prot_H-paniculata_contig1633.3626.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1633.3626.1
Unique Nameprot_H-paniculata_contig1633.3626.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length408
Homology
BLAST of mRNA_H-paniculata_contig1633.3626.1 vs. uniprot
Match: A0A6H5KET6_9PHAE (UV excision repair protein RAD23 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KET6_9PHAE)

HSP 1 Score: 293 bits (749), Expect = 2.960e-92
Identity = 233/434 (53.69%), Postives = 266/434 (61.29%), Query Frame = 0
Query:    1 MSRVVQVKTLKGETFSIDVAEEALISDVKAKISEVRGVDPSTQVLICAGKTLQDAATLAASLGTNGFLVLMVKTKRRAAPASIATSHPAAAAATPTXXXGASAASTAPTPPXAAVPSAXXQXXXXXXXPSQAAAVAAPAXXXXXXXXXXXXXXXXVDPAGVEQLVAMGFPEDQARAALQAAFNDVSRAAGYLMEGIPDQGMDRGVAAEGGQG------------------VGTMEDLLGAQAMAMGEEDDDGNEGEGGLMGM-MGEGNPLNFMRFHPQFDQLRDLVRESPAMLPQMLQQLGNESPELMEQINAHPDDFLRLMNEPPDAQGQAMMDMGLQGMMDAEEHDXXXXXGVEGLPAMGDAGTXXXXXXXRGQ---------ITVELTVEEEAQVSNLMAMVPGVGRDQVIEAFIACDKNVEMAANLLFEN 406
            M+R + VKTLKGE F IDVAEE+++SDVKAKI+EVRG DP+TQVLIC GKTL+D  +LA S+   GFLVLMVK  RRA P + A   PAA      XXX                   XX XXXXXXX           XXXXXXX         VDP  V+ L AMGFP DQA AAL+AAFNDVSRAA YLMEGIP    + G    GG                        E    A  +A              LMGM  GEGNPLNFMRFHPQFD+LR LVRE+PAMLPQ+LQ L  +SPEL+ +IN HPD FLRLMNEPPDA+GQA+M+MG++G+++  + +XXXXX             XXXXXXX            +TVELT EE+A V NLMAMVPG GRDQVIEAFIACDKN EMAANLLFEN
Sbjct:    1 MTRSLTVKTLKGEVFRIDVAEESVMSDVKAKIAEVRGHDPATQVLICGGKTLKDGDSLADSVAAGGFLVLMVK--RRANPVANAAPTPAAXXXXXXXXXXXXXXXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGANETLSVDPTNVDMLTAMGFPADQATAALRAAFNDVSRAASYLMEGIPH---NAGAGTGGGDARXXXXXXXXXXXXXXXXXXXXXEXXXXAAGLAQ------------ALMGMEAGEGNPLNFMRFHPQFDELRGLVRENPAMLPQVLQALATQSPELIGRINQHPDAFLRLMNEPPDAEGQAIMEMGVEGLLEGMDQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTVTVELTEEEDAAVQNLMAMVPGAGRDQVIEAFIACDKNAEMAANLLFEN 414          
BLAST of mRNA_H-paniculata_contig1633.3626.1 vs. uniprot
Match: A0A836CLA0_9STRA (UV excision repair protein RAD23 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLA0_9STRA)

HSP 1 Score: 153 bits (387), Expect = 9.400e-41
Identity = 99/244 (40.57%), Postives = 138/244 (56.56%), Query Frame = 0
Query:  167 MGFPEDQARAALQAAFNDVSRAAGYLMEGIPDQGMDRGVAAEGG---QGVGTMEDLLGAQAMA--MGEEDDDGNEGEGGLMGMMGEGNPLNFMRFHPQFDQLRDLVRESPAMLPQMLQQLGNESPELMEQINAHPDDFLRLMNEPPDAQGQAMMDMGLQGMMDAEEHDXXXXXGVEGLPAMGDAGTXXXXXXXRGQITVELTVEEEAQVSNLMAMVPGVGRDQVIEAFIACDKNVEMAANLLFE 405
            MGFPEDQ RAALQAAFN++  AA YLM G+PD       A +      GVG    ++ A  ++  MG+   D ++ E    G  G  NPL  +R+HPQF +LR+LV+ +PA LP+++Q +G +SPEL+  INAHP  F++LMN   D  G      G+ G  + E+ +     G +  P                  T  LT E+ A V  LMA+VP + R +VIEA+++CDKNVE A N+LF+
Sbjct:    1 MGFPEDQVRAALQAAFNNLEVAANYLMTGLPDFAAPDFEAHQPNIETSGVGGTVGIVPADILSGPMGDTLGDADDMEA-AQGFEGGANPLAALRYHPQFLELRELVQSNPAALPEIIQGIGEQSPELLNMINAHPQAFVQLMNSTGDDLGMEGDLEGVLGDEEGEQQESMDAGGSDQAP------------------TAALTAEDNAAVDQLMAIVPNMSRQRVIEAYLSCDKNVEYAMNMLFD 225          
BLAST of mRNA_H-paniculata_contig1633.3626.1 vs. uniprot
Match: G1XDD6_ARTOA (UV excision repair protein RAD23 n=6 Tax=Orbiliaceae TaxID=47021 RepID=G1XDD6_ARTOA)

HSP 1 Score: 131 bits (329), Expect = 1.330e-30
Identity = 134/446 (30.04%), Postives = 191/446 (42.83%), Query Frame = 0
Query:    1 MSRVVQV--KTLKGETFSIDVAEEALISDVKAKISEVRGVDPSTQVLICAGKTLQDAATLAA-SLGTNGFLVLMVKTKRRAAPASIATSHPAAAAATPTXXXGASAASTAPTPPXAAVPSAXXQXXXXXXXPSQAAAVAAPAXXXXXXXXXXXXXXXX-VDPAGVEQLVAMGFPEDQARAALQAAFNDVSRAAGYLMEGIPDQGMDRGVAAEGGQGVGTME------------------------------DLLGAQAMAMGEEDDDGNEGEGG-----LMGMMGEGNP-LNFMRFHPQFDQLRDLVRESPAMLPQMLQQLGNESPELMEQINAHPDDFLRLMNEPPDAQGQAMMDMGLQGMMDAEEHDXXXXXGVEGLPAMGDAGTXXXXXXXRGQITVELTVEEEAQVSNLMAMVPGVGRDQVIEAFIACDKNVEMAANLLFEN 406
            MS +V++  K LK E F+I+      IS VKA+I   +G +PST  LI +GK LQDA T+ + ++   GF+V MV   + A  AS ++S     AA P+    +S     P+ P A   S+          P+ A  VAA +                    + + Q+  MGFP     AA++AAFN+  RA  YLM GIP+        A+  +   T                                +L  A A            G GG     L  + G G   L+F+R +PQF QLR +++E P ML  +LQQ+G  +P+L + I+ +P+ FLRL+ E  D +  A    G                                     G + + +T EE   +  L  +  G  RD VI+A+ ACDKN EMAAN LFEN
Sbjct:    1 MSDIVKLTFKDLKNERFTIEAGTADTISTVKARIQTEKGWEPSTVKLIYSGKILQDAQTVGSYNIDEKGFIVCMVSKAKTAPKASSSSS-----AAAPSTPVKSSTPVQTPSAPIANAASSSTVPAAVPETPTPAPQVAATSQPTTAAFNDPSSLAMGSARESAILQMTEMGFPRPDVEAAMRAAFNNPDRAVEYLMTGIPEHLQREAPPAQSSRAPPTQPTTGAXXXXXXXXXXXXXXXXXXAADVDEPVNLFEAAAAQRSGSRGTPAGGRGGAAVNPLAALAGGGGANLDFLRNNPQFQQLRQVIQEHPQMLEPILQQVGQANPQLAQLISTNPEGFLRLLGEGIDEEELAGAAPG-------------------------------------GGLAIHVTEEERDAIERLCQL--GFERDVVIQAYFACDKNEEMAANFLFEN 402          
BLAST of mRNA_H-paniculata_contig1633.3626.1 vs. uniprot
Match: A0A484E264_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E264_BRELC)

HSP 1 Score: 132 bits (331), Expect = 1.400e-30
Identity = 164/468 (35.04%), Postives = 216/468 (46.15%), Query Frame = 0
Query:    7 VKTLKGETFSIDVAEEALISDVKAKISEVRGVDPSTQVLICAGKTLQDAATLAA-SLGTNGFLVLMVKTKRRAAPASIATSHPAAAAATPTXXXGASAASTAPTPPXAAVPSAXXQXXXXXXXPSQAAAVAAPAXXXXXXXXXXXXXXXXVDP--------AGVEQLVAMGFPEDQARAALQAAFNDVSRAAGYLMEGIPDQGMDRGVAAEGGQGVGTMEDLLGAQAMAMGEEDDDGNEGEGGLMGMMGEGNPLNFMRFHPQFDQLRDLVRESPAMLPQMLQQLGNESPELMEQINAHPDDFLRLMNEP-------------------------------------------PDAQGQAMMDMG-----LQGMMDAEEHDXXXXX-----------GVEGLPAMGDAGTXXXXXXXRGQITVELTVEEEAQVSNLMAMVPGVGRDQVIEAFIACDKNVEMAANLLFEN 406
            VKTL+G +F +D      +S VK KI E++    + Q LI AGK L+D +TLA  ++  N FLV+MV   +   P +I+ S   +++A       AS +S +  PP AAV S+   XXXXXXX           XXXXXXXXX                  A V+QL+ MGFPEDQ R AL+AAFN+  RA  YLM GIP Q   R   A    G+G           A GE+                  N L  +R HPQFD LR LV+ +PA LP +LQQ+G +SPEL+  I+ + D F++++NEP                                           P+ Q Q    MG     L+G+       XXXXX           G+EGL     AG+        G   + LT EE A V  L  M  G  R  VI+A++ACDKN  +AAN L ++
Sbjct:    5 VKTLQGVSFPLDAEPTNSVSAVKQKIEELQKFPVAQQKLIHAGKVLRDDSTLAEYNVKDNDFLVVMVTKPKAPKPTTISASTIDSSSA----ISFASTSSASMAPPTAAVASSITPXXXXXXXXXXXXXXXXXXXXXXXXXXXASSISRESSEIVTDEHMSASVQQLMDMGFPEDQVRGALRAAFNNPERAVEYLMTGIPAQAAVRPQTAAPSAGLG-----------ASGEDTT----------------NTLEALRNHPQFDALRQLVQSNPAALPAVLQQIGTQSPELLRLIHQNQDRFVQMLNEPISSRETGALPSSGAGAAPFEFGMGNGGAMPTPQQIQQLVDSLSPEQQTQMAAQMGMTPDQLRGLSQXXXXXXXXXXXXXXXXXGGSSGLEGLGGGTGAGS--------GSHRIMLTEEEAAAVDRLCEM--GFERTDVIQAYLACDKNEALAANFLMDS 431          
BLAST of mRNA_H-paniculata_contig1633.3626.1 vs. uniprot
Match: A0A7S4DGQ1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DGQ1_HETAK)

HSP 1 Score: 128 bits (321), Expect = 3.190e-29
Identity = 146/467 (31.26%), Postives = 198/467 (42.40%), Query Frame = 0
Query:    7 VKTLKGETFSIDVAEEALISDVKAKISEVRGVDPS-TQVLICAGKTLQDAATLA-ASLGTNGFLVLMVKTKR--RAAPA------SIATSHPAAAAATPTXXXGASAASTAPTPPXAAVPSAXXQXXXXXXXPSQAAAVAAPAXXXXXXXXXXXXXXXXVDPAGVEQLVAMGFPEDQARAALQAAFNDVSRAAGYLMEGIPDQGMDRGVAAEGGQGVGTMEDLLGAQAMAMGEEDDDGNEGEGGLMGMMGEGNPLNFMRFHPQFDQLRDLVRESPAMLPQMLQQLGNESPELMEQINAHPDDFLRLMNEPPDAQGQAMMD-----------------------------------MGLQGMMDAEEHDXXXXXGV-----------------EGLPAMGDAGTXXXXXXXRG----QITVELTVEEEAQVSNLMAMVPGVGRDQVIEAFIACDKNVEMAANLLFENM 407
            VKTL G+ FSID+ E    ++VK  I+E R   P+ TQ LI AGK L+D  TLA  ++G   F+V M K K+  RA+PA      +       AA  TP                             XXX          PA                 +P  V+QLV MGFPEDQ +AAL+AA  +   A  +LM GIP+ G+    AA G                             GG     G G+PL+ +R HPQ + L+ LV+ +P  L Q+LQQ+G +SPEL+  I+A+ ++F+R+MNEP D    A                                      M L  + +A+        G+                 E L  +  AG  XXXXXX G      T+ LT +E   V+ L  M  G  R+ V++A++ACDKN  MAANLL + M
Sbjct:    5 VKTLDGKNFSIDIEESKTFAEVKDAIAEARPDLPADTQKLIHAGKILKDDQTLAEVNIGATEFIVCMSKPKKPARASPAXXXXXXAXXXXXXXAAPVTP-----------------------------XXXQXXXXXXXXRPAGEAAATNTSTPAQSNYENPETVQQLVDMGFPEDQVKAALRAAMGNGDVAVEFLMNGIPE-GLPTNPAAAGAS--------------------------SGGAAASTGTGHPLDALRRHPQLNALKRLVQSNPGALQQVLQQIGAQSPELLATIHANQEEFVRMMNEPVDESAPAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPAIMARMMQLASLPEAQRAQVAQSLGIPADQLNQFVNLMRMMPPEQLQQIMAAGMGXXXXXXXGLPPGATTIRLTQDEADAVNRLCDM--GFNRNNVMQAYLACDKNEAMAANLLMDGM 413          
BLAST of mRNA_H-paniculata_contig1633.3626.1 vs. uniprot
Match: A0A8H4RQ14_9HELO (UV excision repair protein RAD23 n=1 Tax=Cudoniella acicularis TaxID=354080 RepID=A0A8H4RQ14_9HELO)

HSP 1 Score: 126 bits (316), Expect = 6.880e-29
Identity = 150/431 (34.80%), Postives = 202/431 (46.87%), Query Frame = 0
Query:    8 KTLKGETFSIDVAEEALISDVKAKISEVRGVDPSTQVLICAGKTLQDAATLAA-SLGTNGFLVLMVKTKRRAAPASIATSHPAAAAATPTXXXGASAASTAPTPPXAAVPSAXXQXXXXXXXPSQAAAVAAPAXXXXXXXXXXXXXXXXV----DPAGVEQLVAMGFPEDQARAALQAAFNDVSRAAGYLMEGIPD--QGMDRGVA-AEGGQ-------------GVGTMEDL----LGAQAMAMGEEDDDGNEGEGG-LMGMMGEG-------NPLNFMRFHPQFDQLRDLVRESPAMLPQMLQQLGNESPELMEQINAHPDDFLRLMNEPPDAQGQAMMDMGLQGMMDAEEHDXXXXXGVEGLPAMGDAGTXXXXXXXRGQITVELTVEEEAQVSNLMAMVPGVGRDQVIEAFIACDKNVEMAANLLFE 405
            K LK + F I+     LISDVK KIS+ +G + STQ LI +GK LQDA T+ +  +   GF+V M+  K +AAP S +TS P+ A +TP     A AA+      X     A          PS A + AA  XXXXXXXXX              A + ++ +MGF   Q   A++AAF +  RA  YL+ GIPD  Q   R  A A G Q             G G  E +      AQA A      D   G  G L G  G G         L+F+R +PQF QLR +V+++P ML  +LQQ+G  +P+L + I  HP+ FL+L++E  D    A +  G Q                                       + +T EE A +  L+ +  G  RDQ I+A+ ACDKN E+AAN LF+
Sbjct:    6 KDLKQQKFVIEAEPSELISDVKEKISKEKGWEASTQKLIYSGKILQDANTVESYKIEEKGFIVCMIS-KPKAAP-SASTSTPSKAPSTP-----APAAAXXXXXXXXXXXVASSSANVVPATPSPAGSGAAXXXXXXXXXXXGTASSGLAMGAERAAQIAEMESMGFERSQIDLAMRAAFYNSERAIEYLLTGIPDNVQQEQRPTAPAPGAQXXXXXXXXXXXXXGDGGEEPINLFEAAAQAGAXXRGGADAARGAAGNLFGAAGVGAGAAAGLGNLDFLRNNPQFQQLRQVVQQNPQMLEPILQQVGAGNPQLAQLIGQHPEQFLQLLSE--DGDNDAPLPPGAQA--------------------------------------ISVTEEERAAIERLVLL--GFPRDQAIQAYFACDKNEELAANFLFD 387          
BLAST of mRNA_H-paniculata_contig1633.3626.1 vs. uniprot
Match: A0A2A2LV78_9BILA (UV excision repair protein RAD23 n=2 Tax=Diploscapter pachys TaxID=2018661 RepID=A0A2A2LV78_9BILA)

HSP 1 Score: 125 bits (313), Expect = 1.390e-28
Identity = 126/410 (30.73%), Postives = 190/410 (46.34%), Query Frame = 0
Query:    5 VQVKTLKGETFSIDVAEEALISDVKAKISEVRGVDPSTQV--LICAGKTLQDAATL-AASLGTNGFLVLMVKTKRRAAPASIATSHPAAAAATPTXXXGASAASTAPTPPXAAVPSAXXQXXXXXXXPSQAAAVAAPAXXXXXXXXXXXXXXXXVDPAGVEQLVAMGFPEDQARAALQAAFNDVSRAAGYLMEGIPDQGMDRGVAAEGGQGVGTMEDLLGAQAMAMGEEDDDGNEGEGGLMGMMGEGNPLNFMRFHPQFDQLRDLVRESPAMLPQMLQQLGNESPELMEQINAHPDDFLRLMNEPP----DAQGQAMMDMGLQGMMDAEEHDXXXXXGVEGLPAMGDAGTXXXXXXXRGQITVELTVEEEAQVSNLMAMVPGVGRDQVIEAFIACDKNVEMAANLLFENM 407
            V  KTLK E+F +++     I DVK KI+E RG D + ++  LI  GK L D  T+ +A L    F+V+M+  K++  PA   T+    AAA PT     SA S  P+ P    P+                 VAAPA                   + ++ +  MG+P +Q  AALQAAF +  RA  YL+ GIPD+           Q +   E   GA+A    E  +   EGEGG +G       L ++R +PQ ++LR L++ +PA+L  + QQ+   +PEL+  I ++P +FL ++NEP      A G+   +    G    +         ++                 RG I V LT  E+  +  + +M   V    ++EA++ACDKN EMA   + +NM
Sbjct:    6 VTFKTLKQESFKLELMPSDNIGDVKKKIAETRGEDYAVELQKLIYNGKILNDTDTVESAGLDPQKFVVVMLSAKKK--PAEPETT----AAAEPT-----SAESATPSVP----PTTPIYKGGTESTSDATPQVAAPAQVAPNAPARAASNLTAEQNSQIDAISGMGYPREQVVAALQAAFWNSDRAVEYLLTGIPDE-----------QQLAAGEFQAGAEA----EHIEGSEEGEGGDLG------DLAYLRSNPQINELRRLIQGNPALLNDVFQQISAVNPELLNAIQSNPAEFLSMLNEPVVDENPAAGRGEGNAPAGGQQQGKNIAIFFRRFLKSY-------CDFLEPPVRGHI-VRLTPAEQEAIQRIKSMGFRVPDAAIVEAYLACDKNEEMAIQYILDNM 371          
BLAST of mRNA_H-paniculata_contig1633.3626.1 vs. uniprot
Match: H3G763_PHYRM (UV excision repair protein RAD23 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G763_PHYRM)

HSP 1 Score: 123 bits (309), Expect = 3.330e-28
Identity = 154/435 (35.40%), Postives = 195/435 (44.83%), Query Frame = 0
Query:    7 VKTLKGETFSIDVAEEALISDVKAKISEVRGVDPSTQVLICAGKTLQDAATLAA-SLGTNGFLVLMVKTKRRAAPASIATSHPAAAAATPTXXXGASAASTAPTPPXAAVPSAXXQXXXXXXXPSQAAA------------------------VAAPAXXXXXXXXXXXXXXXXVDPAG----------VEQLVAMGFPEDQARAALQAAFNDVSRAAGYLMEGIPDQGMDRGVAAEGGQGVGTMEDLLGAQAMAMGEEDDDGNEGEGGLMGMMGEGNPLNFMRFHPQFDQLRDLVRESPAMLPQMLQQLGNESPELMEQINAHPDDFLRLMNEP---PDAQGQAMMDMGLQGMMDAEEHDXXXXXGVEGLPAMGDAGTXXXXXXXRGQITVELTVEEEAQVSNLMAMVPGVGRDQVIEAFIACDKNVEMAANLL 403
            VKTL+G  FS+D      +S VK KI +++    S Q LI AGK L+D +TLA  ++  N FLV+MV TK +AA                                  A PSAXX XXXXXXX    AA                           PA   XXXXXXXXXXXXX D +G          V+QLV MGFPEDQ R+AL+AAFN+  RA  YLM GIP+Q       A    G   +    G +                         N L  +R HPQFD LR LV+ +PA LP +LQQ+G +SPEL+  I+ + D F++++NEP    +A G A                          P +G            G   + L+ EE A V  L  M  G  R  VI+A++ACDKN  +AAN L
Sbjct:    9 VKTLQGVAFSLDAELTDAVSAVKQKIEQLQSFPASQQKLIHAGKVLKDDSTLAEYNVKENDFLVVMV-TKPKAA----------------------------------AKPSAXXXXXXXXXXXXXVAAPXXXXXXXXXXXXXXXXXXXXXXXXTXPAVSTXXXXXXXXXXXXXXDGSGLVAGEQMSATVQQLVDMGFPEDQVRSALRAAFNNPERAVEYLMSGIPEQPAAPPQTAAPSAGADAVTSATGDETT-----------------------NTLEALRNHPQFDALRQLVQSNPAALPAVLQQIGAQSPELLRLIHQNQDRFVQMLNEPIGTREASGSA--------------------------PRLGGGA-----GAGAGGHRIMLSEEEAAAVDRLCEM--GFERTDVIQAYLACDKNEALAANFL 352          
BLAST of mRNA_H-paniculata_contig1633.3626.1 vs. uniprot
Match: A0A0D1ZX00_9PEZI (UV excision repair protein RAD23 n=1 Tax=Verruconis gallopava TaxID=253628 RepID=A0A0D1ZX00_9PEZI)

HSP 1 Score: 122 bits (305), Expect = 1.710e-27
Identity = 128/420 (30.48%), Postives = 186/420 (44.29%), Query Frame = 0
Query:    8 KTLKGETFSIDVAEEALISDVKAKISEVRGVDPSTQVLICAGKTLQDAATLAA-SLGTNGFLVLMVKTKRRAAPASIATSHPAAAAATPTXXXGASAASTAPTPPXAAVPSAXXQXXXXXXXPSQAAAVAAPAXXXXXXXXXXXXXXXXVDPAGVEQLVAMGFPEDQARAALQAAFNDVSRAAGYLMEGIPDQ--------GMDRGVAAEGGQGVGTME----------DLLGAQAMAMGEEDDDGNEGEGGLMGMMGE---GNPLNFMRFHPQFDQLRDLVRESPAMLPQMLQQLGNESPELMEQINAHPDDFLRLMNEPPDAQGQAMMDMGLQGMMDAEEHDXXXXXGVEGLPAMGDAGTXXXXXXXRGQITVELTVEEEAQVSNLMAMVPGVGRDQVIEAFIACDKNVEMAANLLFE 405
            K LK + F I+    A I+++KAK+ + +G + STQ LI +GK LQD  T+ + ++   GF+V M + K R+AP+  A+S  A   +TP             + P ++ P A          P   A  +                      A +  + AMGFP +Q  AA+ AAF +  RA  YL+ GIPD          + RG AA  G+ + +            +L  A A A       GN G GG  G       G  L+F+R +PQF QLR +V++ P ML  +LQQ+G  +P+L   I   P++FLRL+                     AE+H          LP               G   +++T EE   +  L  +  G  RD VI+A+ ACDKN E+AAN LF+
Sbjct:    6 KDLKQQKFVIEAEPSATIAELKAKVEKEKGWESSTQKLIYSGKILQDDKTIESYNIQEKGFVVCMTQ-KPRSAPS--ASSSSAVLPSTPAQH----------SVPTSSAPLAPQVVPSSTTIPDHPATPSPAPAATQERRSDGMVLSSSEREAAIASMEAMGFPREQIEAAMIAAFYNPDRAVEYLLNGIPDNLRRDHPAGNLPRGSAA--GEAITSPSSAVPSSDEPVNLFEAAAHA-----GQGNRG-GGTTGRGSTAITGGNLDFLRNNPQFQQLRQIVQQQPQMLEPILQQVGAGNPQLAAMIAERPEEFLRLL---------------------AEDHGDDDAA----LPP--------------GAQAIQVTEEEREAIERLCRL--GFERDLVIQAYFACDKNEELAANFLFD 363          
BLAST of mRNA_H-paniculata_contig1633.3626.1 vs. uniprot
Match: A0A7C8Z7R0_OPUST (Ubiquitin receptor RAD23 n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C8Z7R0_OPUST)

HSP 1 Score: 121 bits (304), Expect = 2.200e-27
Identity = 127/418 (30.38%), Postives = 177/418 (42.34%), Query Frame = 0
Query:    7 VKTLKGETFSIDVAEEALISDVKAKISEVRGVDP---STQVLICAGKTLQDAATLAASLGT-NGFLVLMVKTKRRAAPASIATSHPAAAAATPTXXXGASAASTAPTPPXAAVPSAXXQXXXXXXXPSQAAAVAAPAXXXXXXXXXXXXXXXXVDPAGVEQLVAMG---FPEDQARAALQAAFNDVSRAAGYLMEGIPDQG-----------MDRGVAAEGGQGVGTMEDLLGAQAMAMGEEDDDGNEGEGGLMGMMGEGNPLNFMRFHPQFDQLRDLVRESPAMLPQMLQQLGNESPELMEQINAHPDDFLRLMNEPPDAQGQAMMDMGLQGMMDAEEHDXXXXXGVEGLPAMGDAGTXXXXXXXRGQITVELTVEEEAQVSNLMAMVPGVGRDQVIEAFIACDKNVEMAANLLFEN 406
            VKTLKG  F I V     +  VK  I +V+G D      Q+LI  GK L+D  TLA +  T +GFLV+M+   +  +    +++ PA               S APT   +A      Q        S A +  APA                     V+QLV MG   +  D    AL+AA+N+  RA  YL  GIP                   AAEGG     +     +  + M  ++   + G GGL         L+F+R + QF  LR +V+ +P +L  MLQ+LG ++P+L+  I  H  +FL+L+NEP D     M D   Q M  A                                  + +T EE+  +  L AM  G  R  VIEAF+ACD+N E+AAN L E+
Sbjct:    5 VKTLKGSHFEIRVQPNDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLAENKVTEDGFLVVMLSKSKTLSAGGTSSAQPAP--------------SVAPTTNTSAASQPEPQIASKAATGSSAPSSNAPADTYGQAASNLVSGDGLEQT--VQQLVDMGGGSWDRDTVVRALRAAYNNPERAVDYLYSGIPQTAEVAVAVPQFPSSQTNTAAEGGTAPAPVSGAPNSSPLNMFPQESLADAGVGGL-------GSLDFLRNNQQFQALRSMVQTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLLNEPLDGSEGDMFDQPDQDMPHA----------------------------------ISVTQEEQEAIERLEAM--GFDRALVIEAFLACDRNEELAANYLLEH 363          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1633.3626.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KET6_9PHAE2.960e-9253.69UV excision repair protein RAD23 n=2 Tax=Ectocarpu... [more]
A0A836CLA0_9STRA9.400e-4140.57UV excision repair protein RAD23 n=1 Tax=Tribonema... [more]
G1XDD6_ARTOA1.330e-3030.04UV excision repair protein RAD23 n=6 Tax=Orbiliace... [more]
A0A484E264_BRELC1.400e-3035.04Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A7S4DGQ1_HETAK3.190e-2931.26Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A8H4RQ14_9HELO6.880e-2934.80UV excision repair protein RAD23 n=1 Tax=Cudoniell... [more]
A0A2A2LV78_9BILA1.390e-2830.73UV excision repair protein RAD23 n=2 Tax=Diploscap... [more]
H3G763_PHYRM3.330e-2835.40UV excision repair protein RAD23 n=1 Tax=Phytophth... [more]
A0A0D1ZX00_9PEZI1.710e-2730.48UV excision repair protein RAD23 n=1 Tax=Verruconi... [more]
A0A7C8Z7R0_OPUST2.200e-2730.38Ubiquitin receptor RAD23 n=1 Tax=Opuntia streptaca... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004806UV excision repair protein Rad23PRINTSPR01839RAD23PROTEINcoord: 277..299
score: 42.49
coord: 394..407
score: 43.75
coord: 360..376
score: 29.41
coord: 379..393
score: 46.97
IPR004806UV excision repair protein Rad23TIGRFAMTIGR00601TIGR00601coord: 5..406
e-value: 1.4E-67
score: 226.5
IPR006636Heat shock chaperonin-bindingSMARTSM00727CBMcoord: 249..292
e-value: 0.0071
score: 25.6
IPR000626Ubiquitin domainSMARTSM00213ubq_7coord: 3..73
e-value: 1.6E-9
score: 47.6
IPR000626Ubiquitin domainPFAMPF00240ubiquitincoord: 5..74
e-value: 3.2E-12
score: 46.0
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 5..78
score: 14.513
IPR015940Ubiquitin-associated domainSMARTSM00165uba_6coord: 366..405
e-value: 8.0E-7
score: 38.7
coord: 157..194
e-value: 1.3E-9
score: 47.9
IPR015940Ubiquitin-associated domainPFAMPF00627UBAcoord: 365..403
e-value: 2.0E-8
score: 33.9
coord: 160..192
e-value: 8.1E-10
score: 38.4
IPR015940Ubiquitin-associated domainPROSITEPS50030UBAcoord: 155..195
score: 13.896
IPR015940Ubiquitin-associated domainPROSITEPS50030UBAcoord: 363..406
score: 10.041
IPR015360XPC-binding domainPFAMPF09280XPC-bindingcoord: 251..306
e-value: 2.1E-20
score: 72.2
NoneNo IPR availableGENE3D3.10.20.90coord: 4..74
e-value: 6.2E-16
score: 59.9
NoneNo IPR availableGENE3D1.10.8.10coord: 140..203
e-value: 2.3E-15
score: 58.0
NoneNo IPR availableGENE3D1.10.8.10coord: 356..407
e-value: 1.6E-17
score: 65.2
NoneNo IPR availablePANTHERPTHR10621UV EXCISION REPAIR PROTEIN RAD23coord: 6..405
NoneNo IPR availablePANTHERPTHR10621:SF0AT15685P-RELATEDcoord: 6..405
IPR036353XPC-binding domain superfamilyGENE3D1.10.10.540coord: 243..307
e-value: 2.9E-22
score: 80.0
IPR036353XPC-binding domain superfamilySUPERFAMILY101238XPC-binding domaincoord: 247..313
IPR009060UBA-like superfamilySUPERFAMILY46934UBA-likecoord: 356..407
IPR009060UBA-like superfamilySUPERFAMILY46934UBA-likecoord: 143..198
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 5..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1633contigH-paniculata_contig1633:6601..22703 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1633.3626.1mRNA_H-paniculata_contig1633.3626.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1633 6344..23404 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1633.3626.1 ID=prot_H-paniculata_contig1633.3626.1|Name=mRNA_H-paniculata_contig1633.3626.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=408bp
MSRVVQVKTLKGETFSIDVAEEALISDVKAKISEVRGVDPSTQVLICAGK
TLQDAATLAASLGTNGFLVLMVKTKRRAAPASIATSHPAAAAATPTTSSG
ASAASTAPTPPTAAVPSAAPQTAPAPPTPSQAAAVAAPAAAAAPVAAAAP
AAAAAVDPAGVEQLVAMGFPEDQARAALQAAFNDVSRAAGYLMEGIPDQG
MDRGVAAEGGQGVGTMEDLLGAQAMAMGEEDDDGNEGEGGLMGMMGEGNP
LNFMRFHPQFDQLRDLVRESPAMLPQMLQQLGNESPELMEQINAHPDDFL
RLMNEPPDAQGQAMMDMGLQGMMDAEEHDDDDDGGVEGLPAMGDAGTGAG
GAGGRGQITVELTVEEEAQVSNLMAMVPGVGRDQVIEAFIACDKNVEMAA
NLLFENM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004806Rad23
IPR006636STI1_HS-bd
IPR000626Ubiquitin_dom
IPR015940UBA
IPR015360XPC-bd
IPR036353XPC-bd_sf
IPR009060UBA-like_sf
IPR029071Ubiquitin-like_domsf