mRNA_H-paniculata_contig16365.3641.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig16365.3641.1
Unique NamemRNA_H-paniculata_contig16365.3641.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig16365.3641.1 vs. uniprot
Match: D7FJE9_ECTSI (PTIF2, plastid translation intiation factor 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJE9_ECTSI)

HSP 1 Score: 509 bits (1310), Expect = 1.810e-170
Identity = 264/312 (84.62%), Postives = 294/312 (94.23%), Query Frame = 1
Query:   31 GSISLLDAIRETKVVSGEAGGITQHISAYQVSTNAGSNVTFVDTPGHAAFGEMRARGANATDIVVLVVAADDGVMDQTKESIATARMASVPIVVAINKVDKPAADVQKVQNELMTFDLLPEEFGGDTQVAMVSAKQKTGLDELLEKILLQAEVLELKSNPNRMAQGVVIEAQMEKGMGTVGTILIQRGTLRVGDVFVAGGAWGKVRALMDHKGKRITEAGPSMPVQVGGFDGVPDAGEVFTVCEREDVARDLAEARRKIAREATAATLQGGLKSSVEAILSGEADTGKELFELPVMIKADVQGSEQALFNAL 966
            G  SLLDAIRETKVV+GEAGGITQH+SAYQV T+AG+++TFVDTPGHAAF EMR RGANATDIVVLVVAADDGVM+QTKESIATARMA VPIVVAINKVDK  ADVQKVQNELMTFDLLPEEFGGDTQVAMVSAKQK+GLDELLEKILLQ+EVLELKSNP+R A+GV+IEA+ME+G+GTVGT+LIQRGTLRVGD+FVAGGAWG+V+AL+DH+G+RI EAGPS PVQVGGFDGVPDAG+VFTV +RED+ARDLAEARRKIARE++AA LQGGLK+ + +ILSGEAD GKELFELPVMIKADVQGSEQAL  AL
Sbjct:  527 GKTSLLDAIRETKVVAGEAGGITQHVSAYQVKTDAGADLTFVDTPGHAAFSEMRVRGANATDIVVLVVAADDGVMEQTKESIATARMADVPIVVAINKVDKEGADVQKVQNELMTFDLLPEEFGGDTQVAMVSAKQKSGLDELLEKILLQSEVLELKSNPDRSAEGVIIEARMERGLGTVGTVLIQRGTLRVGDIFVAGGAWGRVKALIDHQGRRIKEAGPSTPVQVGGFDGVPDAGDVFTVVDREDIARDLAEARRKIARESSAAILQGGLKNDMLSILSGEADEGKELFELPVMIKADVQGSEQALQTAL 838          
BLAST of mRNA_H-paniculata_contig16365.3641.1 vs. uniprot
Match: A0A835ZAQ9_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAQ9_9STRA)

HSP 1 Score: 409 bits (1052), Expect = 4.840e-137
Identity = 216/314 (68.79%), Postives = 257/314 (81.85%), Query Frame = 1
Query:   31 GSISLLDAIRETKVVSGEAGGITQHISAYQVSTNAGSNVTFVDTPGHAAFGEMRARGANATDIVVLVVAADDGVMDQTKESIATARMASVPIVVAINKVDKPAADVQKVQNELMTFDLLPEEFGGDTQVAMVSAKQKTGLDELLEKILLQAEVLELKSNPNRMAQGVVIEAQMEKGMGTVGTILIQRGTLRVGDVFVAGGAWGKVRALMDHKGKRITEAGPSMPVQVGGFDGVPDAGEVFTVCEREDVARDLAEARRKIAREATAATLQGGLKSSVEAILSGEADTG-KELFELPVMIKADVQGSEQALFNALR 969
            G  +LLDAIR  KV SGEAGGITQ I AYQV+T +G  VTF+DTPGHAAF EMRARGANATD+VVLVVAADDGV +QTKE IATA++ASVPIVVAINK+DKP AD  +V NELM + LL  EFGGD +V  VSAK K GLD+LL+KILLQAEVLELK+NPNR AQGVVIEA M++G+GTV T LIQRGTL++GD+FVAG +WGKVR LM+H G RITEAGPS PVQV GFDGVP AG+VFTV ++E+ AR + ++RRK+ RE  AA +QG LK +VEAILSG  + G KE  ELP++++AD  GS +AL ++LR
Sbjct:   89 GKTTLLDAIRSAKVASGEAGGITQSIGAYQVTTASGQEVTFIDTPGHAAFSEMRARGANATDVVVLVVAADDGVKEQTKECIATAKLASVPIVVAINKMDKPGADPARVLNELMNYQLLSTEFGGDVEVGKVSAKNKDGLDDLLDKILLQAEVLELKANPNRAAQGVVIEAGMKQGLGTVATTLIQRGTLKIGDIFVAGASWGKVRLLMNHTGARITEAGPSTPVQVVGFDGVPGAGDVFTVVDKEETARTITDSRRKLLRENQAAQMQGDLKGNVEAILSGMLEDGAKEKMELPIVLRADGPGSAEALASSLR 402          
BLAST of mRNA_H-paniculata_contig16365.3641.1 vs. uniprot
Match: A0A7S3Y8J2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8J2_HETAK)

HSP 1 Score: 375 bits (964), Expect = 4.860e-122
Identity = 201/314 (64.01%), Postives = 248/314 (78.98%), Query Frame = 1
Query:   31 GSISLLDAIRETKVVSGEAGGITQHISAYQVSTNAGSNVTFVDTPGHAAFGEMRARGANATDIVVLVVAADDGVMDQTKESIATARMASVPIVVAINKVDKPAADVQKVQNELMTFDLLPEEFGGDTQVAMVSAKQKTGLDELLEKILLQAEVLELKSNPNRMAQGVVIEAQMEKGMGTVGTILIQRGTLRVGDVFVAGGAWGKVRALMDHKGKRITEAGPSMPVQVGGFDGVPDAGEVFTVCEREDVARDLAEARRKIAREATAATLQGGLKSSVEAIL-SGEADTGKELFELPVMIKADVQGSEQALFNALR 969
            G  SLLDAIRE +V  GEAGGITQHI AYQV T +G+ VTF+DTPGHAAF  MRARGAN TDIV+LVVAADDGVM+QT +SIA A+ A VP+VVA NK+DK  ADVQKV+NELM +DLL EE+GGD   A VSAKQ+ GLD+LLEK+LLQAE+L+L++NP+R AQG VIEA++E+G+G VGT LIQRGTLRVGDVF+AG +WGKVRAL+D +G RI EAGPS+PVQV GF+  P AG+   V + E  AR +AEAR  +++   A  L+G L+S++ AI  +GEA  G E   + V+IKADVQGS +AL ++LR
Sbjct:  232 GKTSLLDAIREARVAGGEAGGITQHIGAYQVETVSGATVTFIDTPGHAAFSAMRARGANVTDIVILVVAADDGVMEQTADSIACAKQAGVPVVVAYNKIDKDTADVQKVKNELMQYDLLMEEYGGDVMGAEVSAKQRLGLDDLLEKVLLQAELLDLRANPDRAAQGAVIEARIERGLGAVGTTLIQRGTLRVGDVFLAGASWGKVRALLDTEGNRIKEAGPSVPVQVVGFNTAPLAGDTLVVVDSEATARQIAEARGGLSKTRDALALEGDLRSNLRAIFETGEALDGVERKTVNVVIKADVQGSAEALADSLR 545          
BLAST of mRNA_H-paniculata_contig16365.3641.1 vs. uniprot
Match: A0A7S2Y1F3_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1F3_9STRA)

HSP 1 Score: 365 bits (938), Expect = 3.400e-118
Identity = 195/314 (62.10%), Postives = 242/314 (77.07%), Query Frame = 1
Query:   31 GSISLLDAIRETKVVSGEAGGITQHISAYQVSTNAGSNVTFVDTPGHAAFGEMRARGANATDIVVLVVAADDGVMDQTKESIATARMASVPIVVAINKVDKPAADVQKVQNELMTFDLLPEEFGGDTQVAMVSAKQKTGLDELLEKILLQAEVLELKSNPNRMAQGVVIEAQMEKGMGTVGTILIQRGTLRVGDVFVAGGAWGKVRALMDHKGKRITEAGPSMPVQVGGFDGVPDAGEVFTVCEREDVARDLAEARRKIAREATAATLQGGLKSSVEAILS-GEADTGKELFELPVMIKADVQGSEQALFNALR 969
            G  SLLDAIR T+V  GEAGGITQHI AYQVST+ G  +TF+DTPGHAAF EMR+RGA+ATDIV+LVVAADDGV +QT ESIA A+ A  P++VA NK+DKP ADVQK++N+LM +DLL EEFGG+   A VSAKQ TGLDELLEK++LQAEV+ELK+NPNR+  GV++EA++EKG+G V T LIQRGT+RVGD+F+AG +WG+VRAL D    +ITEAGPS PV++ GFD +P AG+ F   E E  AR++AEAR KI+R+ +A+     L SSV  I   G    G E   + V+IKADVQGS +AL  AL+
Sbjct:  228 GKTSLLDAIRSTRVTEGEAGGITQHIGAYQVSTSKGQPITFIDTPGHAAFNEMRSRGADATDIVILVVAADDGVKEQTAESIACAKQAGKPVLVAFNKIDKPGADVQKIKNQLMQYDLLMEEFGGEIMGAEVSAKQGTGLDELLEKVMLQAEVMELKANPNRLVSGVIVEAEVEKGLGPVATTLIQRGTVRVGDIFLAGTSWGRVRALRDDSDNKITEAGPSAPVKIIGFDSLPLAGDTFIGVESEQDARNIAEARGKISRDRSASKFNTDLLSSVANIFEFGAGLDGIERKTVNVVIKADVQGSAEALATALK 541          
BLAST of mRNA_H-paniculata_contig16365.3641.1 vs. uniprot
Match: A0A7S3L358_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L358_9STRA)

HSP 1 Score: 341 bits (874), Expect = 8.000e-109
Identity = 186/316 (58.86%), Postives = 237/316 (75.00%), Query Frame = 1
Query:   31 GSISLLDAIRETKVVSGEAGGITQHISAYQVSTNAGSNVTFVDTPGHAAFGEMRARGANATDIVVLVVAADDGVMDQTKESIATARMASVPIVVAINKVDKPAADVQKVQNELMTFDLLPEEFGGDTQVAMVSAKQKTGLDELLEKILLQAEVLELKSNPNRMAQGVVIEAQMEKGMGTVGTILIQRGTLRVGDVFVAGGAWGKVRALM---DHKGKRITEAGPSMPVQVGGFDGVPDAGEVFTVCEREDVARDLAEARRKIAREATAATLQGGLKSSVEAILSGEADTGKELFELPVMIKADVQGSEQALFNALR 969
            G  SLLDAIR+T V +GEAGGITQHI+AYQV  N G  +TF+DTPGHAAF +MR RGAN TD+V+LVVAADDGV  QT +SI  AR A VP++VAINK DK  AD  KV  +L  +D+L EEFGGD   + +SAK+ T LD+L++KI+LQAE+ +LK+NP+R A+G+VIEA +EKG+GTV T LI++GT+RVGDVFVAG  +G+V+AL+   D K  R+ EAGPSMPVQV GF+G+P AG++  V + E  AR LAE R++IARE  ++  Q GL SSV  + SG     KE  E+ V++KADVQGS +AL  ALR
Sbjct:  213 GKTSLLDAIRKTDVTAGEAGGITQHIAAYQVGHN-GKKITFIDTPGHAAFTDMRERGANVTDMVILVVAADDGVKQQTADSIMCARQAGVPLIVAINKCDKETADPLKVMTDLTAYDVLTEEFGGDVLSSQISAKEGTNLDDLMDKIMLQAEIQDLKANPDRDAEGIVIEANVEKGLGTVATTLIKKGTIRVGDVFVAGATYGRVKALLSTTDSK-TRLNEAGPSMPVQVVGFEGIPSAGDILAVAQDEQTARALAENRQRIARERESSFYQDGLMSSVNMVFSGG---NKEKREMCVLVKADVQGSAEALTRALR 523          
BLAST of mRNA_H-paniculata_contig16365.3641.1 vs. uniprot
Match: A0A7S2EJV6_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EJV6_TRICV)

HSP 1 Score: 338 bits (866), Expect = 1.150e-108
Identity = 191/314 (60.83%), Postives = 234/314 (74.52%), Query Frame = 1
Query:   31 GSISLLDAIRETKVVSGEAGGITQHISAYQVSTNAGSNVTFVDTPGHAAFGEMRARGANATDIVVLVVAADDGVMDQTKESIATARMASVPIVVAINKVDKPAADVQKVQNELMTFDLLPEEFGGDTQVAMVSAKQKTGLDELLEKILLQAEVLELKSNPNRMAQGVVIEAQMEKGMGTVGTILIQRGTLRVGDVFVAGGAWGKVRALMDHKGK-RITEAGPSMPVQVGGFDGVPDAGEVFTVCEREDVARDLAEARRKIAREATAATLQGGLKSSVEAILSGEADTGKELFELPVMIKADVQGSEQALFNALR 969
            G  SLLDAIR T VVSGEAGGITQ ISAYQV T+ G  +TF+DTPGHAAF +MR RGAN TDI++LVVAADD V  QT +SIA AR A VP+VVA+NK D   ADV +V+++L  +DLL E+ GG+   + VSAK K GLD+LL+K++LQAEV +LK+NPNR AQG+VIEA ++KG+GTV T LI+RGT+RVGDVFVAG   GKVRAL+   GK R+ EAGPSMPV V G +GVP AG++  V E E +AR LA++R +I RE   +  Q  L SSV  I SG A   KE  E+ V+IKADVQGS +AL  +LR
Sbjct:  218 GKTSLLDAIRSTSVVSGEAGGITQAISAYQV-THEGRKITFIDTPGHAAFTDMRERGANITDIIILVVAADDSVKQQTADSIACARQAGVPVVVAVNKCDLETADVNRVKSDLTGYDLLTEDLGGEVMCSEVSAKTKMGLDDLLDKVMLQAEVEDLKANPNRDAQGIVIEASVQKGLGTVATTLIKRGTIRVGDVFVAGSTSGKVRALIATDGKTRLKEAGPSMPVNVVGLEGVPAAGDMLVVAEDEQMARQLADSRARIEREREGSNYQSDLLSSVSDIFSGAAM--KEKREMCVVIKADVQGSAEALARSLR 528          
BLAST of mRNA_H-paniculata_contig16365.3641.1 vs. uniprot
Match: A4U0B1_9PROT (Translation initiation factor IF-2 n=1 Tax=Magnetospirillum gryphiswaldense TaxID=55518 RepID=A4U0B1_9PROT)

HSP 1 Score: 333 bits (854), Expect = 1.900e-108
Identity = 181/308 (58.77%), Postives = 226/308 (73.38%), Query Frame = 1
Query:   46 LDAIRETKVVSGEAGGITQHISAYQVSTNAGSNVTFVDTPGHAAFGEMRARGANATDIVVLVVAADDGVMDQTKESIATARMASVPIVVAINKVDKPAADVQKVQNELMTFDLLPEEFGGDTQVAMVSAKQKTGLDELLEKILLQAEVLELKSNPNRMAQGVVIEAQMEKGMGTVGTILIQRGTLRVGDVFVAGGAWGKVRALMDHKGKRITEAGPSMPVQVGGFDGVPDAGEVFTVCEREDVARDLAEARRKIAREATAA-TLQGGLKSSVEAILSGEADTGKELFELPVMIKADVQGSEQALFNAL 966
            +DA+RET VVSGEAGGITQHI AYQV+  +G  +TF+DTPGH AF  MRARGA  TDIVVLVVAADDG+M QT E+I  A+ A VPI+VAINK+DKP A  ++V+ EL+  DL+ EE GGD     VSAK++  L+ L E ILLQAEVL+LK+NP+R AQG V+EA+MEKG G V T+L+Q+GTL+VGDVFVAG  WGKVRAL+D KG R+ EAGPS PV+V G DG P AG+ F   E E  AR++A  R+++ REA +    +G L+    AI +GEA       ELPV++K DVQGS +A+  AL
Sbjct:    1 MDALRETDVVSGEAGGITQHIGAYQVTMRSGDKITFIDTPGHEAFTAMRARGAKVTDIVVLVVAADDGIMPQTVEAIRHAKAAGVPIIVAINKIDKPGATPERVRQELLQHDLVTEELGGDVLAVEVSAKKRMNLERLEEAILLQAEVLDLKANPDRTAQGTVVEAKMEKGRGPVATVLVQKGTLKVGDVFVAGSEWGKVRALIDDKGHRVDEAGPSTPVEVLGLDGAPAAGDDFVAVEDEARAREIAGYRQRVEREARSKLAARGTLEQMFSAIKAGEAK------ELPVVVKGDVQGSVEAINGAL 302          
BLAST of mRNA_H-paniculata_contig16365.3641.1 vs. uniprot
Match: A0A7X5F5A9_9HYPH (Translation initiation factor IF-2 n=1 Tax=Pannonibacter sp. XCT-53 TaxID=2750085 RepID=A0A7X5F5A9_9HYPH)

HSP 1 Score: 345 bits (885), Expect = 2.600e-108
Identity = 185/312 (59.29%), Postives = 240/312 (76.92%), Query Frame = 1
Query:   31 GSISLLDAIRETKVVSGEAGGITQHISAYQVSTNAGSNVTFVDTPGHAAFGEMRARGANATDIVVLVVAADDGVMDQTKESIATARMASVPIVVAINKVDKPAADVQKVQNELMTFDLLPEEFGGDTQVAMVSAKQKTGLDELLEKILLQAEVLELKSNPNRMAQGVVIEAQMEKGMGTVGTILIQRGTLRVGDVFVAGGAWGKVRALMDHKGKRITEAGPSMPVQVGGFDGVPDAGEVFTVCEREDVARDLAEARRKIAREATAATLQGGLKSSVEAILSGEADTGKELFELPVMIKADVQGSEQALFNAL 966
            G  SLLDAIR +KVVSGEAGGITQHI AYQV  N G  +TF+DTPGHAAF +MRARGA ATDIV+LVVAADDGVM QTKE+I+ A+ A VPI+VAINK+DKP+AD  +V+ EL+  +++ E  GGDT    VSAK  T LD LLE +LLQAEVLEL++NP+R A+G+VIEAQ++KG G V T+L+Q+GTLRVGD+ VAGG WGKVRAL+D  G ++ EAGPS PV+V GF G P+AG++  V E E  AR++A+ R++  RE  A  ++ G ++S+E ++S     G++  E P++IKADVQGS +A+ +AL
Sbjct:  430 GKTSLLDAIRNSKVVSGEAGGITQHIGAYQVEKN-GQKITFIDTPGHAAFTQMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAAGVPIIVAINKIDKPSADPNRVRTELLHDEIVVESMGGDTIDVEVSAKVGTNLDRLLEMVLLQAEVLELRANPDRTAEGLVIEAQLDKGRGPVATVLVQKGTLRVGDILVAGGEWGKVRALLDEDGNQVKEAGPSKPVEVLGFQGTPEAGDMVAVVENESRAREIADYRQRQKREKLA-VVKAGTRASLEQMMSRLQSGGRK--EFPLVIKADVQGSAEAIAHAL 737          
BLAST of mRNA_H-paniculata_contig16365.3641.1 vs. uniprot
Match: W7T2T0_9STRA (Translation initiation factor if-2 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7T2T0_9STRA)

HSP 1 Score: 338 bits (868), Expect = 5.400e-108
Identity = 182/312 (58.33%), Postives = 236/312 (75.64%), Query Frame = 1
Query:   31 GSISLLDAIRETKVVSGEAGGITQHISAYQVSTNAGSNVTFVDTPGHAAFGEMRARGANATDIVVLVVAADDGVMDQTKESIATARMASVPIVVAINKVDKPAADVQKVQNELMTFDLLPEEFGGDTQVAMVSAKQKTGLDELLEKILLQAEVLELKSNPNRMAQGVVIEAQMEKGMGTVGTILIQRGTLRVGDVFVAGGAWGKVRALMDHKGKRITEAGPSMPVQVGGFDGVPDAGEVFTVCEREDVARDLAEARRKIAREATAATLQGGLKSSVEAILSGEADTGKELFELPVMIKADVQGSEQALFNAL 966
            G  SLLDA+RE+ V +GEAGGITQHI AYQV T+A   +TF+DTPGHAAF EMRARGAN TD+VVLVVAAD+GV +QT +SI  A+ A VPI++A+NKVDKP AD  +V  ELM +D+L EE+GGD   A VSAK++  LD LLEKILLQAE+L+LK+NPNR A G V+E++MEKG+G V T+L+Q+GTLRVGD  VAG A+GKVR+L D +GKR+  AGPS+P  + G+DGVP AG+   V E E  AR++AEARR++ RE + +   G +++ V +I     D  K+  E+ V+IKADVQGS +A+  A+
Sbjct:  205 GKTSLLDAVRESSVATGEAGGITQHIGAYQV-THAHRTITFIDTPGHAAFSEMRARGANVTDLVVLVVAADEGVKEQTIDSIRCAKQAHVPILLAVNKVDKPGADPSRVTQELMKYDVLLEEYGGDVLSAEVSAKKRLNLDGLLEKILLQAEILDLKANPNRSAVGAVVESRMEKGLGPVTTVLVQKGTLRVGDCIVAGAAYGKVRSLTDERGKRLETAGPSVPAVLSGWDGVPAAGDTLIVVESEMQARNVAEARRRLERERSGSATMGSMQAQVLSIFG--TDGVKKRQEVTVVIKADVQGSAEAIATAV 513          
BLAST of mRNA_H-paniculata_contig16365.3641.1 vs. uniprot
Match: A0A3B9RHG1_9CAUL (Translation initiation factor IF-2 (Fragment) n=1 Tax=Brevundimonas sp. TaxID=1871086 RepID=A0A3B9RHG1_9CAUL)

HSP 1 Score: 330 bits (847), Expect = 5.440e-108
Identity = 178/313 (56.87%), Postives = 235/313 (75.08%), Query Frame = 1
Query:   31 GSISLLDAIRETKVVSGEAGGITQHISAYQVSTNAGSNVTFVDTPGHAAFGEMRARGANATDIVVLVVAADDGVMDQTKESIATARMASVPIVVAINKVDKPAADVQKVQNELMTFDLLPEEFGGDTQVAMVSAKQKTGLDELLEKILLQAEVLELKSNPNRMAQGVVIEAQMEKGMGTVGTILIQRGTLRVGDVFVAGGAWGKVRALMDHKGKRITEAGPSMPVQVGGFDGVPDAGEVFTVCEREDVARDLAEARRKIAREATAATLQGGLKSSVEAILSGEADTG-KELFELPVMIKADVQGSEQALFNAL 966
            G  SLLDA+R T V  GEAGGITQHI AYQV    G  VTF+DTPGHAAF  MRARGAN TDIVVLVVAADDGVM QT E+I  A+ A  P++VA+NK+DKP A  QKV +EL+ ++++ E  GGDTQ+  VSAK++  LD LLE IL+QAEV++L++NP+R A+GVVIEA+++KG G VGT+L++RGTL+ GD+ VAGGAWGKVRAL++ + +++T+AGPS+PV++ G D  P  G+VF V + E  AR+L E R+++ RE   A + GG  S V+ +    A  G K++ ELPV+IKADVQGS +A+  +L
Sbjct:    8 GKTSLLDALRTTDVAGGEAGGITQHIGAYQVRLEDGQKVTFLDTPGHAAFSAMRARGANVTDIVVLVVAADDGVMPQTIEAIQHAKAAEAPLIVAVNKMDKPGATSQKVVSELLQYEVIAESLGGDTQIIEVSAKERMNLDGLLEAILVQAEVMDLRANPDRSAEGVVIEAKLDKGRGPVGTVLVKRGTLKRGDIVVAGGAWGKVRALLNERNEQLTDAGPSVPVEILGLDEAPSPGDVFAVVDSEARARELTEYRQRVKREK--AQVSGGSVSLVDMM----AKLGSKKINELPVVIKADVQGSGEAIAASL 314          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16365.3641.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJE9_ECTSI1.810e-17084.62PTIF2, plastid translation intiation factor 2 n=2 ... [more]
A0A835ZAQ9_9STRA4.840e-13768.79P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S3Y8J2_HETAK4.860e-12264.01Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2Y1F3_9STRA3.400e-11862.10Hypothetical protein n=2 Tax=Fibrocapsa japonica T... [more]
A0A7S3L358_9STRA8.000e-10958.86Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S2EJV6_TRICV1.150e-10860.83Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A4U0B1_9PROT1.900e-10858.77Translation initiation factor IF-2 n=1 Tax=Magneto... [more]
A0A7X5F5A9_9HYPH2.600e-10859.29Translation initiation factor IF-2 n=1 Tax=Pannoni... [more]
W7T2T0_9STRA5.400e-10858.33Translation initiation factor if-2 n=3 Tax=Monodop... [more]
A0A3B9RHG1_9CAUL5.440e-10856.87Translation initiation factor IF-2 (Fragment) n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16365contigH-paniculata_contig16365:1042..5473 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score515.4
Seed ortholog evalue1.9e-143
Seed eggNOG ortholog2880.D7FJE9
KEGG koko:K02519
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009941,GO:0031967,GO:0031975,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464
EggNOG free text desc.translation initiation factor activity
EggNOG OGsCOG0532@1,KOG1145@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03012,ko03029
Exons6
Model size972
Cds size972
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16365.3641.1prot_H-paniculata_contig16365.3641.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig16365 1042..5473 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929304.6999106-CDS-H-paniculata_contig16365:1041..11611622929304.6999106-CDS-H-paniculata_contig16365:1041..1161Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16365 1042..1161 +
1691480808.2722654-CDS-H-paniculata_contig16365:1041..11611691480808.2722654-CDS-H-paniculata_contig16365:1041..1161Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16365 1042..1161 +
1622929304.717436-CDS-H-paniculata_contig16365:2185..23891622929304.717436-CDS-H-paniculata_contig16365:2185..2389Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16365 2186..2389 +
1691480808.2837405-CDS-H-paniculata_contig16365:2185..23891691480808.2837405-CDS-H-paniculata_contig16365:2185..2389Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16365 2186..2389 +
1622929304.728281-CDS-H-paniculata_contig16365:3571..36611622929304.728281-CDS-H-paniculata_contig16365:3571..3661Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16365 3572..3661 +
1691480808.291756-CDS-H-paniculata_contig16365:3571..36611691480808.291756-CDS-H-paniculata_contig16365:3571..3661Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16365 3572..3661 +
1622929306.3311126-CDS-H-paniculata_contig16365:3860..40081622929306.3311126-CDS-H-paniculata_contig16365:3860..4008Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16365 3861..4008 +
1691480808.2997406-CDS-H-paniculata_contig16365:3860..40081691480808.2997406-CDS-H-paniculata_contig16365:3860..4008Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16365 3861..4008 +
1622929306.4541924-CDS-H-paniculata_contig16365:4701..49761622929306.4541924-CDS-H-paniculata_contig16365:4701..4976Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16365 4702..4976 +
1691480808.307463-CDS-H-paniculata_contig16365:4701..49761691480808.307463-CDS-H-paniculata_contig16365:4701..4976Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16365 4702..4976 +
1622929306.6974282-CDS-H-paniculata_contig16365:5338..54731622929306.6974282-CDS-H-paniculata_contig16365:5338..5473Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16365 5339..5473 +
1691480808.3153112-CDS-H-paniculata_contig16365:5338..54731691480808.3153112-CDS-H-paniculata_contig16365:5338..5473Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16365 5339..5473 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig16365.3641.1

>prot_H-paniculata_contig16365.3641.1 ID=prot_H-paniculata_contig16365.3641.1|Name=mRNA_H-paniculata_contig16365.3641.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=324bp
MSFDFLWCWRGSISLLDAIRETKVVSGEAGGITQHISAYQVSTNAGSNVT
FVDTPGHAAFGEMRARGANATDIVVLVVAADDGVMDQTKESIATARMASV
PIVVAINKVDKPAADVQKVQNELMTFDLLPEEFGGDTQVAMVSAKQKTGL
DELLEKILLQAEVLELKSNPNRMAQGVVIEAQMEKGMGTVGTILIQRGTL
RVGDVFVAGGAWGKVRALMDHKGKRITEAGPSMPVQVGGFDGVPDAGEVF
TVCEREDVARDLAEARRKIAREATAATLQGGLKSSVEAILSGEADTGKEL
FELPVMIKADVQGSEQALFNALR*
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mRNA from alignment at H-paniculata_contig16365:1042..5473+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig16365.3641.1 ID=mRNA_H-paniculata_contig16365.3641.1|Name=mRNA_H-paniculata_contig16365.3641.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4432bp|location=Sequence derived from alignment at H-paniculata_contig16365:1042..5473+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCGTTTGATTTTTTGTGGTGTTGGCGTGGATCGATCAGTTTGCTGGA TGCTATCCGCGAGACAAAGGTGGTCTCCGGGGAAGCGGGTGGGATCACGC AACACATCAGCGCCTACCAGGTATGTTTTACGCCCGTGTGTGTACAAACG ATTTTTTTATTTTATTTTATTTTTTTAACCGAGAAAGGTGCATGACGAGA TTTCTCCCCTCCCTTGCCCCCGTTTCTTGGATGTGGTTCTGTTGACTTGT AGATCGGGTCTTGTTCCCTTGAAAATTACCGTGTAAGGAGACATTACATC TTTTATTCTTTTTACCCTGAACATGAAGAAATTTTTATGATTCAGATACA TCGAGAGGGAAGTAGCTTAAGCCTTGAACACTTTTTACCGATATATCTTT TATTTTTGACAGCATAGACTTCCCCCTCCCTCCCCGTTGCTTCACCTCTT TTCCGTGCTCGAACAGCTTTTTGTACCCCGCATACCTTATGATGATTGTT GATGACTATATGTGGCCGTGATTAGGGGATATGTTTTTTTTTTTTTTAAT GAAAATAATCAGTTGATGAGATGGTTTGCAGAAATTGCAGCATGAAATTT ACGGTTTTTGGGACGTTGTTCTAAACGTGATTTTTTTTTTTTCCCCTCTT TTTCCTTGTGTTTTCCATTTTTACCAACATAATCTCAGCATGCTATCGGA AGAATTGAGGGTGTACAAATTTGATGTAAAATAGAAGATAAATAAAATAG AAAACACACACACACACACACACACACATGAAAAGAGAAGAAAACCAAAC AAAATAACTTTTTGAACGGCCCGTAGTGGCGGTTCTCGAGTTACATGCTT ATTTTATCATGTCTGTGTGGTAATGGACACGGTGGCCCACTGTCTCCCTG GCCGATGCTGTAGCCCCCCAGTTTAAGCCCCAAATCCACAGTTTTTTTGT GCGTTTTTTTTTTTTTTTGCGACTTGGTTTTGGTATGTACGCATATTTTT CATTTTGTCTCTTTGCATGTGAGATCGGGGCCTACTACAGTCCTTCCTTC TCCTGTTCTTTCTGTTTCCCAATCATATCAATCATATCAATCAGTTTATG TAATCTGTCCCGCTAATGACCCATCCCTACACACCGGTGACAAGGTGTCG ACGAACGCGGGCTCTAACGTGACCTTTGTTGACACGCCTGGGCACGCGGC ATTTGGCGAGATGCGCGCACGGGGAGCAAATGCTACCGACATCGTGGTTC TCGTGGTCGCTGCGGACGATGGCGTGATGGATCAGACCAAGGAGTCGATC GCCACAGCTAGGATGGCGAGCGTGCCAATTGTTGTGGCCATCAATAAGGT ACTTTCTCGTGTTTCAATTGAAGTCCATGACAATAATATCTATGTTGATG GTGACGATAAAAAGAGTAATATTATGATATGGAAGTCAACTATATCGACG AACAAGAATATTTATTTATATGTAACGTGATAATTGGAGTTTTTAAGAAG TTCGAGCGAATTACTGCGGCGTCAAGGATTTGGGTATTGTGCACTATGTA CCTACGCCCGAACGGGTAGGATAGCTCGTGAACTGAGCATGACTGAAAGT CTAGTCAGAGGTCTTTGAGTGGCAGAGGTCTTTTAGTGGGGTGCAACCCC CACACTGCCTACTTGGTTCGGCCGAACCGGGGTGGCGCCTACCCCGCAGA GGAATAAATAACTCTGTTCTGTTGAAGGAAATGTAGACATTGGTAAAATA CTCAAGTATGGAAGCATCGGATAAAGGTTTTTTGCCTCAGCCTTCCGAGG GTAAAAAAAAAAAAAACGTGCACTACGTGTATGTGCATGGTTTTGTTGTG TGAGGTATAGCCAGGGGGGTCTGAGTAACGCACATGGTGCAGGTACTGTA TTTAGGGTGAGTAGGACCTTTTTGTGGATTGAAGGTACGATTGTGTGTGG TACTTCTGGTTGTTGCTATCGACAAGGTGCTGTACCTTTTGTTCGGATTA TGGTGTCCAGGAAGAGCGTGAATGAGGGGCGGGGGGTGCCGAATGGTTTG GCAGAGGCTAACTAGTTGGATCGTGCGCCACATTGTTTTCTGGGAGGGGT TTGCCTTTGATGTTACTGCGGATGGTAGGTTCGTGAGGCCCGGTAACATA ATGGGCTATGTGTATGTGTAGTAAATAGGGTAATATGCTTAGCAGAGAGT AACTGTGCGACTGTAGTATCGCTTATACTGTTTGCATGGGGATTTTTTTA GTATAAAGATATTTCCTCAGTTGGTACAGTTACCGTACGTGTTGTTGTCG GTACTTCGTCGACCAGTCGTTCATTGCTGCATGCACTCCCCCCTTTTTGG TCATTATTTAATTATGTCGACAAGTTTACTACAACTGAAGGTTGGCGTCA GGTACATAACCTCAACAGGGGTATAACGGAGTAATTGTATGAGCCTTGGA GCTTAGTTTGTCCTCTTTCGTCTTTTTGTCTCCTTTCTGCGCCTTATTCC CTCTGTCTCGTCTGTCTGTCCGTCCCTCAGGTGGACAAGCCGGCGGCCGA CGTACAGAAAGTTCAAAACGAGCTGATGACGTTTGACCTTCTGCCGGAAG AATTCGGCGGCGACACTCAGGTATCATACGTCCAGCTTCACAACCTTGAT ATGATCTCTTGTGTAATTGAAAAAAAAAAGCACAAAATCAAATTATGAGA TAGGCCACGCACTTTTTTGTTATTTTCCTTTTGAAAAAAATTAGGCAGTT CGATGGCATATGCTCCCATGAAGTTAACTCCCCCTCCTATGCTACTGCTC CCATTGCCCTTGCGTGCAGGTGGCCATGGTTTCGGCGAAGCAAAAGACAG GCCTGGACGAGCTATTGGAGAAGATTCTTCTGCAGGCAGAGGTGCTGGAG CTCAAGTCCAACCCGAACCGCATGGCGCAGGGCGTTGTGATCGAGGCTCA GATGGAAAAAGGGATGGGTGAGTGTGTTTTCTAGCACCATCAAACATGTT TTTTTCCTCGTTTATGTATGTGTTTTGACTTACACGCTGTATTTACTACT GGAGCCCTGTCGTCTGTAAAGTGTAGGATAGGATAGAATGGGTATATATG GGGTAAACGTATGAGCCCCGCCGGGTAATGTATATGTATATATATGTATA TATATATATATACATTACGTTGTTACGAACGAAATACATGTGGTGAGTCA GGGTGGAGGTATATTTGGGTCAGTAGTATGTGGAATGGTACGCAATATGT ACGTCGTTATGGTGTATTGATGGGACACACCACAACATGCTGGGTAGATA GCGTTTTTTTTTTTTTTAACCCCCGGAAGGATGAGGCGAAAACCTTCACC GATGGCAGATAGCGTTGCTCTCAAACTTGACGAGACTTGAGACACGAAAT CAAGATCAGAAAAGTATTGCCGTCAAATGTGGTCGTAGACGTGTTGGTAT GGCGTGATGGAAAGCAATGAAGAAGTGCCCTCACGTGTTAACGCATTCAC AGCGCCCTTGGCCAAGCGGGTCCCCAATGGCTTACAGCAGGGCTACCGCT ACAAACCCTTAGTATAGCTACCCTCCCAAGTCTTGTTCATGCCTACTTCT ACTGCCTAGATCTTGTCTAATGGACCCCCCCCCCCCCCCTCCACCACCGA ACCTCTCCAGGAACGGTCGGAACGATCCTCATCCAGCGCGGAACGCTCCG TGTGGGCGATGTGTTTGTTGCCGGCGGGGCCTGGGGCAAGGTGCGCGCCT TGATGGACCACAAGGGTAAGCGGATCACCGAGGCCGGGCCCTCTATGCCC GTGCAGGTGGGCGGGTTCGACGGGGTGCCCGACGCGGGGGAGGTGTTTAC TGTCTGCGAGCGGGAAGATGTGGCTCGGGACTTGGCGGAGGCGAGGCGAA AGATTGCACGAGAGGCGACTGCGGCGACGTTACAGGTATGTGTCTGTGGT GGTGGTATGTGTCTGTGGGGACAGGGTTGAGTTCCCAAGATCCAACAAAC AATTCGTGTTTTATTCACTCGTGTTCTACAAAAGCTGTTTGGAAAAGGCT GAAACTTCCTTCGCAATGCCGCGACGTTCGCTGGGTGTGTATTAACCTCT TTGTGCGTCCGGTATGAAGTTGGCACGGTGTGTGCGTTCATATATATATA TATCTCTCTTACATGACTTGCGGGTGATGGCCTCTTTTTCGGCATCTGCT TTTCTCGTCTCTTCTCGTTTCGTGTCTTGACCACCTATCAAGATCTCTTT TTTGCTTTTGGTCGATTGTTTGATTATTTTTTTTGCGTGCGGCGCAGGGT GGGTTGAAGTCGAGCGTGGAGGCCATCCTGTCGGGCGAGGCCGATACTGG CAAGGAGCTGTTCGAGCTCCCCGTCATGATCAAGGCAGACGTTCAAGGGT CCGAGCAAGCTTTGTTCAATGCACTCAGGTGA
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Coding sequence (CDS) from alignment at H-paniculata_contig16365:1042..5473+

>mRNA_H-paniculata_contig16365.3641.1 ID=mRNA_H-paniculata_contig16365.3641.1|Name=mRNA_H-paniculata_contig16365.3641.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1944bp|location=Sequence derived from alignment at H-paniculata_contig16365:1042..5473+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCGTTTGATTTTTTGTGGTGTTGGCGTGGATCGATCAGTTTGCTGGA
TGCTATCCGCGAGACAAAGGTGGTCTCCGGGGAAGCGGGTGGGATCACGC
AACACATCAGCGCCTACCAGATGTCGTTTGATTTTTTGTGGTGTTGGCGT
GGATCGATCAGTTTGCTGGATGCTATCCGCGAGACAAAGGTGGTCTCCGG
GGAAGCGGGTGGGATCACGCAACACATCAGCGCCTACCAGGTGTCGACGA
ACGCGGGCTCTAACGTGACCTTTGTTGACACGCCTGGGCACGCGGCATTT
GGCGAGATGCGCGCACGGGGAGCAAATGCTACCGACATCGTGGTTCTCGT
GGTCGCTGCGGACGATGGCGTGATGGATCAGACCAAGGAGTCGATCGCCA
CAGCTAGGATGGCGAGCGTGCCAATTGTTGTGGCCATCAATAAGGTGTCG
ACGAACGCGGGCTCTAACGTGACCTTTGTTGACACGCCTGGGCACGCGGC
ATTTGGCGAGATGCGCGCACGGGGAGCAAATGCTACCGACATCGTGGTTC
TCGTGGTCGCTGCGGACGATGGCGTGATGGATCAGACCAAGGAGTCGATC
GCCACAGCTAGGATGGCGAGCGTGCCAATTGTTGTGGCCATCAATAAGGT
GGACAAGCCGGCGGCCGACGTACAGAAAGTTCAAAACGAGCTGATGACGT
TTGACCTTCTGCCGGAAGAATTCGGCGGCGACACTCAGGTGGACAAGCCG
GCGGCCGACGTACAGAAAGTTCAAAACGAGCTGATGACGTTTGACCTTCT
GCCGGAAGAATTCGGCGGCGACACTCAGGTGGCCATGGTTTCGGCGAAGC
AAAAGACAGGCCTGGACGAGCTATTGGAGAAGATTCTTCTGCAGGCAGAG
GTGCTGGAGCTCAAGTCCAACCCGAACCGCATGGCGCAGGGCGTTGTGAT
CGAGGCTCAGATGGAAAAAGGGATGGGTGGCCATGGTTTCGGCGAAGCAA
AAGACAGGCCTGGACGAGCTATTGGAGAAGATTCTTCTGCAGGCAGAGGT
GCTGGAGCTCAAGTCCAACCCGAACCGCATGGCGCAGGGCGTTGTGATCG
AGGCTCAGATGGAAAAAGGGATGGGAACGGTCGGAACGATCCTCATCCAG
CGCGGAACGCTCCGTGTGGGCGATGTGTTTGTTGCCGGCGGGGCCTGGGG
CAAGGTGCGCGCCTTGATGGACCACAAGGGTAAGCGGATCACCGAGGCCG
GGCCCTCTATGCCCGTGCAGGTGGGCGGGTTCGACGGGGTGCCCGACGCG
GGGGAGGTGTTTACTGTCTGCGAGCGGGAAGATGTGGCTCGGGACTTGGC
GGAGGCGAGGCGAAAGATTGCACGAGAGGCGACTGCGGCGACGTTACAGG
AACGGTCGGAACGATCCTCATCCAGCGCGGAACGCTCCGTGTGGGCGATG
TGTTTGTTGCCGGCGGGGCCTGGGGCAAGGTGCGCGCCTTGATGGACCAC
AAGGGTAAGCGGATCACCGAGGCCGGGCCCTCTATGCCCGTGCAGGTGGG
CGGGTTCGACGGGGTGCCCGACGCGGGGGAGGTGTTTACTGTCTGCGAGC
GGGAAGATGTGGCTCGGGACTTGGCGGAGGCGAGGCGAAAGATTGCACGA
GAGGCGACTGCGGCGACGTTACAGGGTGGGTTGAAGTCGAGCGTGGAGGC
CATCCTGTCGGGCGAGGCCGATACTGGCAAGGAGCTGTTCGAGCTCCCCG
TCATGATCAAGGCAGACGTTCAAGGGTCCGAGCAAGCTTTGTTCAATGCA
CTCAGGTGAGGTGGGTTGAAGTCGAGCGTGGAGGCCATCCTGTCGGGCGA
GGCCGATACTGGCAAGGAGCTGTTCGAGCTCCCCGTCATGATCAAGGCAG
ACGTTCAAGGGTCCGAGCAAGCTTTGTTCAATGCACTCAGGTGA
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