prot_H-paniculata_contig16319.3622.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig16319.3622.1
Unique Nameprot_H-paniculata_contig16319.3622.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length219
Homology
BLAST of mRNA_H-paniculata_contig16319.3622.1 vs. uniprot
Match: D8LP08_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP08_ECTSI)

HSP 1 Score: 229 bits (584), Expect = 2.430e-72
Identity = 126/182 (69.23%), Postives = 143/182 (78.57%), Query Frame = 0
Query:   39 HHNEDFLFEQKLESVKAGLLCGGVAAVVRLLAVGAGAITPA-LVREVLDAPDAAASSVLFGVASGFAQGALFGLTYRYVVRSDRDTQGTITSTSXXXXXXXKKKNEPQMDGFTVSHLGDGCVAAFAITSALGQSEAPLSLAAGEFLNVFGRGGGLLEALAAVLLPALPFLPRAVGDLLLYSA 219
            HH+ DFLFEQKLESV+A +LCG V A  RLLAVGAGA+ P  L+RE L AP+ A SS+LFG+A+GFAQGALFGLTYRYVVRSDR+   + T+              PQMDGFTV HLGDGCVAAFA+TSALGQSEAPL+LAAGEF+ V  RGGG+LEALAAVLLPA PFLPRA  DL LYS+
Sbjct:   68 HHDSDFLFEQKLESVRAAVLCGSVGAASRLLAVGAGALLPGGLLREALAAPEPAGSSLLFGLAAGFAQGALFGLTYRYVVRSDREQSPSATTGEPPV---------PQMDGFTVGHLGDGCVAAFALTSALGQSEAPLTLAAGEFVRVLWRGGGILEALAAVLLPAAPFLPRAAADLFLYSS 240          
BLAST of mRNA_H-paniculata_contig16319.3622.1 vs. uniprot
Match: A0A6H5KWW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWW8_9PHAE)

HSP 1 Score: 224 bits (570), Expect = 4.970e-69
Identity = 124/180 (68.89%), Postives = 140/180 (77.78%), Query Frame = 0
Query:   41 NEDFLFEQKLESVKAGLLCGGVAAVVRLLAVGAGAITPA-LVREVLDAPDAAASSVLFGVASGFAQGALFGLTYRYVVRSDRDTQGTITSTSXXXXXXXKKKNEPQMDGFTVSHLGDGCVAAFAITSALGQSEAPLSLAAGEFLNVFGRGGGLLEALAAVLLPALPFLPRAVGDLLLYSA 219
            + DFLFEQKLESV+A +LCG V A  RLLAVGAG + P  L RE L AP+ A SS+LFG+A+GFAQGALFGLTYRYVVRSDR+   + T+              PQMDGFTV HLGDGCVAAFA+TSALGQSEAPL+LAAGEF+ V GRGGG+LEALAAVLLPA PFLPRA  DL LY+A
Sbjct:  162 DSDFLFEQKLESVRAAVLCGSVGATSRLLAVGAGGLLPGGLFREALAAPEPAGSSLLFGLAAGFAQGALFGLTYRYVVRSDREQSPSATTGEPPV---------PQMDGFTVGHLGDGCVAAFALTSALGQSEAPLTLAAGEFVGVLGRGGGILEALAAVLLPAAPFLPRAAADLFLYTA 332          
BLAST of mRNA_H-paniculata_contig16319.3622.1 vs. uniprot
Match: A0A7S3URH4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3URH4_HETAK)

HSP 1 Score: 53.1 bits (126), Expect = 2.860e-5
Identity = 47/133 (35.34%), Postives = 64/133 (48.12%), Query Frame = 0
Query:   73 AGAITPALVREVLDAPDAAASSVLFGVASGFAQGALFGLTYRYVVRSDRDTQGTITSTSXXXXXXXKKKNEPQMDGFTVSHLGDGCVAAFAITSALGQSEAPLSLAAGEF----------LNVFGRGGGLLEA 195
            A A+ P+L+   L A  A+A++ L  +  G A+GALFGL YRYVVR D                    + +P + GF+V  LGDG V++FA+TS L  ++  L   A  F          L     GGG L A
Sbjct:    7 AAALNPSLL---LVARPASAAADLVALGGGAAEGALFGLLYRYVVRGDLT------------------RPDPGL-GFSVKQLGDGVVSSFALTSVLAHNQENLVKVAEVFVLSLPTAISDLTSVPEGGGALAA 117          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16319.3622.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LP08_ECTSI2.430e-7269.23Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KWW8_9PHAE4.970e-6968.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3URH4_HETAK2.860e-535.34Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 90..111
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 79..89
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 112..219
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..54
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 55..78
NoneNo IPR availableTMHMMTMhelixcoord: 58..80
NoneNo IPR availableTMHMMTMhelixcoord: 15..37
NoneNo IPR availableTMHMMTMhelixcoord: 95..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16319contigH-paniculata_contig16319:119..1297 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16319.3622.1mRNA_H-paniculata_contig16319.3622.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig16319 119..1297 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig16319.3622.1 ID=prot_H-paniculata_contig16319.3622.1|Name=mRNA_H-paniculata_contig16319.3622.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=219bp
MKQDVDESAQSSPTIPTIPVTTTTATTASAAPAAGVVVHHNEDFLFEQKL
ESVKAGLLCGGVAAVVRLLAVGAGAITPALVREVLDAPDAAASSVLFGVA
SGFAQGALFGLTYRYVVRSDRDTQGTITSTSTTNTTTNKKKNEPQMDGFT
VSHLGDGCVAAFAITSALGQSEAPLSLAAGEFLNVFGRGGGLLEALAAVL
LPALPFLPRAVGDLLLYSA
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