mRNA_H-paniculata_contig16422.3667.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig16422.3667.1 vs. uniprot
Match: A0A6H5JZW3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZW3_9PHAE) HSP 1 Score: 207 bits (528), Expect = 2.280e-58 Identity = 109/166 (65.66%), Postives = 129/166 (77.71%), Query Frame = 3
Query: 3 EGVAGVSSSEKDDSRTQIEYIEEPLRDPRLLGDFWEKSGRILPYALDESLAMGREVFKDDELTQMRGCGAFVIKLSVVGGLSRAARLCRLAKLAGAKPVISSAFESGVGLAHASILASVFCVQDVAHGLGTYDRLDEDVTSPGFSSAVLKGRVDIVACQALLDRVA 500
EGVA S+ D + +EYIEEPLR+PR LG FWE+SG ++PYALDESLAMGRE F D EL Q+ GC AFV+K+SVVGGLSR+ARLC LA+ GA+ V+SSAFE+GVGLAHASILAS F VAHGL TY RL DV +PGF+S V G+VD +AC+ LLDRVA
Sbjct: 944 EGVATGGSTRGVDL-SLVEYIEEPLREPRSLGKFWERSGGVVPYALDESLAMGREKFTDKELLQLEGCAAFVVKVSVVGGLSRSARLCGLARHLGAEAVLSSAFETGVGLAHASILASCFTTPGVAHGLSTYSRLQGDVATPGFASTVSGGKVDTLACEDLLDRVA 1108
BLAST of mRNA_H-paniculata_contig16422.3667.1 vs. uniprot
Match: D8LMF2_ECTSI (Similar to Isochorismate Synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMF2_ECTSI) HSP 1 Score: 200 bits (509), Expect = 1.020e-55 Identity = 107/166 (64.46%), Postives = 125/166 (75.30%), Query Frame = 3
Query: 3 EGVAGVSSSEKDDSRTQIEYIEEPLRDPRLLGDFWEKSGRILPYALDESLAMGREVFKDDELTQMRGCGAFVIKLSVVGGLSRAARLCRLAKLAGAKPVISSAFESGVGLAHASILASVFCVQDVAHGLGTYDRLDEDVTSPGFSSAVLKGRVDIVACQALLDRVA 500
EGV GV S +EYIEEPLR+PR LG FWE+SG I+PYALDESLAMGRE F D ++ GC AFV+K+SVVGGLSR+ARLC LA+ GA+ V+SSAFE+GVGLAHASILAS F VAHGL TY RL DV +PGF+S V G+VD +AC+ LLDRVA
Sbjct: 2464 EGVEGVDLS-------LVEYIEEPLREPRSLGKFWERSGGIVPYALDESLAMGREKFTD----KLEGCAAFVVKVSVVGGLSRSARLCGLARRLGAEAVLSSAFETGVGLAHASILASCFTTPGVAHGLSTYSRLQGDVATPGFASTVSGGKVDTLACEELLDRVA 2618
BLAST of mRNA_H-paniculata_contig16422.3667.1 vs. uniprot
Match: A0A835Z855_9STRA (Enolase C-terminal domain-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z855_9STRA) HSP 1 Score: 103 bits (258), Expect = 1.510e-22 Identity = 69/158 (43.67%), Postives = 92/158 (58.23%), Query Frame = 3
Query: 42 SRTQIEYIEEPLRDPRLLGDFWEKSGRILPYALDESLAMGREVFKDDELTQMRGCGAFVIKLSVVGGLSRAARLCRLAKLAGAKPVISSAFESGVGLAHASILASVFCVQDVAHGLGTYDRLDED----VTSPGFSSAVLKG-RVDIVACQALLDRVA 500
+R +EYIEEPLRDPR L F + + P+ALDES+ G V +LT +R A V+K +V+GG+ + A GA VI+SAFE+GV L+H +ILAS + HGL T+DRL ++ V P FS AV G +D+ CQ LLD A
Sbjct: 267 ARNAVEYIEEPLRDPRQLPRFSDATDGF-PFALDESVTDG--VGSVADLTDLRPT-ALVLKPTVMGGVEETVSWAQAAAHCGAAVVITSAFETGVCLSHLAILASALSSEGTCHGLSTFDRLSKEGEGRVWLPDFSEAVYDGDMIDVAVCQRLLDTCA 420
BLAST of mRNA_H-paniculata_contig16422.3667.1 vs. uniprot
Match: A0A4D9D2W1_9STRA (MR_MLE domain-containing protein n=6 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2W1_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 3.200e-16 Identity = 68/182 (37.36%), Postives = 93/182 (51.10%), Query Frame = 3
Query: 9 VAGVSSSEKDDSRTQIEYIEEPLRDPRLLGDFWEKSGRILPYALDESLAMGREVFKDDELTQMRGCGAFVIKLSVVGGLSRAARLCRLAKLAGAKPVISSAFESGVGLAHASILASVF------------CVQDVAHGLGTYD---RLDEDV--TSPGFSSAVLKGR----VDIVACQALLD 491
