.367.1 vs. uniprot
Match: D7FYX0_ECTSI (Na_H_Exchanger domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYX0_ECTSI) HSP 1 Score: 218 bits (556), Expect = 1.830e-57 Identity = 121/172 (70.35%), Postives = 140/172 (81.40%), Query Frame = 3 Query: 672 RTSGFDTVVAAVYIYCLGA*FMYS----IRQAGALFAGILMMDSPYSKKAYACMQPLTSLFGGMYLGSLGMIANPAFLWSNFGRILGCVVLLLLIKFVIVAMVMRSFGFSLEASTLAGACMAQVSEISLFFVARVQHLELIPRPHYLMSVATTIILMAASPLVIKGLQRYSG 1175 ++SG T+ V YCLG + +AGALFAG+LM+DSP+++KA+A MQPLTSLFGGMYLGSLGMI NPAF+ NFG +LGCVV+L+LIK +IVAMVM+SFGFS EASTLAGACMAQVSEISLFFVAR QHL+LI R HYLM+VATTIILM ASPLVIKGLQ G Sbjct: 421 QSSGLFTL--GVVSYCLGVALVCERLNLSHEAGALFAGLLMVDSPFAQKAHARMQPLTSLFGGMYLGSLGMIVNPAFMVWNFGDVLGCVVMLVLIKLLIVAMVMKSFGFSWEASTLAGACMAQVSEISLFFVARAQHLKLIRRHHYLMTVATTIILMVASPLVIKGLQAVHG 590
BLAST of mRNA_H-paniculata_contig1056.367.1 vs. uniprot
Match: A0A7S2HHK2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HHK2_9STRA) HSP 1 Score: 144 bits (362), Expect = 9.540e-33 Identity = 79/165 (47.88%), Postives = 110/165 (66.67%), Query Frame = 3 Query: 702 AVYIYCLG----A*FMYSIRQAGALFAGILMMDSPYSKKAYACMQPLTSLFGGMYLGSLGMIANPAFLWSNFGRILGCVVLLLLIKFVIVAMVMRSFGFSLEASTLAGACMAQVSEISLFFVARVQHLELIPRPHYLMSVATTIILMAASPLVIKGLQRYSGFSF 1184 AV YCLG + ++ +AGALFAG+++MD+P+ ++A ++PLTSLFGGMYL SLGMI +P FL + G I+ V ++ +K +V VMRSFGF+L AS AG +AQVSE+SLF VAR Q L L+ R YL+ +ATT+ L+A +PL ++R F Sbjct: 274 AVVTYCLGMSLLSEWLELSHEAGALFAGLVLMDTPHVQRAAQAVEPLTSLFGGMYLASLGMIISPQFLLGHLGAIMSYVFVIYFLKVFVVTFVMRSFGFALAASLAAGVLLAQVSEVSLFLVARAQQLGLVSRHVYLLMLATTVTLLAVAPLASNMVKRVDKLDF 438
BLAST of mRNA_H-paniculata_contig1056.367.1 vs. uniprot
Match: W7U641_9STRA (Sodium hydrogen exchanger n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U641_9STRA) HSP 1 Score: 135 bits (339), Expect = 5.870e-29 Identity = 81/174 (46.55%), Postives = 110/174 (63.22%), Query Frame = 3 Query: 666 ALRTSGFDTVVAAVYIYCLG----A*FMYSIRQAGALFAGILMMDSPYSKKAYACMQPLTSLFGGMYLGSLGMIANPAFLWSNFGRILGCVVLLLLIKFVIVAMVMRSFGFSLEASTLAGACMAQVSEISLFFVARVQHLELIPRPHYLMSVATTIILMAASPL---VIKGLQR 1166 A + D + + YCL +M +AGAL AG+++ D P KA A M+PLT LFGGMYLGSLGMI +PAFL + G IL CV ++++IK V++ MRS G+SL+AS L MAQ+SE+SLF V+R Q +LI R YLM VATT++L+ +P +K L+R Sbjct: 498 AENSLSLDLFILGLVAYCLLMSLLTEWMGLSYEAGALLAGLIVADVPQVGKAVAVMEPLTCLFGGMYLGSLGMILSPAFLAHHAGTILLCVAVMIVIKVASVSLGMRSLGYSLKASVLGALTMAQISELSLFLVSRAQEYKLISRQVYLMVVATTVVLLMLTPFSSHALKHLER 671
BLAST of mRNA_H-paniculata_contig1056.367.1 vs. uniprot
Match: A0A7S2WCP4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WCP4_9STRA) HSP 1 Score: 123 bits (309), Expect = 3.700e-27 Identity = 65/171 (38.01%), Postives = 104/171 (60.82%), Query Frame = 3 Query: 645 CLMIVGHALRTSGFDTVVAAVYIYCLGA*FMYS----IRQAGALFAGILMMDSPYSKKAYACMQPLTSLFGGMYLGSLGMIANPAFLWSNFGRILGCVVLLLLIKFVIVAMVMRSFGFSLEASTLAGACMAQVSEISLFFVARVQHLELIPRPHYLMSVATTIILMAASPL 1145 C+ ++ R+ AV YCLG + +AGAL AG++++DSP++++ ++PL SLFGG+YL SLGMI +P FL + G ++ V ++ L+K +++ V+R F+ A+ G MAQ+SE+SLFF+AR L L+ R +YL +A T+ L+A +PL Sbjct: 122 CMQMLSSPGRSLNPSLFTMAVTSYCLGLSLVCEWFDLSHEAGALIAGLVLVDSPHAQRTAQAIEPLASLFGGIYLASLGMIMSPVFLLDHLGPVMAYVAVIYLLKVLVITRVVRGLRFAAAAAMSTGVIMAQISEVSLFFIARAHQLGLVSRKNYLTVLAVTVTLLAVTPL 292
BLAST of mRNA_H-paniculata_contig1056.367.1 vs. uniprot
Match: F0YPR3_AURAN (Na_H_Exchanger domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YPR3_AURAN) HSP 1 Score: 123 bits (309), Expect = 1.100e-26 Identity = 63/140 (45.00%), Postives = 100/140 (71.43%), Query Frame = 3 Query: 747 RQAGALFAGILMMDSPYSKKAYACMQPLTSLFGGMYLGSLGMIANPAFLWSNFGRILGCVVLLLLIKFVIVAMVMRSFGFSLEASTLAGACMAQVSEISLFFVARVQHLELIPRPHYLMSVATTIILMAASPLVIKGLQR 1166 +AGALFAG++++ +P+ KA + PL +LFGGMY+ SLG++A+P ++ ++FG I+G V ++++IK +V ++ + GFS A+T AG AQVSE++LF AR HL+L+ R YL ++TTI+L+A +PL I L+R Sbjct: 187 HEAGALFAGLVLVGTPHVDKAKRAVSPLAALFGGMYVASLGLVASPQYVRAHFGAIMGRVTVVVVIKVAVVGPMVYALGFSRAAATGAGFAFAQVSEVALFVAARAHHLQLVTRHTYLDVLSTTIVLLAIAPLFIHVLKR 326
BLAST of mRNA_H-paniculata_contig1056.367.1 vs. uniprot
Match: A0A7S2WDJ5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WDJ5_9STRA) HSP 1 Score: 123 bits (309), Expect = 1.170e-25 Identity = 65/171 (38.01%), Postives = 104/171 (60.82%), Query Frame = 3 Query: 645 CLMIVGHALRTSGFDTVVAAVYIYCLGA*FMYS----IRQAGALFAGILMMDSPYSKKAYACMQPLTSLFGGMYLGSLGMIANPAFLWSNFGRILGCVVLLLLIKFVIVAMVMRSFGFSLEASTLAGACMAQVSEISLFFVARVQHLELIPRPHYLMSVATTIILMAASPL 1145 C+ ++ R+ AV YCLG + +AGAL AG++++DSP++++ ++PL SLFGG+YL SLGMI +P FL + G ++ V ++ L+K +++ V+R F+ A+ G MAQ+SE+SLFF+AR L L+ R +YL +A T+ L+A +PL Sbjct: 381 CMQMLSSPGRSLNPSLFTMAVTSYCLGLSLVCEWFDLSHEAGALIAGLVLVDSPHAQRTAQAIEPLASLFGGIYLASLGMIMSPVFLLDHLGPVMAYVAVIYLLKVLVITRVVRGLRFAAAAAMSTGVIMAQISEVSLFFIARAHQLGLVSRKNYLTVLAVTVTLLAVTPL 551
BLAST of mRNA_H-paniculata_contig1056.367.1 vs. uniprot
Match: A0A8J2SYW5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SYW5_9STRA) HSP 1 Score: 116 bits (290), Expect = 4.480e-23 Identity = 59/140 (42.14%), Postives = 96/140 (68.57%), Query Frame = 3 Query: 747 RQAGALFAGILMMDSPYSKKAYACMQPLTSLFGGMYLGSLGMIANPAFLWSNFGRILGCVVLLLLIKFVIVAMVMRSFGFSLEASTLAGACMAQVSEISLFFVARVQHLELIPRPHYLMSVATTIILMAASPLVIKGLQR 1166 +AGALFAG++++ +P+ +A + PL +LFGGMY+ SLG++ +P +L ++ ++ V+ ++ +K + A V+ + GFS +A+ AGA AQVSE++LF AR LEL+ R YL ++TTI+L+A +PL I GL+R Sbjct: 516 HEAGALFAGLVLVGTPHVDRAKRAVAPLAALFGGMYVASLGLVVSPRYLQNHASAVVAHVLFVVCVKVAVTAPVVYALGFSKQAAAGAGAVFAQVSEVALFVAARAHELELLARHTYLDVLSTTIVLLAVAPLFIHGLRR 655
BLAST of mRNA_H-paniculata_contig1056.367.1 vs. uniprot
Match: A0A7S1ZZG6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZZG6_9STRA) HSP 1 Score: 107 bits (267), Expect = 7.530e-21 Identity = 61/140 (43.57%), Postives = 93/140 (66.43%), Query Frame = 3 Query: 750 QAGALFAGILMMDSPYSKKAYACMQPLTSLFGGMYLGSLGMIANPAFLWSNFGRILGCVVLLLLIKFVIVAMVM-RSFGFSLEASTLAGACMAQVSEISLFFVARVQHLELIPRPHYLMSVATTIILMAASPLVIKGLQR 1166 +AGALFAGI+++ SP+ K ++ +TS+FGGM+L S+G I +PAF+ S+ G I+ VV + L K V+V++V+ R F + + S G+ MAQ+SEISL +A+ Q L L+ R YLM + TT IL++ +P L+R Sbjct: 266 EAGALFAGIVLIKSPHVPKVLDSIESITSVFGGMFLTSMGTIISPAFVMSHIGTIMLLVVCIGLFKMVLVSIVLNRCFDYGITPSLAVGSAMAQISEISLVVLAKSQRLGLVSRKVYLMLIPTTCILLSLAPFSASHLRR 405
BLAST of mRNA_H-paniculata_contig1056.367.1 vs. uniprot
Match: A0A7S3XPM7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPM7_HETAK) HSP 1 Score: 99.0 bits (245), Expect = 2.260e-19 Identity = 56/158 (35.44%), Postives = 93/158 (58.86%), Query Frame = 3 Query: 693 VVAAVYIYCLGA*FMYSIRQAGALFAGILMMDSPYSKKAYACMQPLTSLFGGMYLGSLGMIANPAFLWSNFGRILGCVVLLLLIKFVIVAMVMRSFGFSLEASTLAGACMAQVSEISLFFVARVQHLELIPRPHYLMSVATTIILMAASPLVIKGLQR 1166 VVA V L + + + GA+ AG+LM +PY+++A + ++PL SLFGGMYL SLGMI NP ++ ++FG + ++++ +KF + ++ G A+ AG +AQVSE+ L+ + + L+ R YL++ A + L+AASP L+ Sbjct: 48 VVAYVLGLALASEHLQLSLEVGAVAAGLLMTYTPYARQAESTLEPLMSLFGGMYLASLGMIINPRYILAHFGELALWCLVVVAVKFAAAWVALKRLGAGDVAAYAAGFSLAQVSEVGLYLAGKARRRGLLGRHAYLLAAALCVALLAASPFASHALRH 205 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1056.367.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1056.367.1 >prot_H-paniculata_contig1056.367.1 ID=prot_H-paniculata_contig1056.367.1|Name=mRNA_H-paniculata_contig1056.367.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=249bp MYSIRQAGALFAGILMMDSPYSKKAYACMQPLTSLFGGMYLGSLGMIANPback to top mRNA from alignment at H-paniculata_contig1056:9470..13295- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1056.367.1 ID=mRNA_H-paniculata_contig1056.367.1|Name=mRNA_H-paniculata_contig1056.367.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3826bp|location=Sequence derived from alignment at H-paniculata_contig1056:9470..13295- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1056:9470..13295- >mRNA_H-paniculata_contig1056.367.1 ID=mRNA_H-paniculata_contig1056.367.1|Name=mRNA_H-paniculata_contig1056.367.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1494bp|location=Sequence derived from alignment at H-paniculata_contig1056:9470..13295- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |