prot_H-paniculata_contig16336.3627.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig16336.3627.1
Unique Nameprot_H-paniculata_contig16336.3627.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length68
Homology
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BLAST of mRNA_H-paniculata_contig16336.3627.1 vs. uniprot
Match: A0A6H5LG27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LG27_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 8.360e-19
Identity = 46/64 (71.88%), Postives = 51/64 (79.69%), Query Frame = 0 
Query:    5 EEELEPEPYPPNLIRGVKVIKKSAAGIPGARRLYVHDDSIELFNPEKKRFRSQSKFFLISELTA 68
            EEE+EPEPYPPNL RGVKV K+S AG    RRLYV  D+IEL NPEK+ FRSQSK F +SELTA
Sbjct:   29 EEEMEPEPYPPNLERGVKVRKRSMAGKSEIRRLYVRGDTIELVNPEKRMFRSQSKIFPLSELTA 92
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BLAST of mRNA_H-paniculata_contig16336.3627.1 vs. uniprot
Match: D8LRB0_ECTSI (NB-ARC and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRB0_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 1.140e-18
Identity = 46/64 (71.88%), Postives = 51/64 (79.69%), Query Frame = 0 
Query:    5 EEELEPEPYPPNLIRGVKVIKKSAAGIPGARRLYVHDDSIELFNPEKKRFRSQSKFFLISELTA 68
            EEE+EPEPYPPNL RGVKV K+S AG    RRLYV  D+IEL NPEK+ FRSQSK F +SELTA
Sbjct:   29 EEEMEPEPYPPNLERGVKVRKRSMAGKSEIRRLYVRGDTIELVNPEKRMFRSQSKVFPLSELTA 92
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16336.3627.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LG27_9PHAE8.360e-1971.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRB0_ECTSI1.140e-1871.88NB-ARC and TPR repeat-containig protein n=1 Tax=Ec... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16336contigH-paniculata_contig16336:3638..4626 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16336.3627.1mRNA_H-paniculata_contig16336.3627.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig16336 3638..4627 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig16336.3627.1 ID=prot_H-paniculata_contig16336.3627.1|Name=mRNA_H-paniculata_contig16336.3627.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=68bp
TALEEEELEPEPYPPNLIRGVKVIKKSAAGIPGARRLYVHDDSIELFNPE
KKRFRSQSKFFLISELTA
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