+ G+S EK IEY+EEP +DP + + +++ + L +ALDESLA + EL M G A V+K +V+GGL + L L G V+SS+FES +GLAH ++LA+V V HGL TYD R E+ GFS V G VD+V C+ LLD
Sbjct: 1808 IRGLSHPEK------IEYLEEPCKDPLCIPEVHKRTEQRLRFALDESLACPPLPYI--ELLSMEGLCALVLKPTVLGGLKQCLALHSLGLTKGLYSVVSSSFESSIGLAHLALLAAVLNSGTDTVRQIQTAGVHVLHGLSTYDVFVRSAEEWWGNGGGFSRLVASGSRSVLVDVVGCEELLD 1981
BLAST of mRNA_H-paniculata_contig16422.3667.1 vs. uniprot
Match: A0A838JY37_9ACTN (O-succinylbenzoate synthase n=1 Tax=Rubrobacteraceae bacterium TaxID=2740537 RepID=A0A838JY37_9ACTN) HSP 1 Score: 84.0 bits (206), Expect = 6.450e-16 Identity = 56/126 (44.44%), Postives = 74/126 (58.73%), Query Frame = 3
Query: 42 SRTQIEYIEEPLRDPRLLGDFWEKSGRILPYALDESLAMGREVFKDDELTQMRGCGAFVIKLSVVGGLSRAARLCRLAKLAGAKPVISSAFESGVGLAHASILASVFCVQDVAHGLGTYDRLDEDV 419
S + EY+EEPL DP + D + SG +P ALDESL +G E DEL + R A V+K +++GG+SR R+ A L G PV+SSA+ESGVG A +A+ + V GL TY L DV
Sbjct: 128 SAARFEYVEEPLADPVRMPDLVQHSG--VPVALDESL-VGME---PDELEEHRYARAIVLKPTLLGGISRTLRMAERALLLGMTPVVSSAYESGVGTAALVAMAASIGARPVPAGLDTYRMLAGDV 247
BLAST of mRNA_H-paniculata_contig16422.3667.1 vs. uniprot
Match: A0A7C2FNF2_9BACT (O-succinylbenzoate synthase n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7C2FNF2_9BACT) HSP 1 Score: 84.3 bits (207), Expect = 1.100e-15 Identity = 50/123 (40.65%), Postives = 76/123 (61.79%), Query Frame = 3
Query: 54 IEYIEEPLRDPRLLGDFWEKSGRILPYALDESLA-MGREVFKDDELTQMRGCGAFVIKLSVVGGLSRAARLCRLAKLAGAKPVISSAFESGVGLAHASILASVFCVQDVAHGLGTYDRLDEDV 419
IEY+EEP+ D + G F+E++G LP ALDE+L G ++ D + GAF++K S++GG R A R AK G KPVIS F+S + L ++ A+ + D+AHG+GT++ L +D+
Sbjct: 210 IEYVEEPVGDIKDHGAFFEQTG--LPIALDETLVECGCDIGND-----LSHVGAFILKPSLLGGFDRTAEFIRFAKENGIKPVISCTFQSSLTLCSFALFAAKMGLSDIAHGIGTFEWLGDDL 325
BLAST of mRNA_H-paniculata_contig16422.3667.1 vs. uniprot
Match: A0A6J4RPY7_9ACTN (o-succinylbenzoate synthase n=1 Tax=uncultured Rubrobacteraceae bacterium TaxID=349277 RepID=A0A6J4RPY7_9ACTN) HSP 1 Score: 84.0 bits (206), Expect = 1.620e-15 Identity = 63/153 (41.18%), Postives = 87/153 (56.86%), Query Frame = 3
Query: 51 QIEYIEEPLRDPRLLGDFWEKSGRILPYALDESLAMGREVFKDDELTQMRGCGAFVIKLSVVGGLSRAARLCRLAKLAGAKPVISSAFESGVGLAHASILASVFCVQDVAHGLGTYDRLDEDVTSPGFSSAVLKGRV-DIVACQALL-DRVAP 503
+IEY+EEPL DP L +F K G + ALDESL +G E + L + GA V+K S++GGLSR RL A G +PV+SSA+E+GVG A LA+ ++ GL TY RL DV P + RV + V+ ++ DR++P
Sbjct: 215 EIEYLEEPLADPAGLEEFALKGG--VKVALDESL-VGME---PESLAEHPYAGAVVLKPSLLGGLSRTLRLAERAVGLGMRPVVSSAYETGVGTAALVALAAGIGTGEIPAGLDTYRRLAGDVIEPRLPLPAPRLRVREAVSWNGIVRDRLSP 361
BLAST of mRNA_H-paniculata_contig16422.3667.1 vs. uniprot
Match: A0A7W1CZ70_9ACTN (o-succinylbenzoate synthase n=1 Tax=Rubrobacteraceae bacterium TaxID=2740537 RepID=A0A7W1CZ70_9ACTN) HSP 1 Score: 82.0 bits (201), Expect = 7.550e-15 Identity = 55/132 (41.67%), Postives = 75/132 (56.82%), Query Frame = 3
Query: 24 SSEKDDSRTQIEYIEEPLRDPRLLGDFWEKSGRILPYALDESLAMGREVFKDDELTQMRGCGAFVIKLSVVGGLSRAARLCRLAKLAGAKPVISSAFESGVGLAHASILASVFCVQDVAHGLGTYDRLDEDV 419
++E + + EY+EEPL DP L D + G +P LDESL + +EL + R AFV+K +++GG+SR R+ A G PVISSA+ESGVG A LA+ + VA GL TY + EDV
Sbjct: 202 AAEFSSAAARFEYVEEPLADPAQLPDLVREFG--VPVTLDESLVS----MEPEELEEHRYALAFVLKPTLLGGISRTLRVAERALRLGVTPVISSAYESGVGTAALVALAAGIGDRPVAAGLDTYRTMAEDV 327
BLAST of mRNA_H-paniculata_contig16422.3667.1 vs. uniprot
Match: A0A7S1WEX3_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1WEX3_ALECA) HSP 1 Score: 80.9 bits (198), Expect = 7.700e-15 Identity = 61/166 (36.75%), Postives = 81/166 (48.80%), Query Frame = 3
Query: 54 IEYIEEPLRDPRLLGDFWEKSGRILP----YALDESLAMGREVFKDDELTQMRGCGAFVIKLSVVGGLSRAARLCRLAKLAGAKPVISSAFESGVGLAHASILASVFCVQ--------DVAHGLGTYDRLDEDVTSPGFSSAVLKGR-----VDIVACQALLDRVA 500
IEY EEP+ L+ D WE+ ++ A+DESL G+ +D L + A +I + GL R L A G +PV+SSAFESGV L H +ILA+ HGLGT+ L EDV P F+ V G D+++CQ LDR A
Sbjct: 90 IEYWEEPVAPGNLVRD-WERLSSLVDERVKLAVDESLTEGKVGVED--LEACKAPVAALILKPALQGLERTLELAAWAVARGQRPVLSSAFESGVALCHFAILAASMTPLPGLRQSEVSACHGLGTFTHLAEDVLRPPFADLVRNGHGSGWGADLLSCQGALDRTA 252
BLAST of mRNA_H-paniculata_contig16422.3667.1 vs. uniprot
Match: A0A7S2PK40_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2PK40_9DINO) HSP 1 Score: 82.4 bits (202), Expect = 9.360e-15 Identity = 63/177 (35.59%), Postives = 84/177 (47.46%), Query Frame = 3
Query: 36 DDSRTQIEYIEEPLR----DPRLLGDFWE----KSGRILPYALDESLAMGREVFKDDELTQMRGCGAFVIKLSVVGGLSRAARLCRLAKLAGAKPVISSAFESGVGLAHASILASVFC--------VQDVAHGLGTYDRLDEDVTSPGFSSAVLKGR------VDIVACQALLDRVA 500
D + EY+EEP+R P WE ++ R + +ALDESL + + Q A V+ + G+ + L A G++PV+SSAFESGV LAH +ILA+ HGLGT+ RL EDV P F VL+ R VD + CQ LDR A
Sbjct: 308 DSTVAMTEYLEEPVRWNALGPEAFLQDWETLAARTERRVRFALDESLT--EQDLGTHHVDQCGASVAAVVLKPALQGMEQTMSLAAWAIARGSRPVVSSAFESGVALAHFAILAAAMTPPLWQTEDTVSACHGLGTFARLAEDVLDPPFEDLVLERRPCGGWHVDALRCQEALDRTA 482 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16422.3667.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig16422.3667.1 >prot_H-paniculata_contig16422.3667.1 ID=prot_H-paniculata_contig16422.3667.1|Name=mRNA_H-paniculata_contig16422.3667.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=122bp MGREVFKDDELTQMRGCGAFVIKLSVVGGLSRAARLCRLAKLAGAKPVISback to top mRNA from alignment at H-paniculata_contig16422:3225..5356- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig16422.3667.1 ID=mRNA_H-paniculata_contig16422.3667.1|Name=mRNA_H-paniculata_contig16422.3667.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2132bp|location=Sequence derived from alignment at H-paniculata_contig16422:3225..5356- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig16422:3225..5356- >mRNA_H-paniculata_contig16422.3667.1 ID=mRNA_H-paniculata_contig16422.3667.1|Name=mRNA_H-paniculata_contig16422.3667.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=732bp|location=Sequence derived from alignment at H-paniculata_contig16422:3225..5356- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |